Neogale vison (American mink): 122908860
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Entry
122908860 CDS
T08764
Symbol
ITGB5
Name
(RefSeq) integrin beta-5
KO
K06588
integrin beta 5
Organism
nvs
Neogale vison (American mink)
Pathway
nvs04145
Phagosome
nvs04148
Efferocytosis
nvs04151
PI3K-Akt signaling pathway
nvs04510
Focal adhesion
nvs04512
ECM-receptor interaction
nvs04810
Regulation of actin cytoskeleton
nvs04820
Cytoskeleton in muscle cells
nvs05165
Human papillomavirus infection
nvs05205
Proteoglycans in cancer
nvs05410
Hypertrophic cardiomyopathy
nvs05412
Arrhythmogenic right ventricular cardiomyopathy
nvs05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
122908860 (ITGB5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122908860 (ITGB5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122908860 (ITGB5)
04148 Efferocytosis
122908860 (ITGB5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
122908860 (ITGB5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
122908860 (ITGB5)
04810 Regulation of actin cytoskeleton
122908860 (ITGB5)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
122908860 (ITGB5)
09172 Infectious disease: viral
05165 Human papillomavirus infection
122908860 (ITGB5)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
122908860 (ITGB5)
05412 Arrhythmogenic right ventricular cardiomyopathy
122908860 (ITGB5)
05414 Dilated cardiomyopathy
122908860 (ITGB5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nvs04131
]
122908860 (ITGB5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nvs04515
]
122908860 (ITGB5)
Membrane trafficking [BR:
nvs04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
122908860 (ITGB5)
Cell adhesion molecules [BR:
nvs04515
]
Integrins
Integrin beta subunits
122908860 (ITGB5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
vWA_SIBA-E
EGF_Teneurin
EGF_TEN
SCO4226-like
Motif
Other DBs
NCBI-GeneID:
122908860
NCBI-ProteinID:
XP_044108087
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All DBs
Position
6:119846091..119960093
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AA seq
800 aa
AA seq
DB search
MPRAPAPLYACLLGLCALMPSLPGLNICTSGSATSCEECLLIHPKCAWCFKEDFGSLRSL
TSRCDLKANLARNGCGGEFESPASSTQVLRSLPLSSKGSSPASSDVIQMTPQKIALNLRP
GDKTTFQLQVRQVEDYPVDLYYLMDLSLSMKDDLDNIRNLGTKLAEEMRKLTSNFRLGFG
SFVDKNISPFSYTAPRYQTNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRVS
RNRDAPEGGFDAVLQAAVCKEKIGWRKDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQC
HLNEANEYTVSNQMDYPSLALLGEKLAENNINLIFAVTKSHYMLYKNFTALIPGTTVEIL
HGDSKNIIQLIINAYNSIRSKVEVSVWDQPEDLNLFFTATCQDGVSYPGQRKCEGLKIGD
TASFEVSAEARSCPGRPTEHTFTLRPVGFRDSLEVGVTYSCQCGCSARLESDSTRCSGNG
TYVCGLCECNPGHLGTRCECQDGESQTGYQNLCREAEGKPLCSGRGECSCNQCSCFESEF
GKIYGSFCQCDNFSCARNRGILCSGHGECHCGECKCHAGYIGDNCNCSTDISTCLAKDGQ
