Neogale vison (American mink): 122911257
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Entry
122911257 CDS
T08764
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122911257 (SF3B3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nvs03021
]
122911257 (SF3B3)
03041 Spliceosome [BR:
nvs03041
]
122911257 (SF3B3)
03036 Chromosome and associated proteins [BR:
nvs03036
]
122911257 (SF3B3)
Transcription machinery [BR:
nvs03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
122911257 (SF3B3)
Spliceosome [BR:
nvs03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
122911257 (SF3B3)
Complex B
122911257 (SF3B3)
Complex C
U2 SnRNP specific factors
122911257 (SF3B3)
Chromosome and associated proteins [BR:
nvs03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
122911257 (SF3B3)
TFTC complex
122911257 (SF3B3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
122911257
NCBI-ProteinID:
XP_044111693
LinkDB
All DBs
Position
7:12643879..12686796
Genome browser
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG
DDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgttcctatacaacttgaccttgcagcgggccacaggcatcagctttgccattcatggc
aacttctctggaaccaaacagcaggaaattgttgtttcccgtgggaagatactggagctg
cttcgccctgaccccaacactggcaaagtacacactctactaactgtggaagtatttggt
gttatccggtcactcatggcctttaggctgactggtggcaccaaagactacatcgtggtt
ggcagtgactcgggtcggattgttatcttggaataccagccatctaagaatatgtttgag
aaaattcaccaagaaacctttggcaagagcggatgccgccgcattgttcctggccagttc
ttagctgtggatcccaaagggcgagctgttatgattagtgccattgaaaaacagaaattg
gtatatatcttaaacagagatgctgcagcccggcttaccatttcatctcccctagaggcc
cacaaagcgaacactctagtatatcatgtggttggagtagatgtaggatttgaaaatcca
atgtttgcttgtctggaaatggattatgaggaagcagacaatgatccaacaggggaagca
gcggctaatactcagcagactcttaccttctatgaattagaccttggtttaaatcatgtg
gtccgaaaatacagtgaacctttggaggaacatggcaactttcttattacagttcccgga
gggtcagatggtccaagtggagtgttaatctgctctgaaaactatatcacctacaagaac
ttcggtgaccaaccagatatccgctgtccaattcccagaagacggaatgacctggatgat
cctgaaagaggaatgatttttgtctgctctgctacccataagaccaaatcgatgttcttc
tttttggcacaaactgagcagggagatatcttcaagatcactttggagacagatgaagat
atggttactgagatccggctcaagtattttgatactgtgcctgttgctgctgccatgtgt
gtgcttaaaacaggcttcctttttgtagcatcagaatttggaaaccattacttatatcaa
attgcacatctcggagacgatgatgaagaacctgagttttcatctgccatgcctctggaa
gaaggagacacattcttcttccaaccaagaccactcaaaaaccttgtgctggttgatgaa
ttggacagcctatctcccattttgttttgccagatagctgatctggccaatgaagacaca
ccacagctctatgtggcctgtggtaggggaccgcgatcatctctgagagtcctaaggcat
ggacttgaggtatcagaaatggctgtctctgagttacccggtaaccccaatgctgtctgg
acagtgcgtcggcacattgaagatgagtttgatgcctacatcattgtgtctttcgtgaat
gccacactggtgttatccatcggagagactgtggaagaagtgactgactctgggtttctg
ggcaccaccccaaccttgtcctgctcgttgttaggagatgacgccttggtgcaggtgtat
cctgatggtattcggcacataagagcagacaaacgagtcaatgaatggaagacccctgga
aagaaaacgattgtaaaatgtgcagtgaaccagcgacaggtggtgatcgccctgacagga
ggagagctggtctattttgagatggatccttcaggacagctgaacgagtacacagagcgg
aaggagatgtcggcagatgtggtgtgcatgagtctggccaacgtgcctcctggagagcag
cggtctcgcttcctggctgtggggctggtggacaatactgttagaatcatctctctggat
ccatcagactgtttgcagcctctgagcatgcaggcgctcccagctcagcccgaatccttg
tgtattgtggagatgggtggtactgagaaacaagatgagctgggggaaaggggctctatt
ggcttcctatacctgaatattgggttacagaatggtgtgctgctgagaaccgtcctggac
cctgtgactggggatctgtctgacacacgtactaggtacctggggtcccgtcctgtgaaa
ctctttcgtgtccggatgcaaggccaggaagcagtgttggccatgtcaagccgatcgtgg
ttgagctattcctaccagtctcgtttccatctcacccccttgtcttatgagaccctggag
tttgcatctggctttgcttctgaacagtgtcctgagggtattgtcgccatctccaccaat
actctgaggattttagcattggagaagctaggtgctgtcttcaatcaagtggcctttcca
ctgcagtacacacccaggaaatttgttattcaccctgagagtaacaaccttatcatcatt
gagacggaccacaatgcctacactgaggcaacaaaagctcagaggaagcagcaaatggcc
gaggaaatggtagaagcagcaggggaggatgagcgggagcttgctgcagagatggcagca
gcattcctcaatgaaaaccttcctgagtccatttttggagctcctaaagctggcaatggg
cagtgggcctctgtgatccgagtgatgaatcctattcaagggaacacgctggatcttgtc
cagctagaacagaatgaggccgcttttagtgtggctgtgtgcaggttttccaacactggt
gatgattggtatgtgttggtgggcgtggccaaagacctgattctcaatcccaggtctgta
gccgggggctttgtctatacctacaagctcgtgaataatggggagaaactggagtttttg
cacaagactccagtggaagaggtccctgctgccattgctccattccaggggagggtgttg
attggtgtggggaagcttctgcgagtttatgacctggggaagaagaagttactccgaaag
tgtgagaacaagcatattgccaattacatctctgggatccagactattggacacagggta
attgtgtctgatgtccaagaaagtttcatctgggttcgatacaagcgtaatgagaaccag
cttatcattttcgccgatgatacttacccacgatgggtcactacagctagcctcctggac
tatgacactgtggcgggggcagacaaatttggcaacatttgtgtggtgaggctcccacct
aacaccaatgacgaagtggatgaggatcccacaggaaacaaagccctgtgggaccggggc
ttgctcaacggggcctctcagaaggcggaggttatcatgaactaccatgtgggcgagacc
gtgctgtctttacagaagaccacactgatccctggaggctcagaatcgcttgtctatacc
accttgtcaggaggaattggcatccttgtcccattcacatcccatgaggaccatgacttt
ttccaacacgtagaaatgcatctacggtctgagcatcctcctctctgtggacgagaccac
ctcagttttcgttcctattacttccctgttaagaatgtgatagatggagatctctgtgag
cagttcaactccatggagcccaacaaacagaagaacgtctctgaagaactggaccgaacc
ccacctgaggtgtccaagaagcttgaggacatccggacccgctatgccttctga
DBGET
integrated database retrieval system
