Neogale vison (American mink): 122908936
Help
Entry
122908936 CDS
T08764
Symbol
NPHP3
Name
(RefSeq) nephrocystin-3 isoform X1
KO
K19360
nephrocystin-3
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
nvs03037
]
122908936 (NPHP3)
Cilium and associated proteins [BR:
nvs03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
122908936 (NPHP3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
NPHP3_hel
NPHP3
TPR_10
TPR_1
TPR_8
TPR_7
TPR_2
TPR_MalT
TPR_16
TPR_19
TPR_17
NPHP3_N
TPR_3
TPR_11
AAA_16
KAP_NTPase
NACHT
AAA_22
DUF2225
AAA_19
AAA_14
T2SSE
Viral_helicase1
TPR-S
FliD_C
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
122908936
NCBI-ProteinID:
XP_044108292
LinkDB
All DBs
Position
6:130857101..130906283
Genome browser
AA seq
1333 aa
AA seq
DB search
MGTASSLVSPAGGEVIEDTYGAGGGEACEIPVEVKPKARLLRSSFRRGAAAAAAGAGPGS
LPRGAGGGGLLGASFKSTGSSVPELEYAAAEYERLKKEYEIFRVSKNQELLSMGRREAKL
DTENKRLRAELQALQKTYQKILREKESALEAKYQAMERAATFEHDRDKVKRQFKIFRETK
ENEIQDLLRAKRELESKLQRLQAQGIQVFDPGESDSDDNCTDVTASGTQCEYWTGGALGS
EPSIGSMIQLQQSFRGPEFAHSSIDVEGPFANVNRDDWDVAVASLLQVTPLFSHSLWSNA
VRCYLIYTDETQPEMDLFLKDYSPKLKRMCETMGYFFHAIYFPIDIENQYLAVRKWEIEK
SSLVILFIHLTLPSLLLEDCEEAFLKNPEGKPRLIYHRLEDGKVSSDSVQQLIDQVSNLN
KTNKAKIIDHSGDPTEGVYKTYIYVEKIIKQDILGFEKTDPEIKDLGSEDSVPEEDDFGD
VLWDIHDEQEQMETFQQATNSVHELGFEKYYQRLNDLVAAPAPIPPLLVSGGPGSGKSLL
LSKWIQLQQKNSPNTLILSHFVGRPMSTSSESSLIIKRLTLKLMQHSWSVSALTLDPAKL
LEEFPRWLEKLSARHQGSIIIIIDSIDQVQQVEKHMKWLIDPLPVNVRVIVSVNVETCPP
AWRLWPTLHLDPLNPKDAKSLIIAECHSVDIKLNKEQEKKLERHCRSATTCNALYVTVFG
KMISCAGRAGNLDKILHQCFQCQDTISLYRLALRSIQESMANDMDKELMKQILCLINVSH
NGVSESELMELYPELSWAVLTSLIHSLHKMCLLTYGCGLLKFQHLQAWETVRLEYMDDPA
IVSSCRQKLINYFTMQLSQDRVTWRSADELPWLFQQQGSKQKLHDCLLNLFVSQNLYKRG
HFAELLSYWQFVGKDKSAMAAEYFDSLKQYEKSCEGEENMICLADLYETLGRFLKDLGLL
SQAVVPLQRSLEIRETALDPDHPRVAQSLHQLASVYVQWKKFGNAEQLYKQALEISENAY
GVEHPHIARELEALATLYQKQNKYEQAEHFRKKSFKIRQKATRRKGNLYGFALLRRRALQ
LEELTLGKDTPDNARTLNELGVLYYLQNNLETADQFLKRSLEMRERVLGPDHPDCAQSLN
NLAALCNEKKQYDKAEELYERALDIRRRALAPDHPSLAYTVKHLAILYKKMGKLDKAVPL
YELAVEIRQKSFGPKHPSVATALVNLAVLYSQMKKHIEALPLYERALKIYEDSLGRMHPR
VGETLKNLAVLSYEEGDFEKAAELYKRAMEIKEAETSLLGGKAPSRHSSSGDTFSLKTTH
SPNVFLQGQRTLK
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atggggaccgcctcgtcgctcgtgagccccgcgggcggggaggtgatcgaggacacttat
ggggcgggcggcggcgaggcctgcgagattccggtggaggtgaagcccaaggcccgcctg
ctgcgcagctcgttccgccgtggcgctgcagcggcggcggcgggggcagggcccgggtcg
ctgccccgcggggcgggtggcggcgggctgctgggggctagctttaagtctaccggctcg
tcggtgccggagctggaatacgcagcggctgaatacgagcggctgaagaaggaatacgag
atcttccgggtcagcaagaatcaagagttgttgtccatgggccgccgcgaggccaagctg
gacacggagaacaagcgcctgcgcgccgagctgcaggcccttcaaaaaacttaccaaaaa
atacttcgggaaaaggaaagtgctttagaagcaaaataccaagcgatggagagggcagcg
acatttgaacatgacagagacaaagtgaaaaggcaattcaagatttttagggagaccaag
gaaaatgaaattcaggacttactgagagctaagcgagagttggaaagcaaacttcagagg
cttcaggctcaggggatccaagtatttgatcctggagaatctgattcagatgacaactgt
acagatgttactgcttctggaacccagtgtgaatactggactggaggagccttgggaagt
gaaccttccatagggagtatgatccagcttcagcagtccttcaggggccctgagtttgcc
cacagttccatagatgtggagggaccctttgcaaatgtcaacagagatgactgggatgtc
gctgtagctagtttattacaagttactcccttgttttcacactctctctggagtaacgct
gtcagatgttacctcatttatacagatgaaacccagcctgaaatggaccttttccttaag
