Neogale vison (American mink): 122911300
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Entry
122911300 CDS
T08764
Symbol
UTP4
Name
(RefSeq) U3 small nucleolar RNA-associated protein 4 homolog isoform X1
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122911300 (UTP4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nvs03009
]
122911300 (UTP4)
Ribosome biogenesis [BR:
nvs03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
122911300 (UTP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
WD40_Prp19
WDR55
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_NUP159_NUP214
EIF3I
Beta-prop_Vps41
Beta-prop_TEP1_2nd
PEP5_VPS11_N
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_BBS7
Beta-prop_SPT8
Ge1_WD40
Beta-prop_RSE1_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
PQQ_2
Beta-prop_RIG_1st
Beta-prop_TEP1_C
Motif
Other DBs
NCBI-GeneID:
122911300
NCBI-ProteinID:
XP_044111775
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Position
7:complement(16672492..16709182)
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AA seq
686 aa
AA seq
DB search
MGEFKVHRVRFFNYIPSGIRCVAYNNQSNRLAVSRTDGTVEIYNLSANYFQEKFFPGHES
RATEALCWAKGQRLFSAGLNGEIIEYDLQALNIKYAMDAFGGPIWSMAVSPHGSQLLVGC
EDGSVKLFQITPDKIQFERNFDRQKSRILSLGWHPSGTHVAAGSIDYISVFDVKSGSTVH
KMLVDRQYMGVSKRKCIIWGVAFLSDGTVISVDSAGKVQFWDSATGTLVKNHLIANADVQ
SIAVSDQEDSFVVGTAEGTVFHFQLVSVTSNSSEKQWVRTKPFQHHTHDVRAVAHSPTAL
ISGGTDTHLVIRPLMEKVEVKNYDAALRKITFPHRRLISCSKKRQLLLFQFTHHLELWRL
GSTVATGKNGDTLPLSRDADHLLHLKTKGPENIICSCISPCGSWIAYSTTSRFFLYRLNY
EHDNISLQRVSKMPAFLRSALQILFSEDSTKLFVASNQGSLHVIRLLEGSFKHLHTFQPQ
SGTVESMCLLAVSPDGNWLASSGTSAGVHVYNIKHLKLHCTVPSYNFPVTALAIAPNTNN
LVIAHSDQQVFEYSIPDKQYTEWSRTIQKQGFHYLWLQRDTPITHISFHPKRPMHILLHD
AYMFCIIDKSLPLPNDKTLLYNPLPPTKESDVIRRRTAHAFKISKIYKPLLFMDLLDERT
LVAVERPLDDIIAQLPPPIKKKKFGT
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaatttaaggtccatcgagtacgtttctttaattatattccatcagggatccgc
tgcgtggcttacaataaccagtcaaacagattggctgtttctcgaacagatggcactgtg
gaaatttataacttgtcagcaaactactttcaggagaaattttttccaggtcatgagtct
cgggctacagaagctctgtgttgggcaaaaggacagcgactctttagtgctggactcaat
ggagaaattatcgagtatgatttgcaggcattaaacatcaagtatgccatggatgccttt
ggaggacccatttggagcatggctgtcagtccccatggttctcagcttttggttggctgt
gaagatggatctgtgaagctctttcaaatcactccagacaaaatccagtttgaaagaaat
tttgatcggcagaaaagtcgcatcctgagtctcggctggcatccctctggtacccacgtt
gcagctggctccatagactacattagtgtgtttgatgtcaaatcagggagcactgttcat
aagatgctggtggataggcagtatatgggtgtgtctaagcggaagtgtatcatatggggc
gtggccttcttgtctgatggaactgtcataagtgtggactctgctgggaaggtgcagttc
tgggactcagctactgggacgcttgtgaagaaccatctcattgcaaatgctgatgtgcag
tccattgcggtatctgatcaagaagacagtttcgtggtgggcacagccgaggggacagta
ttccattttcagctggtctctgtgacttccaacagcagtgagaagcagtgggtgcggaca
aagccattccagcatcatacacatgacgttcgagccgtggcccacagcccgacagcattg
atatctggaggcactgacacccatttagtcattcgtcctctcatggaaaaagtggaggtt
aagaattatgatgctgctctccgaaaaatcacttttccccatcgacgcctcatttcctgt
tcaaagaagagacagcttctccttttccagttcactcatcacttggaactttggcgactg
ggatctacagttgcaacaggaaagaatggggatacccttccactttctagagatgcagat
catttgctgcacctcaagacaaagggtcccgagaacattatttgcagctgtatctctcct
tgtggaagttggatagcctattctacaacttctcggttttttctttatcggttgaattat
gaacatgacaacataagcctccaaagggtttccaaaatgccagcgttccttcgctctgcc
cttcagattttgttttctgaagattcaacaaaactctttgtggcatcaaatcaagggtct
ctacatgtcattcggctcttggaaggaagcttcaagcacctgcatactttccagcctcag
tcagggacggtggagtccatgtgtcttttggctgtcagtcctgatgggaattggctagct
tcatcaggtaccagtgctggagtccatgtgtacaacataaaacatctaaagcttcactgc
acagtaccttcgtataatttccctgtgactgctttggccatcgctcccaataccaacaac
cttgtcattgctcattctgaccagcaggtatttgagtacagtatcccagacaaacagtat
acagagtggagccggaccatccagaagcaggggtttcattacctctggctccagagggat
actcccatcacacacatcagttttcatcccaagagaccaatgcacatccttcttcatgat
gcctacatgttctgcatcatcgacaagtcattgcctcttccaaatgacaaaaccttactc
tacaatccacttcctcccacgaaggaatcagatgttatcaggaggcgtaccgcccatgcc
tttaaaatttctaagatatataagcctctgcttttcatggatcttttggatgaaagaaca
ctggtggcagtagaacggcccctggatgacatcatcgctcagcttccaccacccatcaaa
aagaagaaatttgggacttaa
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