Neogale vison (American mink): 122911339
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Entry
122911339 CDS
T08764
Symbol
CTCF
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nvs03000
]
122911339 (CTCF)
03036 Chromosome and associated proteins [BR:
nvs03036
]
122911339 (CTCF)
Transcription factors [BR:
nvs03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
122911339 (CTCF)
Chromosome and associated proteins [BR:
nvs03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122911339 (CTCF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Zf-C2H2_ZNF451_C
zf-C2H2_ZN142
zf-C2H2_7th_ZNF462
zf-met
zf-C2HE
zf-C2H2_6
Zf-C2H2_ZNF451
zf-C2H2_15
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
122911339
NCBI-ProteinID:
XP_044111873
UniProt:
A0A8C7AV02
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All DBs
Position
7:complement(17970580..18025545)
Genome browser
AA seq
727 aa
AA seq
DB search
MEGEAVEAIVEESETFIKGKERKTYQRRREGGQEEDTCHLPQNQTDGGEVVQDVNSSVQM
VMMEQLDPTLLQMKTEVMEGTVAPEAEAAVDDTQIITLQVVNMEEQPINIGELQLVQVPV
PVTVPVATTSVEELQGAYENEVSKEGLAESEPMICHTLPLPEGFQVVKVGANGEVETLEQ
GELPPQEDPSWQKDPDYQPPAKKTKKTKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEV
NAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCG
RAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYAS
VEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSG
TMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERY
ALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDM
HFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENGGETKKSKRGRKR
KMRSKKEDSSDSENAEPDLDDNEDEEEPAVEIEPEPEPQPVTPAPPPAKKRRGRPPGRTN
QPKQTQPTAIIQVEDQNTGAIENIIVEVKKEPDAEPGEGEEEEAQPAATDAPNGDLTPEM
ILSMMDR
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgaggcggttgaagccattgttgaagagtctgaaactttcattaaaggaaag
gaaagaaagacttaccagagacgccgggaagggggccaggaagaggacacttgccacctg
ccccagaaccagactgatgggggtgaggtggtccaggatgtcaatagcagtgtacagatg
gtgatgatggaacagctggatcccacccttcttcagatgaagactgaagtaatggagggt
acagtcgctccagaagcagaggctgctgtggacgatacccagatcataaccttgcaggtt
gtaaatatggaggaacagcccataaacataggagagcttcagcttgtccaagtacccgtt
cctgtgactgtacctgttgccactacttcagtagaagaacttcagggggcttatgagaat
gaagtgtctaaagagggccttgcagaaagcgaacctatgatatgtcacaccttacctttg
cctgaagggtttcaagtggtgaaagtaggggccaatggagaggtggagacactagagcaa
ggagaacttccacctcaagaagatcctagttggcaaaaagacccagattatcagccacca
gccaaaaaaacaaagaaaaccaaaaagagcaaactgcgttacacagaggagggcaaagat
gtggatgtgtctgtctacgattttgaggaagagcagcaggagggtctgctatcggaggtt
aatgcagagaaagtggttggtaacatgaagcctccaaaaccaacaaaaattaaaaagaaa
ggtgtaaagaagacattccagtgtgagctttgcagttacacatgtccacggcgttcaaat
ttggatcgtcacatgaaaagtcacactgatgagagaccacacaagtgccatctctgtggc
agggcattcagaacagtcaccctcctgaggaatcaccttaacacacacacaggtactcgt
cctcacaagtgcccagactgtgacatggcctttgtgactagtggagaattggtgcggcat
cgtcgttataaacacacccatgagaagccatttaagtgttccatgtgcgattacgccagt
gtagaagtcagcaaattgaaacgtcacattcgctctcatactggggagcgtccgttccag
tgtagcttgtgcagttacgccagcagggacacatacaagctgaaaaggcacatgagaact
cattcaggggaaaaaccttatgaatgttatatttgtcatgctcggtttacccaaagtggt
accatgaagatgcacattttacagaagcacacagaaaatgtggccaaatttcactgtccc
cactgtgacactgtcatagcccgaaaaagtgatttgggtgtccacttgcgaaagcagcat
tcctacatcgagcaaggcaagaaatgtcgatactgcgatgctgtatttcatgagcgctat
gccctcatccagcatcagaagtcacacaagaacgagaagcgctttaagtgtgaccagtgt
gattacgcttgcagacaggagaggcacatgatcatgcacaagcgcacgcacaccggggag
aagccttacgcctgcagccactgcgacaagaccttccgccagaaacagctcctcgacatg
cacttcaaacgctatcatgaccccaactttgtccctgcggcctttgtctgttcgaagtgt
gggaagacctttacacgccggaataccatggcaagacatgctgacaattgtgctggtcca
gatggtgtagaaggggaaaatggaggggaaacaaagaagagtaaacgtggtagaaaaaga
aagatgcgttccaaaaaagaagactcctctgacagtgaaaatgctgagccagacctggat
gacaatgaggatgaggaagaacctgctgtggaaattgaacccgagccagagcctcagcct
gtgaccccagccccaccacctgccaaaaagcggagaggacgcccccctggcagaaccaac
cagcccaaacagacccagccaacagccatcatccaagtggaagaccagaatacaggtgca
attgagaacattatagttgaagtcaaaaaggagccagacgcggagcccggggagggggag
gaagaggaggcccagccagctgccacagacgcccccaacggagacctcacgcccgaaatg
atcctcagcatgatggaccggtga
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