Neogale vison (American mink): 122911453
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Entry
122911453 CDS
T08764
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nvs03036
]
122911453 (CHD9)
Chromosome and associated proteins [BR:
nvs03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122911453 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
122911453
NCBI-ProteinID:
XP_044112079
LinkDB
All DBs
Position
7:complement(29790873..30015297)
Genome browser
AA seq
2902 aa
AA seq
DB search
MTDPMMDFFDDANLFGETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQGTP
THQKITDYEQLNQFDSMKFHQVNQPFGSPAEHVLSPHSQFNCSPIHPQTQPNGLFPDVAD
GSPMWGHQTATSISNQNGSPFHQQGHSHSMHQNKSFVVHHDFALFQASEQQTQCTSLRSQ
QNRNNLNPGQNSLSQSKNFMDVNVSGPHRVSVNHPSQIPNASTSQQSLSMQQFSQTSNPS
VHFLKCSNHQEGNFNGPSPNMTSCSVSNSQQFSSHYSFSSNHVSPNSLLQASAVLAPNHT
NQTLSDFTGSNSFSPHRGIKQESTQHMLNPNTSLNSNNFQMLHSSHPQGNYSNSKLSPVH
MNFPDPVDSGTQMGHFNDHVETNGFSSLEENLLHQVESQTEPFTGLDPEDLLHEGLLPQF
DEAAFGQDHSSHVLDHDLERQFTSHLVTRPSDMTQTQLHGQARSWHSSLSNHQHLHDRNR
LYLQRQPPSSKKSDGSGTYTKLQNTQVRIMSEKKQRKKVESESKQEKANRIISEAIAKAK
ERGERNIPRVMSPENFPSASVEGKEEKKGRRMKSKPKDKESKKTKTCSKLKEKTKIGKLI
ITLGKKQKRKNESSDEMSDTEQMPQHTCKEEDSQKRRSNRQIKRKKYAEDAEGKQSEEEV
KGSMKIKKNSAPLPGEQPLQLFVENPSEEDAAIVDKILSSRIVKKEVSPGVMIDTEEFFV
KYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVEVDRV
LEVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQLQASRPDTRHLD
RPPANIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITF
LYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHGSLISRQMIQQYEMYFRDS
QGRIIRGAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNL
EHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPMM
LRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGAGQTNVPNLVNTMM
ELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGG
HKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCT
RAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFD
RASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIEDLLRRGAYGAIMEEEDEGSKFCEED
IDQILLRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAIS
GRNSLVIDTPRIRKQTRPFSATKDELAELSEAESEGDEKPKLRRPCDRSNGYGRTECFRV
EKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRALLAYCLVHYRGDEKIKGFIWDLIT
PTEDGQTRELQNHLGLSAPVPRGRKGKKVKTQTSSFDIQKAEWLRKYNPEQLLQDEGYKK
HIKHHCNKVLLRVRMLYYLKQEVIGNECQKVFDGVDASDIDVWVPEPDHSEVPAEWWDFD
ADKSLLIGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDYMDGDVEDPEYK
PAPALFKDDIEDDVSSPGDLVIADGDGQLMEGDKIYWPTQSALTTRLRRLITAYQRTNKN
RQIQQIQPTFSVPASVMQPLYEEATLNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFD
