Neogale vison (American mink): 122910933
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Entry
122910933 CDS
T08764
Symbol
RXRB
Name
(RefSeq) retinoic acid receptor RXR-beta isoform X1
KO
K08525
retinoid X receptor beta
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03320
PPAR signaling pathway
nvs04659
Th17 cell differentiation
nvs04919
Thyroid hormone signaling pathway
nvs04920
Adipocytokine signaling pathway
nvs04928
Parathyroid hormone synthesis, secretion and action
nvs05200
Pathways in cancer
nvs05202
Transcriptional misregulation in cancer
nvs05207
Chemical carcinogenesis - receptor activation
nvs05216
Thyroid cancer
nvs05222
Small cell lung cancer
nvs05223
Non-small cell lung cancer
nvs05226
Gastric cancer
nvs05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
122910933 (RXRB)
09152 Endocrine system
04920 Adipocytokine signaling pathway
122910933 (RXRB)
03320 PPAR signaling pathway
122910933 (RXRB)
04919 Thyroid hormone signaling pathway
122910933 (RXRB)
04928 Parathyroid hormone synthesis, secretion and action
122910933 (RXRB)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
122910933 (RXRB)
05202 Transcriptional misregulation in cancer
122910933 (RXRB)
05207 Chemical carcinogenesis - receptor activation
122910933 (RXRB)
09162 Cancer: specific types
05226 Gastric cancer
122910933 (RXRB)
05216 Thyroid cancer
122910933 (RXRB)
05222 Small cell lung cancer
122910933 (RXRB)
05223 Non-small cell lung cancer
122910933 (RXRB)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
122910933 (RXRB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nvs03000
]
122910933 (RXRB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
nvs03310
]
122910933 (RXRB)
Transcription factors [BR:
nvs03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
122910933 (RXRB)
Nuclear receptors [BR:
nvs03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
122910933 (RXRB)
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
122910933
NCBI-ProteinID:
XP_044111416
LinkDB
All DBs
Position
1:119305278..119311851
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AA seq
533 aa
AA seq
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MSWAARPPFVPERHAAGQCGPVGVRKEMHCGVASRWRRRRPWLDPAAAAAAAAAAGEQQT
PEPEPGEAGRDGMGDSGRDSRSPDSSSPNPLPQGAPPSSPPGLPLPPSAASSLGGSGAPP
PPPMPPPPLGSPFPVISSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGSGPPEDVK
PPVLGVRGLHCPPPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYS
CRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDGEGAGGAPEEMP
VDRILEAELAVEQKSDQGVEGPGGTGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIPHF
SSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRV
LTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYP
EQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLA
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggctgctcgcccgcccttcgtccccgagcggcatgccgcagggcagtgtggg
ccggtgggggtgcgaaaagaaatgcattgtggggtcgcctcccggtggcggcggcgacgg
ccctggctggatcccgcagcggcggcggcggcggcggcagcagccggagaacaacaaacc
ccggagccggagccgggggaggctggacgggacgggatgggcgacagcgggcgggactcc
cgaagcccagacagttcctccccaaatccccttccccagggggcccctccctcttctcct
cccgggctacccctacccccttcagcagcctcctcccttggaggctctggggccccaccc
ccgcccccgatgccacctcccccactgggctcccctttccctgtcatcagctcttccatg
gggtcccctggtctgccccctccagctcccccaggattctccgggcctgtcagcagtccc
cagattaactcaacagtgtcgctccctgggggtgggtctggcccacctgaagatgtgaag
ccaccagtcttaggggttcggggcctgcactgtccaccccctccaggtggccctggggct
ggcaaacggctatgtgcaatctgcggggaccgaagctcaggcaaacactatggggtttac
agctgtgagggctgcaaaggcttcttcaagcgcaccatccgtaaggacctgacctactca
tgccgggacaacaaggactgcaccgtggacaagcgccagcgaaaccgctgtcagtactgc
cgctatcagaagtgcctggccaccggcatgaagagagaggcggtacaggaggagcgtcag
cgggggaaggacaaggacggggatggggagggggctgggggagcccccgaggagatgcct
gtggacaggatcctggaggcagagcttgctgtggagcagaagagtgaccagggcgttgag
ggtcctgggggaaccgggggtagcggcagcagcccaaatgaccctgtgactaacatctgt
caggcagctgacaaacagctattcacgcttgttgagtgggcgaagaggatcccacacttt
tcctccttgcctctggatgaccaggtcatattgctccgggcaggctggaatgagctcctc
attgcttccttctcccaccgatccattgatgtccgagatggcatcctcctcgccacaggt
cttcatgtgcaccgcaactctgcccattctgcaggcgtgggagccatcttcgatcgggtg
ctgacagagctagtgtccaaaatgcgtgacatgaggatggacaagacagagcttggctgc
ctgagggcaatcattctgttcaatccagatgccaagggcctctccaatcctagcgaggtg
gaggttctgcgggagaaagtgtacgcatcactggagacctattgcaagcagaagtaccct
gagcagcagggacggtttgccaagctgctgctacgtcttcctgccctcaggtccatcggc
cttaagtgtctagagcatctgtttttcttcaagctcattggagacacccccattgacacc
ttcctcatggagatgcttgaggctccccaccagctggcctga
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