MCSDRGHCVCGQCQCTEPGAFGETCEKCPTCPDACSTKRDCIECLLLHSGVPAENQTCHS
LCKDEVVTWVDTIVKDDQEAVLCFYKTAKDCVMMFTYMELASGKSNLTVLREPECGTAPD
ATTILLAVVGSILLIGIALLAIWKLLVTIHDRREFAKFQSERSRARYEMASNPLYRKPIS
THTVDFTFNKFNKSYNGTVD
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgggcccccgcgcccctgtacgcctgcctgctcgggctctgcgcgctcatgccc
agcctcccaggtctcaacatatgcactagcggaagtgccacctcatgtgaagaatgtctg
ttaatccatccaaaatgtgcctggtgcttcaaagaggacttcggcagcctgcgctccctc
acctcccgctgtgacttgaaggcaaacctggccagaaacggctgcgggggtgagtttgag
agccccgccagcagcacccaggtcctgcggagcctgcctctcagcagcaaaggctccagt
cccgccagctcagatgtcattcagatgacaccacagaagattgccctgaacctgcggcct
ggtgacaagacgactttccagctgcaggttcgacaggtggaggattatcctgtggacctg
tactacctgatggacctctccctgtccatgaaggatgacttggacaacatccggaacctg
ggcaccaagctcgctgaggagatgaggaagctcaccagcaacttccggttggggttcggg
tcttttgtagacaagaacatctcccctttctcctacacagcgccgaggtaccagaccaat
ccatgcatcggttacaagttattcccaaactgcgtcccatcctttgggttccgccatctg
ctgcctcttacagacagagtggacagcttcaacgaggaggtccgcaaacagcgggtgtcc
cggaaccgcgatgcacccgaggggggctttgatgccgttctccaggcggctgtctgcaag
gagaagattggctggcgaaaggatgctctacatctgctggtgttcactacggacgacgtg
ccccacatcgcactggacggaaaactggggggcctggtgcagccgcatgatggccagtgc
cacctgaatgaggccaacgagtacactgtgtccaatcagatggactatccatcccttgcc
ttgcttggagagaagttggcagagaacaatatcaacctcatctttgcggtgacaaaaagc
cattatatgctctacaagaatttcacagccctgatacctggaacgacagtggagatttta
cacggagactccaaaaatatcattcaactgattatcaatgcgtacaatagcatccggtca
aaagtggaggtgtctgtctgggatcagcctgaggaccttaatctcttcttcactgctacc
tgccaggacggtgtgtcgtaccccggccagaggaagtgtgaaggcctgaagattggggac
acagcgtccttcgaggtgtcagcggaggcccgcagctgtcccggcaggcccacggagcac
acgttcaccctgcggcccgtagggttccgggacagcctggaggtgggggtcacctacagc
tgccagtgcggctgcagcgcacggctggagtccgacagcacccggtgcagtgggaacggg
acctacgtgtgcggcctgtgcgagtgcaaccccggccacctgggcacccgctgtgagtgc
caggatggggagagccagaccgggtaccagaacctgtgccgggaagccgagggcaagccc
ctgtgcagtgggcgtggggagtgcagctgcaaccagtgctcctgcttcgagagcgagttc
gggaagatctacggttctttctgccagtgtgacaacttctcctgtgccaggaacagaggg
atcctctgctcaggccatggcgagtgtcactgtggagaatgcaagtgccatgccggttac
attggggacaactgtaactgctcgacagacatcagcacatgcttggccaaagatggccag
atgtgcagcgaccgtgggcactgtgtgtgtgggcagtgccagtgcacggagccaggagcc
tttggagagacatgtgagaagtgcccgacctgcccagacgcttgcagcaccaagagagac
tgcatcgagtgcttgctgcttcactcgggggtcccggctgagaaccagacctgccacagc
ctgtgcaaggatgaggtggtcacgtgggtggacaccatcgtaaaagatgaccaagaggct
gtgctttgtttctacaaaactgccaaggactgtgtcatgatgttcacctacatggagctc
gccagcggcaagtccaacctgaccgtcctcagggagccagagtgtggaactgcccccgat
gccacaaccatcctcctggccgtggtgggcagtatcctcctgattgggattgcgctcctg
gccatctggaagctacttgtcactatccatgaccggagagagtttgcaaagttccagagc
gagcggtccagggcccgctatgagatggcttccaaccctctgtacagaaagcccatctcc
acacacactgtggatttcaccttcaacaagttcaacaaatcctacaatggcacagtggac
tga
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