PDRGQFDWTKFRAMARLHKKTDDSLEKYLYAFMSMCRRVCRLPSKEELVDPNIFIQPITE
ERASRTLYRIELLRKVREQALRHPQLFERLKLCHPNPDLPVWWECGPHDRDLLIGAAKHG
VSRTDYHILRDPELSFMAAQRNYSQSKMAHSRTSTPLLQQYQVALSASPLTSLPRLLDAK
GIILEDMKVKSENLKEEPQSSEEESMSSEETRTLIKSEPVSPKNGVLPQATGDQKSGGKG
ETDRRMVAARTEPLTPNPASKKQRVHKRGSESSSESDSDSERSSCSSRSSSSSSSSSSCS
HSRSGSSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSEEEEVQKRAEGTPHVKAYD
EESVASLSTTQDETQDSFQMNNGTPESAYILQGGYMLAASYWPKDRVMINRLDSICQTVL
KGKWPSARRSYDANTVASFYTTKLLDSPGAATEYSEPSVPTPPGAGVKEEHDQSTQMSKV
KKHVREKEFTVKIKDEGGLKLTFQKQGLAQKRPLDSEDGALGQQQYLTRLRELQSASETS
LANFPKSTPVSGTSIQSTLGANGVRLDNQPIVKKRRGRRKNVEGVDILFFNRNKPPNHVT
LGLTASQISTGMTPALSYTQPQGIPDTESPVPVINLKDGTRLAGDDAPKRKDLEKWLKEH
PGYVEDLGAFIPRVQLHEGRPKQKRHRCRNPNKLDVNSLTGDERVQLINRRNARKVGGAF
APPLKDLCRFLKENSEYGVAPEWGDVVKQSGFLPESMFERILTGPVVREEVSRRGRRPKS
GIAKATAAAAAATATSVSGNPLLANGLLPGVDLTTLQALQQNLQNLQSLQVTAGLMGMPA
GLSSGGEAKNMAAMFPMLLSGMTGLPNLLGMGGLLTKPTESGTEEKKGNDSKELEGKKER
TESQNSENGGENSASGSPSTSSTAALSTAAAANPLALNPLLLSNILYPGMLLTPGLNLHM
PTSSQSNTFDVQKNRNSDLGSSKSQEVKEEESRGRDQEDKGGTAASPLNENSTDEGSEKA
DASSGSDSTSSSSEDSDSSNED
NT seq
8709 nt
NT seq
+upstream
nt +downstream
nt
atgacagatccaatgatggacttttttgatgatgccaatctttttggtgagaccttagaa
ggtttgtcagatgatgcatttgtacaaccaggacctgtttcactagttgatgaattgaac
ttaggtgcagaatttgagcctttgcacatagactcactgaaccatgttcaaggtactcca
acacatcagaagataactgattatgagcagttaaatcagtttgattcaatgaaatttcac
caagtcaatcagccttttggtagcccagctgaacatgtgttatctccacactctcagttt
aattgttctccgatccacccccaaacccagcccaatggtttgtttccagatgtagcagat
ggcagtccaatgtggggccatcagacagctaccagcatttccaatcaaaatgggtctcct
tttcaccaacaaggacattctcactctatgcatcaaaataaaagctttgtggtacaccat
gactttgccttatttcaggccagtgaacaacaaacacagtgcacttcactacgctcacaa
caaaatagaaataatcttaacccagggcagaattctctcagccagtctaaaaattttatg
gatgttaatgtttctggtccgcacagagtcagtgttaaccacccttcacaaatccctaat
gcatctacgtcgcaacagtctctttcgatgcagcagttttcccaaacgtcaaatccttca
gttcacttcctcaagtgtagcaatcatcaagaagggaatttcaatggaccttctccaaat
atgacttcttgttctgtcagtaattcacagcagttttcttcacattattccttctccagt
aatcatgtctcaccaaacagtcttctgcaggcctctgcagtgcttgcacctaatcacaca
aatcagactttatccgattttaccggaagtaactccttttcacctcataggggaatcaag
caagaatccactcagcatatgctaaatcccaatacatcgttgaattcaaataatttccaa
atgttgcattcatcacatcctcagggtaattatagcaattcaaaattatctcctgtgcac
atgaacttcccagatcctgttgactcaggaactcagatgggccatttcaatgatcatgta
gaaactaatggcttttcatctttagaagagaatttacttcatcaagtggagtctcaaact
gagccgtttacaggacttgacccagaagacctcctccacgagggtctccttccccagttt
gatgaagccgcatttggacaagatcattcaagtcatgtcttagatcatgaccttgaacgg
