Neogale vison (American mink): 122908767
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Entry
122908767 CDS
T08764
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
nvs
Neogale vison (American mink)
Pathway
nvs04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
122908767 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nvs04131
]
122908767 (VPS8)
Membrane trafficking [BR:
nvs04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
122908767 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
zf-RING_Vps41
TPR_VPS8_2
Beta-prop_WDR36-Utp21_1st
TPR_Vps41
zf_RING_Vps8_fungal
WD40_CDC20-Fz
zf-RING_11
Clathrin
zf-RING_2
zf-C3H2C3
zf-RING_UBOX
zf-RING_5
Beta-prop_WDR3_1st
Beta-prop_WDR5
GED
zf-C3HC4
EIF3I
PHD
Motif
Other DBs
NCBI-GeneID:
122908767
NCBI-ProteinID:
XP_044107857
LinkDB
All DBs
Position
6:107663608..107918089
Genome browser
AA seq
1428 aa
AA seq
DB search
MENEPDHENVEQNLCAKTTEEELSKSFNLEASLSKFSYIDLDKELEFKNDLIDDKEFDIP
QVDTPPTLESILNETDDEEESFVLEDPTLLNIDTIDSHSYDTSSVASSDSGDRTNLKRKK
KLPDSFSLHGSVMRHSLLKGISAQIVSAADKVDAGLPTAIAVSSLIAVGTSHGLALIFGK
DQNQALRLCLGSTSVGGQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDA
HPPGTAILHIKFTDDPTLAICNDSGGSVFELTFKRVMGVRTCESRCLFSGSKGEVCCIEP
LHSKPELKDHPITQFSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVA
VHNYVNPMLAFCRGDVVHFLLVKRDESGAIHVTKQKHLHLYYDLINFTWINSRTVVLLDS
VEKLHVIDRQTQEELETVEISEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSISSY
GGQIFYLGTKSVYVMMLRSWRERVDHLLKQDCLTEALALAWSFHEGKAKAVVGLSGDASK
RKAVVADRMVEILFHYADRALKKCPDQGKIQVMEQHFQDMVPVIVDYCLLLERKDLLFSQ
MYDKLSENSVAKGVFLECLEPYILSDKLVGMTPQVMKDLIVHFQDKKLMENVEALIVHMD
ITSLDIQQVVLMCWENRLYDAMIYVYNRGMNEFISPMEKLFRVIAPPLNAGRTLTDEQVV
MGNKLLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSAEASPEEEIYPYVRTL
LHFDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLAR
QLAKPDNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIRMA
EKAEFYQICEFMYEREHQYDKIIDCYLRDPLREEEVFNYIHNILSIPGHSAEEKQSVWQK
AMDHIEELVSLRPCKAAELVAIHFSEQIETVIKKLQNQVLLFKFLRSLLDPREGVHVHQE
LVQMSPCVTEQFIELLCQFSPNQVIETLQVLECYRLEETIQITQKYQLHEVTAYLLEKKG
DIHGAFLIMLKRLQSKLQEITHQDEKTKEELSLKDVEDTMVETIALCQRNSHNLNQQQRE
ALWFPLLEAMMAPQKLSGSTAPHLHPEALKSLTMQVLNSMAAFIALPSILQRILQDPVYG
KGKLGEIQGLILGMLDTFNYEQTLLETTTSLLNQDLHWSLCNLRASVTRGLNPKQDYCSI
CLQQYKRRQEMADEIIVFSCGHLYHSFCLQNKECTIETEGQTRWTCYKCSSSNKVGKLSE
NSSEVKKGKTVPSQVKMSPSCHPSKGDSAVKKAASEPVLDPQQIQAFDQLCRLYRGSSRL
ALLTELSQNRSSESYRPFSGSQSGPAFNSIFQNENFQLQLIPPPVTED
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgaaccagaccatgaaaatgtggaacagaacctctgcgccaagactactgaa
gaagagctgagtaaatctttcaatcttgaagcttcgctttcaaaattctcttacatagat
ctggacaaggaactggaattcaaaaatgatttgattgatgacaaggagtttgatattcct
caagttgatactcctccgacactggaaagcatacttaatgagactgatgatgaagaggag
tcttttgttcttgaggatcctacattgttaaacattgatactattgattctcactcctat
gatacttcgtctgtggcaagttcagatagtggtgacaggaccaacttaaaaaggaagaag
aaattacctgattctttttcactccatgggtcagttatgcgacattcacttttgaaggga
atttctgcccagatagtgtctgcagctgacaaagtggatgctggcttgcctacagcaatt
gcagtatccagtctgatagctgtgggtacatctcatggattggctttaatatttggaaaa
gatcagaatcaagctttgagactttgtctgggtagtactagtgttggaggtcagtatgga
gccatctctgccctcagtatcaacaatgactgctcaagacttctctgtggctttgctaaa
ggacagatcacaatgtgggatttggccagcggaaaacttctacgatcaataacagatgct
catcctccaggaacagcaatattgcatattaagtttacagatgatccaactcttgcaatt
tgcaatgacagcggaggctctgtttttgaactgacttttaagagagtgatgggagtgaga
acatgtgagtctaggtgtctattcagtggttccaagggtgaagtttgctgtattgagcct
ctccattcgaagcctgagttgaaagatcatcccatcacacagttttccttattggccatg