gactattcacctaaacttaaaagaatgtgtgagacaatgggatattttttccatgctata
tattttccaatagatattgaaaatcaataccttgctgtaagaaaatgggaaattgagaag
agttcattagttattttatttattcatttaactttaccaagccttttactggaagactgt
gaagaagcttttctgaaaaaccctgaaggcaaaccacgattaatttatcatcgcttggag
gatgggaaagtcagttccgactccgtccagcaattgattgatcaagtttctaacctgaac
aagaccaacaaagccaagatcattgatcactctggagatcctacagaaggagtatataaa
acttatatttatgtggaaaagattattaagcaggacatcttgggctttgagaaaacagac
ccggagattaaggatttgggcagtgaagattctgttccagaagaagatgattttggtgat
gttctatgggacatacatgatgaacaagagcaaatggaaactttccaacaggctacaaat
tcagtccatgagctgggattcgagaaatattaccagcgccttaacgatctagtggcggca
ccagcaccaattccaccccttcttgtatctggaggaccaggttccggaaagtcccttctc
ttatcaaagtggattcagttacaacagaagaattcccctaacacgctaattctttctcat
tttgtgggaaggcccatgtcaaccagctctgagtcctccttgattattaaacgattaact
ctaaagttgatgcaacactcttggtcggtatctgctctaacactggatccagctaagctt
ctggaagaatttccacgctggctggaaaaactctctgcccgtcatcaaggcagcatcatc
atcattattgattccatagatcaagttcagcaagttgaaaaacacatgaaatggctgatc
gacccactgccagtgaatgtaagagtaattgtttctgtgaatgtagaaacatgccctcca
gcctggaggttatggcctacacttcatcttgatcctttaaatccaaaagatgcaaaatct
cttataattgcagaatgccactctgtggacattaaattgaataaagagcaggagaagaag
ttagaacgacactgtcgttctgctacgacctgcaatgccctttatgtcaccgttttcggc
aaaatgatctcatgtgctggaagagcaggcaatttagataaaatccttcatcagtgtttc
cagtgtcaagatactatttcattatatagacttgctctgcgatctatccaggagtccatg
gcaaatgatatggataaagaactaatgaaacagattctctgcctcataaatgttagtcac
aatggcgtgagtgaatcagaactgatggaactctaccctgagctttcctgggctgtcttg
acctcccttattcacagtttacacaaaatgtgcttattgacttatggttgtggcttgctc
aagtttcaacatctacaggcttgggaaacagtaagactggaatacatggatgatccagcc
attgtttcttcatgtaggcaaaagctaatcaactatttcaccatgcagctaagtcaggac
cgagtgacttggagaagtgcagatgagctcccttggctttttcagcagcagggaagtaaa
cagaagttgcatgattgccttctcaatctctttgtgtctcaaaatctttataaaagagga
cattttgcggagttgctgagttactggcagtttgttggcaaagacaaaagcgcaatggca
gcagaatactttgattcattgaagcagtatgagaaaagctgcgaaggcgaggagaacatg
atttgcttggctgatctttatgaaaccctggggcgatttctcaaggatctaggcctcctc
agtcaggctgtggtgcctttgcagaggtctctagaaattcgagaaacagctttagatcca
gatcacccaagagtagctcagtccctccaccaactagcaagtgtgtacgtgcagtggaag
aagtttggcaatgcggaacagctgtataaacaggccttagaaatctccgaaaatgcttat
ggtgtggaacatccccatattgctcgtgaacttgaggcactggcaactttgtaccagaaa
caaaataagtatgaacaagctgaacattttaggaaaaaatcctttaaaattcgtcagaag
gctacaaggagaaaaggcaacttgtatggatttgcccttttacgtagacgagccctgcag
ttagaagagctcacgttaggaaaggacacacctgacaatgctcggaccctcaatgagctg
ggcgttctctactaccttcagaataacctggaaactgctgaccagtttctgaagcggtcc
ttagaaatgagagagcgagtcctaggaccagatcaccctgactgtgcccagtctttaaat
aatctggcagctctatgcaatgaaaagaaacagtatgataaagcagaagaactttatgaa
agagctttagacattcggagacgagcactagctcctgatcacccttctttggcctacaca
gtgaagcatcttgcaatcttgtataagaaaatggggaaacttgacaaagctgtacctttg
tatgagctggctgttgaaattcggcagaaatcctttggcccaaagcaccccagtgtagct
actgccctggtgaacttagctgttctctatagccaaatgaaaaaacacatcgaagccttg
ccactatacgaaagagcattaaagatttatgaagacagcctgggtcggatgcatcctcga
gttggagaaacattaaaaaatttagccgtgcttagctatgaagaaggggattttgaaaaa
gctgctgaactatacaaaagggcgatggaaataaaagaagcagaaacgtcacttttgggt
ggaaaagctccttcccgacactcctcaagtggagacacatttagcttaaaaacaacccat
tctcctaatgttttccttcaaggacagagaaccctaaaatga
DBGET
integrated database retrieval system