cagtttacttctcatcttgtaactcggccttcggatatgactcaaacacagctgcatggc
caggctcggagttggcactcttcgctttccaatcatcaacatttacatgacagaaatcgc
ctatatttacagcgacagcctccatcttccaagaagagtgatggttctgggacatatact
aagttgcagaatacccaggtgaggatcatgtccgagaagaagcagagaaaaaaagtggaa
tcagaaagcaagcaagaaaaggctaatcggataatatcagaggccatagcaaaagcaaag
gaacgtggggaacgcaatattcctcgagtaatgagtcctgaaaactttcctagtgcttca
gttgaaggaaaagaagaaaagaaaggtagacggatgaaatcgaagccaaaggacaaagag
agcaaaaaaacaaaaacttgttctaagttaaaagagaagacaaaaattggcaaactcatt
attacattgggtaagaaacaaaaaagaaagaatgagtcttcagatgagatgtctgataca
gagcagatgccacagcatacgtgcaaagaggaagactctcaaaaaagaagatcaaatcgt
caaattaaaagaaaaaaatatgcagaagatgcagaagggaagcaatctgaagaagaggtt
aaaggttctatgaaaataaaaaagaattcagctcctttacctggtgaacagcctttacag
ttatttgtggagaatccaagtgaagaagatgctgcaattgtagacaaaatactatcttct
agaattgtaaaaaaggaagtatcacctggagtaatgattgatacagaagaattttttgta
aaatacaagaattactcctatcttcactgtgagtgggccaccgagcagcagcttctgaaa
gataaaaggatccagcagaaaatcaaacgattcaaattgagacaagcacaaagagcacat
ttttttgctgatatggaagaggaaccatttaacccagactacgttgaagtagacagagta
ttagaagtctctttttgtgaagataaagatactggtgagcctgttatttactacttagta
aagtggtgctcattaccatacgaagatagtacatgggaactaaaagaagatgtagatctt
gcaaaaatagaagagtttgaacagttacaagcttcaaggcctgacacaagacatttggat
cgtcctcctgctaatatttggaaaaaaattgatcaatccagggactataaaaatggcaat
caactcagggaatatcaactggaaggactcaactggctcttgttcaattggtacaataga
cgaaactgcattttagcagatgaaatgggtcttggcaaaaccattcaatcaattacattc
ctctacgaaatccttctgactggtataagaggacctttcctgattattgctccgctttct
actattgcaaactgggagagagaatttcgtacgtggactgatattaatgttgtggtttat
catgggagcctgattagcagacagatgatacagcaatatgagatgtacttcagggactca
caggggcgtatcattcgaggagcttacagattccaagccatcatcaccacttttgaaatg
attcttggtggctgtggagaacttaatgcaattgaatggcgatgtgtgattattgatgaa
gcacataggttaaaaaataaaaattgtaaacttctagaaggtctgaaactcatgaatctg
gaacacaaggtgcttctgactggcacacctctccaaaatacagtagaagaactgttcagt
cttcttcactttctggaacctttaaggtttccttctgaatcaacatttatgcaagaattt
ggggatctgaaaacagaggagcaggtgcagaaacttcaggctattctaaagccaatgatg
ttgagaagattgaaagaagatgtggaaaagaagctggcaccaaaggaagaaaccatcatt
gaagtagaacttactaacattcagaagaaatactaccgggctattttggagaagaacttc
tcatttttatccaaaggagcagggcagactaatgtccctaacttggtcaataccatgatg
gagctcaggaaatgctgtaatcatccgtatcttatcaaaggtgctgaggagaaaatactt
ggagaatttagagatacatataatccagctgcttctgattttcatcttcaagcaatgatc
cagtctgctggtaaattggtccttattgataaattgcttcccaaaatgaaagccggcggt
cataaagtgctcatcttctctcagatggtacgctgcctggacatcctggaggactatctc
attcataaaagatacttatatgaacgaatcgatggaagggttagagggaatcttcgacaa
gctgctatagatcgatttagtaaacctgattcagatcgatttgttttccttctgtgtacc
cgagctggtgggttgggcatcaacctaactgctgctgatacgtgtataatttttgattct