gcttccttaacaaagatactggtcattggattgaaaccatctttgaaagtgtggatgact
tttccctatggacggatggatccttccagtgttccattgctggcctggcactttgtggca
gtacataattatgtgaatcccatgcttgccttctgcagaggagatgttgttcattttttg
ttggttaagagagatgagtctggagcaattcatgttactaagcaaaagcaccttcacctc
tactatgatctcatcaactttacttggataaactcacgcacagttgtgctcttggacagt
gtggagaagttgcatgtgattgatcggcagactcaagaagaactggaaacagtggagatc
tcagaagttcagttggtctataacagcagccatttcaaatccctggccactggaggaaat
gttagccaggcactggctttggttggagagaaggcttgttatcaatccatcagtagctat
ggtggtcagatcttttatttggggacaaaatctgtttatgtgatgatgctgagaagctgg
agagagagagtggatcatctcctcaaacaagattgtcttacagaagccttggctcttgca
tggtctttccatgaaggaaaagcgaaagctgtagtgggattatcaggagatgccagtaag
cgcaaggctgttgttgccgatcggatggtagaaatcctcttccactatgcagatcgagct
ctgaaaaagtgtccagaccagggaaaaatccaagtgatggagcagcatttccaggacatg
gtgcctgtcatcgttgattactgcctgttgttagagcgaaaggatcttttatttagccaa
atgtatgacaaactaagtgagaattcagtggccaaaggagtgtttttggagtgccttgag
ccatatattttaagtgataaattggtggggatgaccccacaggtaatgaaagacttgatt
gttcactttcaagataaaaagttaatggaaaatgtggaagccctcattgtacatatggat
atcaccagcctagatattcagcaggtagttctcatgtgttgggaaaatcgtctgtatgat
gctatgatctatgtctacaacagaggcatgaatgaatttattagtccaatggagaaactt
ttcagagtcattgctcctcctttgaacgcaggaaggacgctaacagatgagcaagttgtt
atgggcaacaagcttcttgtatatattagctgttgtcttgcaggccgagcctatcccctt
ggtgatatccctgaagatcttgttcccttggttaaaaaccaggtttttgaatttctgatt
cgcttgcattcagcagaagcttcccccgaggaagaaatctacccctacgttcggactctg
ctacattttgacacaagagaatttctaaatgtattggcactgacctttgaagattttaaa
aatgacaagcaagctgtagaatatcaacaaagaattgtggatattttattgaaagttatg
gtggagaattccgatttcactccctcacaagttgggtgtctcttcacattccttgcccgg
cagcttgcaaagcctgacaataccttgtttgtaaacagaaccctttttgatcaggtcctt
gaattcctctgtagtcctgatgatgactcccgacactctgaaagacagcaggtcctttta
gaattgctgcaggctggaggcatagttcagtttgaagagagtcggctcatccggatggca
gagaaagcagaattctatcaaatttgtgagtttatgtatgaacgagaacaccaatatgac
aaaataattgattgctacttacgtgatcctctaagggaggaagaagtctttaactacatt
cacaatatcttatccattcctggacacagtgcagaggagaagcagtctgtatggcagaaa
gctatggatcatatagaggaacttgtatccctgaggccttgtaaagctgcagagctggtt
gctattcacttttctgaacagattgaaacagtcattaaaaaacttcagaaccaggttttg
cttttcaaatttctgaggagtcttcttgacccaagggagggcgttcacgtacatcaggaa
ttggtgcagatgtctccatgtgtgacggagcagttcattgagctgttgtgtcagttcagc
ccaaaccaggttatagagacactgcaggtccttgagtgctaccgcctggaagaaaccatc
cagattacccagaagtatcaacttcatgaagtcactgcctacctattagaaaaaaaagga
gatattcatggtgccttcttaataatgctaaagagactgcaaagcaaacttcaagagata
acacatcaagatgaaaagaccaaagaggagctctcattgaaggatgttgaagataccatg
gtagagacaattgccctttgccagagaaattcccataatttgaaccagcagcaacgagag
gcactctggtttccattactggaggcaatgatggccccccagaagctctctggatcaacc
gcacctcatctgcacccagaagctctgaaatctctgaccatgcaagttctaaacagcatg
gcagcatttattgcccttccatcgatcttgcaaagaatcttacaggatccagtttatgga
aaaggaaaacttggagaaatccagggacttattctgggaatgttggacacctttaactat
gagcaaaccctgctggaaacaactactagccttctaaaccaagatctccattggtcgttg
tgtaacctgagagcttcagtcaccagaggactgaatcccaagcaggattactgctctata
tgtttgcagcagtacaagagacgccaagaaatggctgatgaaatcattgtctttagctgt
ggccatttgtaccactcattctgtctacaaaacaaagaatgcaccatagagaccgagggg
cagacgagatggacctgctacaaatgcagctcaagtaacaaagtagggaaattaagtgaa
aattcatctgaagttaaaaaggggaagacagtcccatcccaggtaaaaatgtctccttct
tgtcatccatccaaaggagattctgctgttaagaaggcagcctcagaacctgtcctggac
ccacagcaaatccaagcttttgatcagctttgtcgtctctaccgaggaagttccaggctg
gctctcctcacagaactctcccagaatcgcagcagtgagagctacaggccattcagtggc
tcccagagtggccctgctttcaacagcattttccagaatgagaatttccagctgcagctc
attcccccgcctgtgactgaggattga
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integrated database retrieval system
