Neogale vison (American mink): 122909415
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Entry
122909415 CDS
T08764
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nvs04121
]
122909415
Enzymes [BR:
nvs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122909415
Ubiquitin system [BR:
nvs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122909415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-C3HC4_4
zf-ANAPC11
zf-C3HC4_3
zf-RING_11
zf-RING_Vps41
WEMBL
BRE1
Laminin_II
OVT1
zf_RING_Vps8
zf-RING-like
HIP1_clath_bdg
Sec3_CC
Crescentin
GAS
HMMR_N
zf-RING_16
Zn_ribbon_8
RINGv
RING_XB3-XBAT31
MscS_porin
zf_RING_Vps8_fungal
FANCL_C
DUF745
Motif
Other DBs
NCBI-GeneID:
122909415
NCBI-ProteinID:
XP_044109479
LinkDB
All DBs
Position
6:205269488..205291064
Genome browser
AA seq
469 aa
AA seq
DB search
MPIRALCTICSDFFDHSRDVAAIHCGHTFHLQCLIQWFETAPSRTCPQCRIQVGRRTIIN
KLFFDLAQEEESVLDAEFLKNELDNTRAQLAQKEKEKRDSQVIIDTLRDTLEERNATVES
LQKALDKAEMLCSTLKKQMKYLEQQQDESRQAQEEAHRLRTKMRTMERIELLLQSQRPEV
EEMIRDMGVGQSAVEQLAVYCVSLKKEYENLKEARKASGELADKLKKDLFSSKSKLQTVY
SELDQTKLELKSAQKDLQSADKEIVSLKKKLTMLQETLNLPPVDTETVNRLVLESPAPME
MLSLKLRRPAFGEDIDLNATFDVNTPPSQASSIHHGRAKKLCQEIARSPVQDIPKKMAKG
PKQESQLSLGGQRCVGEPDEELASAFPVFIRNAVLGQKQPKRAKAEPCRSTDAVRTGFDG
LGGRTKFIQPTDISMIRPLPVKPKPKTKQRVTARRALPPSQAKLDTFLW
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgcctatccgtgcgctgtgcaccatctgctccgacttcttcgaccactcccgagatgtg
gccgccatccactgcggccacacattccatcttcagtgcctaattcagtggtttgagaca
gcaccaagtcggacctgtccacagtgtcgaatccaggttggcagaagaaccattattaat
aagctcttctttgaccttgcccaagaggaagagagtgtcttagatgcagaattcttaaag
aatgaactggataacaccagagcccagcttgctcagaaagagaaggagaaaagggacagt
caggtgatcattgacaccctgcgggacacgctggaagagcgcaacgccaccgtggaatcc
ttgcagaaggccttagacaaggccgaaatgctgtgctccaccctcaagaagcagatgaag
tacttggagcagcagcaggacgagagcaggcaagcccaggaggaggcacaccgactcagg
accaagatgcgaaccatggagcggattgagctcctgctccagagccagcgacccgaggtg
gaggagatgatccgagacatgggtgtgggacagtccgcggtggagcagctggctgtgtac
tgcgtgtccctcaagaaagagtatgagaatctcaaagaggctcggaaggcctcaggggag
ctggcggacaaactgaagaaggacttgttttcttccaaaagcaagttgcagacagtctac
tctgaactagaccagaccaagttggagctgaagtcggcccagaaggatctacagagtgct
gacaaggagattgtgagcctgaaaaaaaagctaacgatgctgcaggaaaccctgaacctg
ccaccagtagacactgagactgtcaaccgcctggttttagagagcccagcccctatggag
atgctgagcctaaagcttcgcagaccagcctttggtgaggatattgacctcaatgccacc
tttgatgtcaacacccctccatcccaggcctccagcatccatcatggccgtgccaagaag
ctctgccaagagatagcacgctctcccgttcaggacatccccaagaagatggccaaaggc
cccaagcaggagtcccagctctcactgggcggccagcgctgtgtgggagagccagatgag
gagctggccagtgcctttcctgtctttatccggaatgccgtcctcggccagaaacagccc
aaaagagccaaggcagagccctgtcgcagcacagatgcagtaaggacaggcttcgatggg
cttggaggtcggacaaaattcatccaacctactgacatatctatgatccgcccactgcct
gtgaaacccaagcccaagactaagcagagagtgacagcgagacgagcgctccctccctcc
caggccaagctggacaccttcctgtggtag
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