gattggaatcctcagaatgacctgcaggcccaagctcgttgccacagaattggtcagaat
aaagcagttaaagtctaccgactagtaactcgtaactcatatgagagagagatgtttgac
cgagccagtctgaaactgggtctagataaggctgtgttacagagcatgagtggaagagaa
agtaatgttggtggtattcaacagctttccaaaaaggaaatagaagatctgcttcgaaga
ggtgcttacggtgccattatggaggaagaagatgaaggctctaaattctgtgaggaggat
atcgatcagattttactacgtcggacgaaaactataacaattgagtcagaaggacgtggg
tcaacatttgccaaggcaagctttgtggcatctgggaatcggacagatatttccttagat
gatcccaacttctggcaaaaatgggctaaaaaggcagaaatagatatagatgccatcagt
ggcagaaacagcttggttattgacactccaagaattaggaagcaaacaagaccctttagt
gccacaaaagatgaattggctgaattatctgaagccgaaagtgaaggagatgaaaagccc
aaactccggagaccctgtgaccgttccaacggctatggaagaactgaatgctttagagta
gagaaaaatcttctagtttatggatggggccgatggagagagattctgtctcacggccgt
tttaaaagacagctgaacgagcacgatgtagaaataatttgccgggccctcttagcatat
tgccttgttcactaccgaggagatgagaaaattaaaggcttcatatgggatctcattact
ccaacggaagatgggcagacacgagagctacagaatcacctaggcctatcagcccctgta
cccaggggtcgaaaagggaagaaagtgaagactcagacaagctcatttgatatacagaaa
gcagaatggcttcgaaaatacaatcctgagcagctacttcaagacgaaggatacaaaaaa
catataaaacaccactgtaataaggttttgcttcgtgtaagaatgctgtattatctaaag
caagaagtcattggaaacgagtgtcagaaagtatttgatggagtcgatgcaagtgacatt
gatgtttgggtcccagaaccagaccactcagaagttcctgctgaatggtgggattttgat
gctgataagtcacttcttattggagtctttaaacatggttatgaaaaatataacaccatc
cgagcagacccagcattatgcttcttggaaagagtgggaaaacctgatgagaaagcagtc
gctgcggaacagagggcaaatgattatatggatggggatgtggaagatccggaatacaaa
cctgccccagctctctttaaagatgatatagaggatgacgtgtcttcacctggagatctt
gttatagcagatggagatggtcagctgatggaaggtgataaaatttattggccgactcag
tcagctttaactactcgtttgaggcgtctcatcactgcatatcagcgtactaataaaaac
agacaaatccagcagatacagcctactttctcagtgcctgccagtgtaatgcagcctctt
tacgaagaagccactctcaatcctaaaatggcagccaagatagaaagacagcagagatgg
acaagaagagaagaagctgacttttatagagtagtgtctacatttggagtggtatttgac
cctgatagaggccaatttgattggacaaaatttagagctatggctaggctgcataagaaa
accgatgatagcttggagaagtatttgtacgcattcatgtctatgtgtcggagggtttgt
cgtcttccttccaaagaagaattggtggatccaaatatttttatccagccaatcacagaa
gaacgtgcttctaggactttgtaccgtattgaacttctaaggaaagtacgggaacaggcc
ctccggcacccacaactgtttgaacgcttgaagctttgccatccaaatccagacttacca
gtctggtgggaatgtggccctcacgatagggacttgctcattggagctgctaaacacggg
gtgagccgaacagactatcacattcttcgtgatcctgaactctcctttatggcagctcaa
aggaactacagtcaaagtaagatggctcattcaaggacttctaccccacttttacagcaa
tatcaagtagcactttctgcttctcctcttacctctctacctaggctcctagatgctaaa
ggtattattctagaggatatgaaagttaaaagtgaaaatcttaaagaggagcctcagtct
tctgaagaagaatctatgtcttctgaggaaaccaggacactaataaagtctgagcctgta
agtccaaagaacggtgttttaccgcaggccactggagaccagaaatctggtggaaaaggt
