Neogale vison (American mink): 122909499
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Entry
122909499 CDS
T08764
Symbol
LIMD1
Name
(RefSeq) LIM domain-containing protein 1
KO
K16682
LIM domain-containing protein
Organism
nvs
Neogale vison (American mink)
Pathway
nvs04390
Hippo signaling pathway
nvs04392
Hippo signaling pathway - multiple species
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
122909499 (LIMD1)
04392 Hippo signaling pathway - multiple species
122909499 (LIMD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvs03019
]
122909499 (LIMD1)
03036 Chromosome and associated proteins [BR:
nvs03036
]
122909499 (LIMD1)
Messenger RNA biogenesis [BR:
nvs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
122909499 (LIMD1)
Chromosome and associated proteins [BR:
nvs03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
122909499 (LIMD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
zf-ChsH2
Motif
Other DBs
NCBI-GeneID:
122909499
NCBI-ProteinID:
XP_044109676
UniProt:
A0A8C7BUJ2
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Position
6:complement(208651839..208716785)
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AA seq
671 aa
AA seq
DB search
MDKYGDLGLEASKFIEDLNMYEASKDGLFRVDKGAGNNPEFEETRRVFATKMAKIHLQQQ
QQLLQEETLPRGSRGPVNGGAPTGPQARRDAGVSSKLTVDGAAKPPLAASTVGPGTAPSV
APGQPSYPPQEQRARTYARSASHGSQDYGSKESLAGWEMSGFRPLGSCEDPSCLTHGDYY
DNLSLASPKWADEPQVSPGIRPGAGSGWPGSPGTDAPLPKPSRDHPLYQPQLSLSSSRSF
ESSQDGAGGRGDEKPAGLWTTSSSSRVSPGLSSPGPENGAMVGPPPPRTSSFLAPLAQSC
PSQGALPRTNSGVGSEVSGPLPKATVDPQVWFQDGPKSYLSSSASSSSPASVDSMPSGAA
PGLGPKPICTDPGVGPKLSPTSLVHPAMSTPPESSCKEGPPGWSSDGSLGPALPESPSPP
RVRLPCQTLVPGPELGPSAAELKLEALTQRLEREMDAHPKADYFGACVKCSKGVFGAGQA
CQAMGNLYHDACFTCAACSRKLRGKAFYFVNGKVFCEEDFLYSGFQQSADRCFLCGHLIM
DMILQALGKSYHPGCFRCVICNECLDGVPFTVDSENKIYCVRDYHKVLAPKCAACGLPIL
PPEGSDETIRVVSMDRDYHVECYHCEDCGLELNDEDGHRCYPLEDHLFCHSCHVKRLEQS
PASAALHQPRF
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggataagtatggggacctgggcctggaggccagtaaattcatcgaggacctgaatatg
tacgaggcctccaaggatggactcttccgagtggacaagggggcaggcaacaaccctgag
tttgaggaaacgcgccgggtgtttgccaccaaaatggccaagatccacctccagcagcag
caacagctcttgcaggaggagaccctgcccagggggagcaggggcccagtcaatggtggg
gcccccacgggcccacaggcccgccgggacgctggtgtgagcagcaagctgaccgtggat
ggtgctgccaagccccctctcgctgcctccacggtgggtcctgggacagccccctctgtc
gcccccgggcagccctcatacccaccccaggagcagagggccaggacatatgcccgcagc
gcaagtcacggcagccaggactatggctccaaggagagcctggcaggctgggagatgtct
ggcttccgcccactgggctcctgtgaggacccttcctgcctcacccacggagactattat
gacaacctctccttggcaagcccaaagtgggctgatgaaccccaagtgtcccccggcatt
aggccgggcgcagggagtgggtggcctggctccccagggacggatgcaccactgcccaaa
ccctccagggaccatcccctgtaccagcctcagctgtccctgagctccagcaggtcattt
gagagcagccaggatggcgctggtggccgcggtgacgagaagccggctgggctttggact
acctcctcctcctcgcgggtgagccctggcctttcttccccaggcccagagaatggggcc
atggtagggccccctccgcccaggacctcctctttcttagcccccttggcccagagctgc
cccagccaaggagctcttccaagaacaaactcgggggtgggcagtgaggtttcaggcccg
ctgcccaaagccacggtggaccctcaagtctggttccaagacggacccaaatcttacctt
tctagttcggcctcatcatcctcaccagccagcgtggacagtatgccgtcgggtgcggcc
cctgggctgggtcccaagccaatctgcacagaccctggcgttggtcccaagctcagcccc
accagccttgtccacccagcgatgtccaccccgcccgagtcatcttgtaaagaaggtccc
cctggctggtcgtcagatggcagcctggggcctgcgctcccggagagccccagccccccc
agggtgaggctgccctgccagaccctcgtcccaggccccgagctcgggccctccgctgcc
gagttgaaattagaagccctaacccaacgtctggagcgagaaatggacgcacacccgaag
gccgattactttggagcctgcgtgaagtgcagcaaaggtgtgttcggagccggccaggcc
tgccaggccatggggaacctctaccacgacgcgtgtttcacctgcgcagcctgcagccgg
aagctgagaggaaaagccttttattttgtcaacggcaaggtgttttgtgaggaagacttc
ctgtactctgggttccagcagtctgctgacaggtgttttctttgtgggcatctcatcatg
gacatgatcctgcaggccctcgggaagtcctaccaccccggctgcttccgctgcgtcatc
tgtaacgagtgtttggacggggtgcccttcaccgtggactctgagaacaagatctactgt
gtccgagattaccacaaagtgctggcccccaagtgtgcagcgtgcgggcttcccatcctt
ccaccggagggctcagatgagaccatccgcgtcgtgtccatggacagagactaccatgtg
gagtgctaccactgcgaggactgcggtctggagctcaatgacgaagacggtcaccgctgc
tacccgctggaggaccacctgttctgtcactcctgccacgtcaagaggctggagcagagc
cccgcgtctgcggctcttcaccagccgcgcttctag
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