KEGG   Neogale vison (American mink): 122909207
Entry
122909207         CDS       T08764                                 
Symbol
SEC13
Name
(RefSeq) protein SEC13 homolog isoform X1
  KO
K14004  protein transport protein SEC13
Organism
nvs  Neogale vison (American mink)
Pathway
nvs03013  Nucleocytoplasmic transport
nvs04141  Protein processing in endoplasmic reticulum
nvs04150  mTOR signaling pathway
nvs05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:nvs00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    122909207 (SEC13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    122909207 (SEC13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    122909207 (SEC13)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    122909207 (SEC13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nvs03019]
    122909207 (SEC13)
   04131 Membrane trafficking [BR:nvs04131]
    122909207 (SEC13)
Messenger RNA biogenesis [BR:nvs03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     122909207 (SEC13)
Membrane trafficking [BR:nvs04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    122909207 (SEC13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    122909207 (SEC13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    122909207 (SEC13)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd WD40_Gbeta Beta-prop_RIG_2nd EIF3I ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_NOL10_N Beta-prop_WDR41 Beta-prop_Vps41 Beta-prop_EML NBCH_WD40 MIOS_WD40 PAC11
Other DBs
NCBI-GeneID: 122909207
NCBI-ProteinID: XP_044108942
LinkDB
Position
6:172435072..172467784
AA seq 328 aa
MEFGDASLLPENDAAWRLDYYQHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLR
GHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTHEHTGHDSSVNSVCWAPH
DYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQ
KPNYIKKFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASC
SQDGRVFIWTCDDTSGNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVD
GQWVCISDVNKGQGSVSASVTEGQQNEQ
NT seq 987 nt   +upstreamnt  +downstreamnt
atggaatttggagatgctagcttgttgcctgaaaatgatgctgcttggaggttagattat
tatcagcacgatgcccagatggactactatggcacccgcctagcaacctgctcatcagac
aggtctgtcaaaatcttcgatgtgcgaaatggaggacagatcctcattgccgacctcagg
ggtcacgagggtcctgtgtggcaagtggcctgggcccaccccatgtatggcaacatcctg
gcatcctgctcctatgaccggaaagtcattatctggaaggaggagaatggcacctgggag
aagacacatgagcacacaggacacgactcctcagtaaactccgtgtgctgggccccccat
gactatggcctaatactggcctgcgggagctcagatggggccatctccctgctgacatac
actggagagggccagtgggaagtgaagaagatcaacaacgctcacacaattggctgcaat
gccgtcagttgggcccctgctgttgtacctggaagcctaatagaccagccatcagggcag
aagcccaactacatcaagaagtttgcatcaggcggctgtgacaacctcatcaaactgtgg
aaggaggaggaggacggccagtggaaggaggaacagaagctagaagcgcacagtgactgg
gttcgagatgtggcctgggccccctccattggcctgcccaccagcaccatcgccagttgc
tcccaggatggtcgtgtgttcatctggacttgtgatgacacctcaggcaatacatggtca
cccaaactgttgcacaagttcaatgacgtcgtgtggcatgtgagctggtccatcacagcc
aacatcctggctgtctcgggcggagacaataaggtgaccctgtggaaggagtccgttgac
gggcagtgggtgtgcatcagtgatgtcaacaagggccagggttccgtgtcggcttccgtc
acagagggccagcagaatgagcagtga

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