gaaacagacagacgcatggttgcagccagaacagaacccctcactccaaacccagcttct
aagaaacagcgagtccacaaaagaggatccgaatctagttctgagtctgactctgattct
gagagatcatcctgttcttccagatcatcttcttcctcgtcttcctcctcctcttgctcc
cactctcgatcaggctctagttcttcctcatcctcctcttgttcttcagcatcgtcttca
tcctcatcctcatcctcttcctcatcatcctcctcctcatcttcatcagaagaaagtgac
agtgaagaagaagaagtccaaaagcgagcagaaggtacccctcacgtgaaagcctatgat
gaggagagtgtcgcgtcactgagcactacccaggacgagacccaggatagtttccagatg
aacaatgggacgccagaatccgcttacatcttacaagggggatacatgctagcagcttca
tattggccaaaggaccgcgtgatgatcaaccggctggacagtatttgtcaaacagtgctg
aaagggaagtggccttcagctagaagaagttatgatgccaacacagtggcttctttctat
accacaaaactgctggacagtcctggcgcagctacagaatacagtgaacccagtgtaccc
actccgccaggtgccggtgttaaagaagaacacgatcagtcaacacagatgtcaaaggtg
aagaagcatgtacgagaaaaggagtttacagtgaaaatcaaagacgaaggtggtttgaag
ttgacatttcagaagcaagggcttgctcagaagagaccactggacagtgaagacggtgct
ctgggacagcagcagtatctgactcggctccgggaactgcagagcgcgtcggagaccagc
ctcgccaatttccccaaatccacaccagtatcaggtacttccattcagtcaacccttggt
gccaatggcgttagattagacaaccagcctatcgtcaaaaaaaggcggggaagaaggaag
aatgtagaaggtgttgacatcctcttttttaacagaaataaaccacctaaccatgttact
ttgggcttaaccgcctcacagatttctacagggatgactccagcactgtcctacactcaa
cctcaaggaattcctgatacggaaagtccagttccagtcattaacctcaaagacgggaca
agacttgcaggcgatgatgcgccaaagagaaaggatttggaaaagtggcttaaggagcac
ccaggttatgtggaagatttaggagcttttattcctagagtgcagctccatgaagggagg
cctaaacaaaaaaggcatcgttgcagaaaccctaataaactcgatgttaatagtcttact
ggagacgaacgtgttcagctgatcaacagaagaaatgccaggaaggttggaggtgccttt
gctccccctttgaaagacttgtgtagattcctaaaagaaaattcggaatacggagtagct
cctgaatggggagatgttgttaagcagtctggatttcttccagagagtatgtttgagcgc
attctcaccggtcctgttgtgagagaagaagtcagcaggcgtgggcgacggcctaaaagt
ggaattgccaaggccacagcggcggcggcggcagcaactgccaccagcgtgtcaggcaat
cctttgttagccaacggattacttccaggtgtggatctcacaacccttcaggccttacaa
caaaacctacaaaacttgcagtctctgcaagtaaccgcggggctgatgggaatgcctgcc
ggtctttcttctggaggagaagctaaaaacatggccgccatgttccccatgctgctgtca
ggaatgactggcttaccaaatctgctgggcatgggggggctcctgaccaagcctactgaa
tctggaaccgaagagaaaaagggaaatgactcgaaggagctagaaggaaaaaaagaaagg
acagagagtcaaaattcagagaacgggggagaaaactctgcatcgggttctccttccaca
tcctctactgctgcattaagtacagctgcagccgccaacccgctagctcttaacccacta
ctgctgtctaatatactctacccagggatgctgctcactccaggccttaatctccacatg
ccaacttcgtcccagtccaatactttcgacgtacagaaaaacagaaacagtgacctgggc
tcgtctaagtcccaggaagtaaaggaggaagagtccagaggtagagaccaggaggacaaa
gggggaactgcagcaagtcctctcaacgagaacagcacagatgagggttcagagaaagct
gatgcttcgtctggatctgacagtacgtcgtcatcctccgaggattcagattcgagtaac
gaagactga
DBGET
integrated database retrieval system
