Neogale vison (American mink): 122909098
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Entry
122909098 CDS
T08764
Symbol
TRIM71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
nvs
Neogale vison (American mink)
Pathway
nvs05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
122909098 (TRIM71)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvs03019
]
122909098 (TRIM71)
04121 Ubiquitin system [BR:
nvs04121
]
122909098 (TRIM71)
Enzymes [BR:
nvs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122909098 (TRIM71)
Messenger RNA biogenesis [BR:
nvs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122909098 (TRIM71)
Ubiquitin system [BR:
nvs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122909098 (TRIM71)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
zf-C3HC4
zf-RING_5
COG5_N
Motif
Other DBs
NCBI-GeneID:
122909098
NCBI-ProteinID:
XP_044108696
LinkDB
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Position
6:161351809..161416781
Genome browser
AA seq
869 aa
AA seq
DB search
MASFPETDFQICLLCKEMCGSPAPLSSNSSASSSSSQTSTSSGGGGGGPGAAARRLHVLP
CLHAFCRPCLEAHRLPAAGGSAPGEPLKLRCPVCDQKVVLAEAAGMDALPSSAFLLSNLL
DAVVATADEPPPKNGRAGAPAGAGGHSNHRHHAHHAHPRASASAPAPLPPAPPPPAPSRS
APGGPAASPSALLLRRPHGCSSCDEGNAASSRCLDCQEHLCDNCVRAHQRVRLTKDHYIE
RGPPGPAAAAAAQQLGLGPPFPGAPFSILSVFPERLGFCQHHDDEVLHLYCDTCSVPICR
ECTLGRHGGHSFIYLQEALQDSRALTIQLLADAQQGRQAIQLSIEQAQTVAEQVEMKAKV
VQSEVKAVTARHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQSLNKLESTISAVQ
QVLEEGRALDVLLARDRMLAQVQELKTVRSFLQPQEDDRVMFTPPDQALYLAIKSFGFVS
SGAFAPLTKATGDGLKRALQGKVASFTVIGYDHDGEPRLSGGDLMSAVVLGPDGNLFGAE
VSDQQNGTYVVSYRPQLEGEHLVSVTMCNQHIENSPFKVVVKSGRSYVGIGLPGLSFGSE
GDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGTFHHKFGTLGSRPGQFDRPAGV
ACDASRRIVVADKDNHRIQVFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSDT
RNHRIQLFGPDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDFNNHRLLVIHPDCQ
SARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGSFLCKFGAQGSGFG
QMDRPSGIAVTPDGMIVVVDFGNNRILIF
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgttccccgagaccgacttccagatctgcctgctgtgcaaggagatgtgcggc
tccccggcgccgctctcctccaactcgtctgcgtcgtcgtcgtcctcgcagacgtccacg
tcgtccggtggcggcggcgggggtccgggggccgcggcgcgccgcctacacgtcctgccc
tgcctgcacgccttctgccgcccgtgcctcgaagcgcaccggctgccggcggcgggcggc
agcgcgccgggagagccactcaagctgcgctgtcccgtgtgtgaccagaaagtagtgctg
gccgaggcggcgggcatggatgcgcttccctcgtctgccttcctgctcagcaacctgctc
gacgctgtggtggccactgccgacgagccgccgcccaagaacgggcgagccggagccccg
gcgggcgcgggcggccacagcaaccaccggcaccacgcgcaccacgcgcacccgcgcgcg
tccgcctcggccccggctccactcccgcccgcgccgccaccgcccgcgccttcccgctct
gcgcccggcggtcccgccgcctctccttccgcgctactgctgcgtcggcctcacggctgc
agctcctgcgacgagggcaacgcggcctcgtcgcgctgcctggactgccaggagcacctg
tgcgacaactgcgtccgcgcgcatcagcgcgtgcgcctcactaaggaccactacatcgag
cggggcccgccaggtccagccgccgcggccgcggcgcagcagctcgggctcggtccgccc
ttccctggcgcgcccttctccatcctgtccgtgttccccgagcgcctcggcttctgccag
caccacgacgatgaggtgctgcatctgtactgtgacacctgttcggtgcccatctgtcgt
gagtgtacgttgggccggcatgggggccacagcttcatctacctccaggaggcgctgcag
gactcgcgggcacttaccatccagctgctggccgacgcgcagcagggccgccaggcaatc
cagttgagcatcgagcaggcccagacggtggcagagcaggtggagatgaaggcaaaggtg
gtccagtcggaggtcaaagctgtgacggcaaggcacaagaaggccctggaggagcgggag
tgcgagctgctgtggaaggtggagaagatccgccaggtgaaagccaagtccctgtacctg
caggtggagaagctgcggcagagcctcaacaagctggagagcaccatcagtgccgtccag
caggtgctggaggagggccgggcgctggatgtcctgctggcccgggaccgcatgctggcc
caggtgcaggagctgaagaccgtgcgcagcttcctgcagccccaggaagacgaccgtgtc
atgttcacaccccctgaccaggccctgtacctcgccatcaagtcattcggcttcgtcagc
agtggggccttcgcaccactcaccaaagccacgggggatggcctcaagcgggccctccag
ggtaaggtggcctccttcacggttattggctacgaccatgatggggagcctcgcctctct
ggaggcgacctgatgtcagctgtggtcttgggccctgatggcaacctgtttggtgccgag
gtgagcgaccagcagaacgggacctatgtggtgagttaccggccgcagctggagggcgag
cacctggtgtcggtcaccatgtgcaaccagcacatcgagaacagccccttcaaggtggtg
gtcaagtcgggccgcagctacgtgggcattgggctcccgggcctgagctttggcagcgag
ggtgacagtgacggcaagctctgccgcccctggggcgtgagtgtggacaaggagggctac
atcatcgtggccgaccgcagcaacaaccgcatccaggtgttcaagccatgtggcaccttc
caccacaaatttggcaccctgggctcccgacctgggcagttcgaccggccagctggcgtg
gcctgcgatgcctcccgcaggatcgtggtggccgacaaggacaatcatcgcatccaggtc
ttcacgtttgagggccagttcctgctcaagttcggcgagaagggaaccaaaaacgggcag
ttcaactacccttgggacgtggcggtgaattctgagggcaagatcctggtctctgacacc
cgcaaccaccggatccagctgtttgggccagacggtgtcttcctgaataagtacggcttc
gagggggctctctggaagcactttgactccccccgtggcgtggccttcaaccacgagggc
cacttggtggtcaccgacttcaacaaccaccggctcctggtcatccaccctgattgccag
tccgcgcgtttcctgggctccgagggcacgggtaacgggcagttcctgcgcccacagggt
gtggccgtggaccaggaggggcgcatcatcgtggccgactccaggaaccaccgcgtgcag
atgttcgagtccaatggcagcttcctgtgcaagtttggcgcccagggcagtggctttggg
cagatggaccgcccgtctggcatcgctgtcacccccgacgggatgattgtggtggtggac
tttggcaacaatcggatcctcatcttctga
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