Neogale vison (American mink): 122908727
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Entry
122908727 CDS
T08764
Symbol
SOX2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
nvs
Neogale vison (American mink)
Pathway
nvs04390
Hippo signaling pathway
nvs04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
122908727 (SOX2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
122908727 (SOX2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nvs03000
]
122908727 (SOX2)
Transcription factors [BR:
nvs03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
122908727 (SOX2)
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
122908727
NCBI-ProteinID:
XP_044107788
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Position
6:104879893..104882147
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AA seq
322 aa
AA seq
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MYNMMETELKPPGPQQTSGGGGGGGGGGNSTAAAAGGNQKNSPDRVKRPMNAFMVWSRGQ
RRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRPRRK
TKTLMKKDKYTLPGGLLAPGGNSMASGVGVGAGLGAGVNQRMDSYAHMNGWSNGSYSMMQ
DQLGYPQHPGLNAHGAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQGTPGM
ALGSMGSVVKSEASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMS
QHYQSGPVPGTAINGTLPLSHM
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggagacggagctgaagccgccgggcccgcagcaaacttcggggggc
ggcggcggcggcggcggcggcggcaactccaccgcggcggcggcgggcggcaaccagaag
aacagcccggatcgcgtcaagcggcccatgaacgccttcatggtgtggtcccgcgggcag
cggcgcaagatggcccaggagaaccccaagatgcacaactcggagatcagcaagcgcctg
ggcgccgagtggaaacttttgtcggagacggagaagcggccgttcatcgacgaggccaag
cggctgcgagcgctacacatgaaggagcacccggattataaataccggccccggcggaaa
accaagacgctcatgaagaaggataagtacacgctgcccggcgggctgctggccccgggc
ggcaacagcatggcgagcggggtcggggtgggcgccggcctcggcgcgggcgtgaaccag
cgcatggacagctacgcgcacatgaacggctggagcaacggcagctacagcatgatgcag
gaccaactgggctacccgcagcacccgggcctcaacgcacacggcgccgcgcagatgcag
cccatgcaccgctacgacgtaagcgcactgcagtacaactccatgaccagctcgcagacc
tacatgaacggctcgcccacatacagcatgtcctactcgcagcagggcaccccaggcatg
gcgcttggctccatgggctcggtggtcaagtccgaggccagctccagcccccctgtggtt
acctcttcctcccactccagggcgccctgccaggccggggacctccgggacatgatcagc
atgtacctccccggcgccgaggtgccggagcccgccgcccccagcagacttcacatgtcc
cagcactaccagagcggcccggtgcccggcacggccattaacggcacactgcccctctcg
cacatgtga
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