Neogale vison (American mink): 122909585
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Entry
122909585 CDS
T08764
Symbol
LSM4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4 isoform X1
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03018
RNA degradation
nvs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122909585 (LSM4)
09123 Folding, sorting and degradation
03018 RNA degradation
122909585 (LSM4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvs03019
]
122909585 (LSM4)
03041 Spliceosome [BR:
nvs03041
]
122909585 (LSM4)
Messenger RNA biogenesis [BR:
nvs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122909585 (LSM4)
mRNA degradation factors
5'-3' decay
Lsm complex
122909585 (LSM4)
Spliceosome [BR:
nvs03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
122909585 (LSM4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
122909585
NCBI-ProteinID:
XP_044109836
UniProt:
U6CQD8
LinkDB
All DBs
Position
6:212672214..212684815
Genome browser
AA seq
139 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVAKGRGRGGLQQQKQQKGRGMGGAGRGVFGGRGRGGI
PGTGRGQPEKKPGRQAGKQ
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgcttcccttgtcgctgctgaagacggctcagaatcatcccatgttggtggaactaaaa
aatggggagacatacaatgggcacctggtgagctgtgataactggatgaacattaacctt
cgagaggtgatctgcacatccagggacggggacaagttttggcggatgccagagtgctat
atccgcggcagcaccatcaagtacctgcgcatccccgacgagatcattgacatggtcaag
gaggaggtggtggccaagggccgtggccgcggtggcctgcagcagcagaagcagcagaag
ggccgaggcatggggggcgctgggcgaggtgtgtttggcggccggggccgcggtgggata
ccaggcacaggcagaggtcagccggaaaagaagccgggcagacaggcgggcaaacagtga
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