Neogale vison (American mink): 122909607
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Entry
122909607 CDS
T08764
Symbol
COLGALT1
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
nvs
Neogale vison (American mink)
Pathway
nvs00310
Lysine degradation
nvs00514
Other types of O-glycan biosynthesis
nvs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
122909607 (COLGALT1)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
122909607 (COLGALT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
nvs01003
]
122909607 (COLGALT1)
Enzymes [BR:
nvs01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
122909607 (COLGALT1)
Glycosyltransferases [BR:
nvs01003
]
O-Glycan biosynthesis
O-linked Gal type
122909607 (COLGALT1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
122909607
NCBI-ProteinID:
XP_044109889
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All DBs
Position
6:complement(213204999..213225146)
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AA seq
623 aa
AA seq
DB search
MAAAPRVCRRRWRLRPVLLLLLLLALPPPGGPPGAAAYFPEERWSPESPLQAPRVLIALV
ARNAAHALPATLGALERLRHPRERTALWVATDHNSDNTSAVLREWLVAVKSLYHSVEWRP
AEEPRSYPDEEGPKHWSDLRYEHVMKLRQAALKSARDMWADYILFVDADNLILNPNTLSL
LIAENKTVVAPMLDSRAAYSNFWCGMTSQGYYKRTPAYIPIRKRDRRGCFAVPMVHSTFL
IDLRKAASRNLAFYPPHPDYTWSFDDIIVFAFSCKQAEVQMYVCNKEVYGFLPVPLRSHS
TLQDEAESFMHVQLEVMVKHPPAEPSRFISVPPKTPDKMGFDEVFMINLKRRQDRRERML
RALQAQEIECRLVEAVDGKAMNTSQVEALGIQMLPGYRDPYHGRPLTKGELGCFLSHYNI
WKEVVDRGLRKSLVFEDDLRFEIFFKRRLLNLMRDVEREGLDWDLIYVGRKRMQVEHPEK
AVPRVRNLVEADYSYWTLAYVISLQGARKLLAAQPLSKMLPVDEFLPVMFDKHPVSEYKA
HFSPRNLRAFSVEPLLVYPTHYTGDDGYVSDTETSVVWNNEHVKTDWDRAKSQKMREQQA
LSREAKNSDVLQSPLDSAARDEL
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccccacgcgtgtgcaggcggcgctggcggctgcgcccggtgctgctgctg
ctgctactgctggcgctgccgcccccgggcggcccgccgggcgccgccgcctacttcccg
gaggaacgctggagccccgagtcgccgctgcaggcgccccgagtcctcatcgcgctggtg
gcgcgcaacgcggcccacgcgctgcccgccacgctgggcgcgctcgagcggctgcggcac
ccgcgggagcgcacggcgctgtgggtggccacagatcacaactcagataacacatcggct
gtgctgcgggaatggctggtggccgtgaagagtctgtaccactctgtggagtggcgacca
gcggaggaacccaggtcctacccggatgaggagggccccaaacactggtctgacttgcgc
tatgagcacgttatgaagttgcgccaggcagccttgaaatctgcccgggacatgtgggct
gattacatcctgtttgtggacgcagacaacctgatcctcaatccgaacacactaagcctc
ctcattgctgagaataagacggtggtggcccccatgctggattcgcgggctgcatactcc
aacttctggtgcgggatgacctcccagggctactacaaacgtacccccgcctacatcccc
attcgcaagcgggaccgccggggctgctttgctgttcccatggtgcactccaccttcctc
attgacctgcggaaggcagcgtccaggaacttggcgttctaccctcctcaccctgactac
acctggtcctttgacgacatcatcgtttttgccttctcctgcaagcaagcagaggtccag
atgtacgtctgcaacaaggaggtgtacggcttcctgcctgtgccgctgcggtcacacagc
accctccaggatgaggccgagagcttcatgcacgtgcagctggaggtcatggtaaagcac
ccaccggcggagccctccaggttcatctccgtgccccccaagacgcctgacaagatgggc
ttcgacgaggtcttcatgatcaacctgaagcggcggcaggaccggcgggagcgcatgctg
cgggccctgcaggcacaggagatcgagtgccgcctggtggaggctgtggacggcaaggcc
atgaacaccagccaggtggaggcgctgggcatccagatgctgcccggctaccgggacccc
taccacgggcggccccttaccaagggcgagctgggctgcttcctcagccactacaacatc
tggaaggaggttgtggaccgcgggctgcggaagtcacttgtcttcgaggacgacctgcgc
tttgagatcttcttcaagagacgcctgctcaacctcatgcgggatgtggaacgggagggt
ctggactgggacctcatttacgtgggccggaagcggatgcaggtggagcacccggagaag
gccgtgccccgcgtgaggaacctggtggaggcagattactcctactggacgctggcctac
gtgatctccctgcagggcgcccgcaagctgctggccgcccagccgctctccaagatgctg
cctgtcgacgagttcctgccggtcatgtttgacaagcacccagtgtccgagtacaaggcc
cacttctcgccccgcaacctgcgcgccttctcggtggagcccctgctcgtctaccccacg
cactacacgggggacgatggctatgtgagcgacacggagacctcggtggtgtggaacaac
gagcacgtgaagaccgactgggaccgcgccaagtcccagaagatgcgggagcagcaggcg
ctgagccgcgaggccaagaactccgacgtgctgcagtcgccgctggacagcgcggcccgc
gacgagctctga
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