Neogale vison (American mink): 122909186
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Entry
122909186 CDS
T08764
Symbol
MBD4
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X1
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122909186 (MBD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nvs03036
]
122909186 (MBD4)
03400 DNA repair and recombination proteins [BR:
nvs03400
]
122909186 (MBD4)
Chromosome and associated proteins [BR:
nvs03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
122909186 (MBD4)
DNA repair and recombination proteins [BR:
nvs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
122909186 (MBD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
122909186
NCBI-ProteinID:
XP_044108884
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All DBs
Position
6:170067594..170076633
Genome browser
AA seq
600 aa
AA seq
DB search
MAGMESPSLGDCGAASSVTSSERLAADPHCDLRQEDGALGLENMGENEKQVMIKSSSECN
PLLQESIASAQTSDTTMTECHKSVPCGWERIVKQRLSGKTAGRYDVYFISPQGLKFRSKS
SLVKYLHKNEETSLTPEDFDFTVLSKKGIKSGYKNHNIAPLTSQMQSESNSSNRNLRTRS
WWKKDVFPLPSSCLELQSSKGLSNFKDKGVNDMDSRKVRKSKEKVPILKGIQIKRTKIRC
QKGFPDSAQSNKKRKSEYKKADDESEPVVQESPLDKTLSIDAGTSNKTLSATSEEKRLVK
EQSLSLVSNFCSEQVTSGIINKLCSTEEAEHSKKCEETFLQSEEIKSKVQVGERKEHLHT
DILKCGSEMDNNCSQTEKDSVEMCQEDTILRTQIEKRKTSLYFSSKYNREALSPPRRKAF
KKWTPPRSPFNLVQETLFHDPWKLLIATIFLNRTSGKMAIPVLWEFLEKYPSAEVARTAD
WRDVSELLKPLGLYDLRAKTIIKFSDEYLTKQWRYPIELHGIGKYGNDSYRIFCVNEWKQ
VRPTPNCNISSTFCLWGKKSPSLELKLFLGHMCYHSHSQFCSRLEGQGVTWGYRQQEEDP
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggctgggatggagagtccgagcctgggagactgcggagctgcctcgtcggtcacgtcc
agtgagcgcttagccgcagacccgcactgtgacctccgccaggaagatggtgctctggga
ttggaaaacatgggagaaaatgagaaacaagtaatgataaaaagcagcagtgagtgtaat
cccctgctgcaagaatccattgcttctgctcagactagtgatactactatgacagaatgc
cataagtctgtcccatgcggatgggaaagaattgtgaagcagaggttatcagggaaaaca
gcaggaagatatgatgtatattttatcagcccacaaggactgaagtttagatccaaaagt
tcacttgttaagtatcttcacaaaaatgaagaaacttctcttacgccagaagatttcgat
tttaccgtactttctaaaaaaggcatcaagtcagggtataagaaccacaacatagcacct
ctgacatcccaaatgcaaagtgaaagtaatagttcaaaccggaacctcaggacacgaagc
tggtggaaaaaagatgtctttcctctaccaagcagttgtctggaattgcaaagtagcaaa
ggactatctaactttaaagataagggtgttaatgacatggactccagaaaggttagaaag
tccaaagaaaaggtgcctattttgaaaggaattcaaattaagagaactaaaataaggtgc
cagaagggttttccagattctgctcaaagtaataagaaaagaaaatctgagtataaaaag
gcagatgatgaaagtgaacctgttgtgcaagaaagtccgcttgataaaacactctccatt
gatgctggaacaagcaacaagaccctcagtgcaaccagtgaagaaaagagacttgtaaaa
gaacagtcattgagtttggtatcaaatttttgttctgaacaagtaacttctggcatcata
aacaaattatgttcaactgaagaagcagaacacagcaagaagtgtgaggaaaccttttta
caatctgaggaaataaaatcaaaagtgcaagttggggaaaggaaggaacatttgcatact
gacattttaaaatgtggctctgaaatggacaacaactgctcacaaaccgagaaagactct
gtggaaatgtgtcaagaagataccattctacggacacaaatagaaaaaaggaagacaagc
ctgtatttttccagcaaatataacagagaagctcttagtccccctcgacgcaaagccttt
aagaagtggacccctccccggtcaccttttaatctcgtccaagagacacttttccacgat
ccatggaagctcctcattgctaccatatttctcaaccggacctcaggcaaaatggcaatc
cctgtgctctgggagtttctagagaagtacccttcggctgaggtagcaagaaccgcagac
tggagagatgtgtcagaacttcttaaacctcttggtctctatgatcttcgagcaaaaacc
attatcaagttctcagatgaatatctgacaaagcagtggaggtatccaattgagcttcat
gggattggcaaatatggcaatgactcttaccgaattttttgcgtcaatgaatggaagcag
gtgagacccactcccaactgtaacatctccagcacattttgtctctggggcaaaaaaagt
ccatccttagagctaaaactatttcttgggcacatgtgctatcactctcacagccagttt
tgttctaggcttgaggggcaaggggtgacatggggctataggcagcaggaagaggatcca
tag
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