Neogale vison (American mink): 122908720
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Entry
122908720 CDS
T08764
Symbol
USP13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nvs01002
]
122908720 (USP13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nvs04121
]
122908720 (USP13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nvs04147
]
122908720 (USP13)
Enzymes [BR:
nvs01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122908720 (USP13)
Peptidases and inhibitors [BR:
nvs01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122908720 (USP13)
Ubiquitin system [BR:
nvs04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122908720 (USP13)
Exosome [BR:
nvs04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122908720 (USP13)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA_7
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_4
UBA_9
UBA_3
UBA_HYPK
UBA_8
Motif
Other DBs
NCBI-GeneID:
122908720
NCBI-ProteinID:
XP_044107771
LinkDB
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Position
6:103003544..103115930
Genome browser
AA seq
863 aa
AA seq
DB search
MQRRGALFGMPGGSGSRKMAAGDIGELLVPHMPTIRVPRSGDRVYKNECAFSYDSPNSEG
GLYVCMNTFLAFGREHVERHFRKTGQSVYMHLKRHVREKVRGASGGALPKRRNSKIFLDL
DTDDDLNSDDYEYEDEAKLVIFPDHYEIALPNIEELPALVTIACDAVLSSKSPYRKQDPD
TWENELPVSKYANNLTQLDNGVRIPPSGWKCARCDLRENLWLNLTDGSVLCGKWFFDSSG
GNGHALEHYRDMGYPLAVKLGTITPDGADVYSFQEEEPVLDPHLAKHLAHFGIDMLHMHG
TENGLRDNDIKPRVSEWEVIQETGTKLKPMYGPGYTGLKNLGNSCYLSSVMQAIFSIPEF
QRAYVGNLPRIFDYSPLDPTQDFNTQMTKLGHGLLSGQYSKPPVKSELIEQVMKEEHKPQ
QNGISPRMFKAFVSKSHPEFSSNRQQDAQEFFLHLVNLVERNRIGSENPSDVFRFLVEER
IQCCQTRKVRYTERVDYLMQLPVAMEAATNKDELIAYELTRREAEANRRPLPELVRAKIP
FSACLQAFSEPENVDDFWSSALQAKSAGVKTSRFASFPEYLVVQIKKFTFGLDWVPKKFD
VSIDMPDLLDINHLRARGLQPGEEELPDISPPIVIPDDSKDRLMNQLIDPSDIDESSVMQ
LAEMGFPLEACRKAVYFTGNMGAEVAFNWIIVHMEEPDFAEPLTMPGYGGAASAGASVFG
ATGLDNQPPEEIVAIITSMGFHRNQAVQALRATNNNLERALDWIFSHPEFEEDSDFVIEM
ENNANANIISEAKPEGPRVKDGSGMYELFAFISHMGTSTMSGHYVCHIKKEGRWVIYNDH
RVCASERPPKDLGYMYFYHRVPR
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgccggggcgccctgttcggcatgccgggcggcagcggcagcaggaagatggct
gcaggagacatcggcgagctgctggtgcctcacatgcccacgatccgcgtgcccaggtcg
ggggacagggtgtacaagaacgagtgcgccttctcgtacgactcccccaactctgaaggt
ggactctatgtatgcatgaatacatttttggcctttggaagggaacatgttgaaagacat
tttcgaaaaactggacagagtgtatacatgcacctgaaaagacacgtgcgagagaaggta
agaggggcatctggtggagcattaccaaaaaggaggaattccaagatttttttagatcta
gatactgatgacgatttaaatagcgacgattatgaatatgaagacgaagccaaacttgtt
atattcccagaccactatgaaatagcactaccaaatattgaggagttaccagccctggta
acaattgcttgtgatgcggttctcagctcaaaatctccatatagaaagcaggacccagac
acatgggaaaatgaattgccagtatccaaatatgccaataatcttacccagttggacaac
ggagtcaggattcctccaagtggttggaagtgtgccaggtgtgacctgcgggaaaacctc
tggttgaatctgactgatggctctgtgctgtgtgggaagtggttctttgacagctctgga
ggcaacggccatgcgttggagcattacagagacatgggctatcctctggctgtgaagctg
ggaaccattactcctgatggggcagatgtttattcttttcaagaagaggaacccgttttg
gatcctcatttggccaagcacttagcacattttggaattgatatgcttcatatgcatggg
acggagaacgggcttcgggacaatgacatcaagccgcgggtcagcgagtgggaagtgatc
caggagaccgggacaaagctgaagcccatgtatggccctgggtacacgggtctcaagaac
ctgggcaacagctgctacctgagttctgtcatgcaggccatcttcagcatcccagaattc
cagagagcgtatgtaggaaatcttccaagaatatttgactactctcctttagatccaaca
caggacttcaacacacagatgactaagttaggacatggccttctctcgggccagtattca
aaacctccagtgaaatctgagctcattgaacaggtgatgaaggaggaacacaagcctcaa
cagaatgggatctctccacgcatgtttaaggcctttgtgagcaagagccatccggagttc
tcctctaacagacagcaggatgcccaggagtttttcttgcacctggtgaatctagtagag
aggaaccgcattggctcagaaaacccaagcgatgtttttcggtttttggtagaagaacgc
attcagtgctgtcagacacgaaaagttcgctacacggagagggtggattacctgatgcag
ttacctgtggccatggaggcagcaacgaacaaggatgaactgattgcctatgagttaacg
agaagggaagcagaagcaaacagaagaccccttcccgagttggttcgtgccaagatacca
tttagtgcctgccttcaggccttttctgaaccagaaaacgtagatgatttctggagcagc
gccctacaagcaaaatctgcgggtgtgaaaacatctcgctttgcctcattccctgaatac
ttggtagtgcagataaagaagttcacttttggtcttgactgggttcccaaaaaatttgat
gtttctattgatatgccagacctacttgatatcaatcatctccgagccagggggttacag
ccaggagaagaggaacttccggacatcagcccccctatagtcattcctgatgactcaaaa
gatcgcctgatgaaccaactgatagacccctcggacattgatgagtcatcagtgatgcag
ctggcggagatgggcttccctctagaagcgtgtcggaaggctgtgtactttactggaaat
atgggagccgaagtggccttcaactggatcattgttcacatggaagagccagattttgct
gaaccactgaccatgcctggttatggaggagcagcttctgctggagcctctgtttttggt
gctactggattggataaccagcctccggaggaaattgttgctatcattacctccatggga
ttccatcgaaatcaggctgttcaggcgctgcgagccacaaataataacctggaaagagca
ctggattggatctttagtcaccctgagtttgaggaggacagcgactttgtgatcgagatg
gagaataacgccaatgcaaacattatttctgaggccaagcctgaaggacctagagtcaaa
gatggatctggaatgtatgaattatttgcattcatcagtcacatgggaacatctacaatg
agtggccattatgtttgccatattaaaaaggaaggaaggtgggtgatctacaatgaccac
agagtgtgtgcctcagaaaggccccccaaggacctgggctacatgtacttttaccacagg
gtgccacgctga
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