Neogale vison (American mink): 122911179
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Entry
122911179 CDS
T08764
Symbol
TAF1C
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nvs03021
]
122911179 (TAF1C)
Transcription machinery [BR:
nvs03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
122911179 (TAF1C)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TAF1C_HB
TAF1C_beta-prop
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
122911179
NCBI-ProteinID:
XP_044111571
UniProt:
A0A8C7BU38
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Position
7:4276862..4286645
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AA seq
864 aa
AA seq
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MDFPSSLRPTLFMAGPLGLSNVPDLSFMCSWRDALMLPESLPENSENGGPHMATQLLWEP
ETPGPLPLLPPGPDPWDPGVTAQDLLFRGGFTFRRKPRAVLDVTEQLSRFLWDHGDIAFA
PLGKLMLENFKLEGARSRSKKKTVVSVKSLLQDLGGHQPWGCPWAFLSYRQRRFSILGGP
VLGKSVASLLGELLHEELAVRWEQLLLDDAFTGGALAWVPGRTPQVGQLVYPAGGALDKL
CFQEVSLTSSGAAQALRDPGHIQLRGPVRQVVTRTVQGETLLAVRSDYHCALWKVSKQGQ
PAPLPVLQVRKGATGISLSPHLPGELAVCSRSGAVCLWTPQDGLQQVYKDPETLVFCDHS
SWRWADFTAHPRVLTVGDRTGVKIVDTQGPPGCGLLLFRGGAEASCQKGERVLLTQYLGA
CSPEPLHPTLHLICTQFSLYLVDERLPLVPMLKWNHELPSAPLWAQLLPPPRPGCPRPLL
LGAQRGHLRLLHLTGEGASAPRLAGHPQSLPSSSDSLSAFPLLEPKSQWRLQERLKAPTI
GLAATIPFPASEPVLSLFQLSAAGDIFHQRLRLQADPGATLHAPTASWTPQATAFCSRWL
KALLKVPPPPPVWAAPTFSHRRLLGCMEQRTGEHKGPEGLRAAMAGGRLLQQRDLGPLPS
AEPPPAPEPGPEDELSARLEAAWEGQMAAWWERQQGRSSGPSRPSKRHKRRTQLSSTFSS
LSGRLDLSDAISPPHSPDRASPEAKSQPPVTPPSHESTQELWAQGVPSERQQTLRDYMAK
LPLGGDSPRGVCSSLSQSPSLQATSSRSQTLQERTAELPPRRTTLRGAAVSSSQTSSLRA
TPSRQRASVPSGSQPQRKKPRMGF
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggacttccccagctcccttcgacccacactgttcatggctggcccccttggtctgagt
aatgtccctgacttgtccttcatgtgtagctggagagacgccctgatgctgccggagtcc
ctgcccgagaactctgagaatggggggccgcatatggccacgcagctgctctgggagcca
gagacccccgggccccttcctctgctgcctcctggtcctgatccctgggaccctggggtg
actgcccaggacctgcttttccggggaggtttcacattccgaaggaagccccgagccgtg
ctggatgttacggaacagctcagccgctttctgtgggaccatggggacatagcctttgca
cccctggggaagctgatgctggagaatttcaaactggagggagcacggagccgttctaag
aagaagacagtggtcagtgtgaagagcctactccaggacctcggtggacatcagccctgg
ggctgcccctgggctttcctcagctaccgacagcgccgcttctccatcctcgggggcccc
gtcctgggcaagtcagtggccagcctcctgggggagctgctgcacgaggagctggccgtg
cggtgggagcagctgctcctggacgacgcgttcaccgggggcgctttggcctgggtgccc
gggaggacgccccaggtgggacagttggtctaccctgcaggaggtgctctggacaagctc
tgtttccaagaggtcagtctgacctcaagcggtgctgctcaggctctcagggaccctggc
cacatccagctccgaggacctgtccggcaggtggtgacccgcaccgtgcaaggagaaacc
ctgctggctgtccgctctgactaccactgcgccctgtggaaggtcagtaagcaggggcag
cctgcccctctcccagtgctgcaggtcaggaagggggccactgggatcagcctcagcccg
catctgcccggggagctggcggtctgcagccgttccggagccgtctgtctgtggaccccc
caggacgggctgcagcaagtctacaaggaccctgagacccttgtgttctgtgaccattct
tcctggcgctgggcagacttcaccgctcatccccgggtgctgactgtgggggaccgcaca
ggagtgaaaattgttgacactcagggcccacccggctgtggtctgctgctttttcgtggg
ggcgcagaggcatcgtgccagaaaggagaacgtgtcctgctgacccagtacctgggggcg
tgcagccccgagcccctgcatcccacgctccatctcatctgcacgcagttttctctctac
ctggtggatgagcgcctccccttggtgcccatgctgaagtggaaccatgagctcccctcg
gctcccctgtgggcccagctgctgcccccgccacggcccggctgcccacggccgctgctc
ctgggcgcccagcgcgggcacctgcggctgctacaccttacaggagagggggcctctgca
cccaggctggcggggcacccccagtctctcccttccagcagcgactccctctccgcgttt
cccctgctggagcccaagagtcagtggcggctgcaggagcgtctgaaagcaccaaccata
ggtctggctgccaccatccctttcccggcgtccgagccagtcctgtcgctcttccagctc
tcagcagccggggatatcttccaccagcgcctccgcctccaggcagaccctggggctacc
ctccatgcccccacggcttcctggactccgcaggccactgcgttctgcagccgatggctg
aaggccctgctgaaggtgcccccgcctccccctgtgtgggcggcacccaccttttcccac
cgccgcctgctgggctgcatggagcagaggacgggggagcacaaggggccagagggtctc
cgagcagccatggctggagggcggctgctgcagcagagggacctgggcccactcccctct
gcggagccaccccctgcccccgagccgggccctgaggatgagctcagtgcacgtttggag
gcggcttgggaaggccagatggccgcctggtgggagaggcagcagggccggagctccggg
cccagcagaccgtccaagcggcacaagcgccggactcaactgtccagcactttctcctca
ctcagcggccgcctggacctctcggatgccatcagcccccctcatagcccagaccgggca
tcccccgaagccaagtctcaaccaccagtgaccccgccctcccatgagtccactcaggag
ctatgggctcagggtgtcccctcggagcggcagcagactctccgtgactacatggccaag
ctgccgctcggaggggacagcccacgtggtgtctgctcgtccctctcccagagccccagc
ctccaggccacgtcctccaggtcccagaccctccaggaacgcacagccgagctgccgcca
cgaaggaccaccctgagaggtgccgccgtgtcttcctcccagacctccagcctccgggcc
accccctccaggcagcgggcatctgtcccctctggctctcagccccagcggaagaagccg
cgcatgggcttctga
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