Neogale vison (American mink): 122911777
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Entry
122911777 CDS
T08764
Symbol
SHANK1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
nvs
Neogale vison (American mink)
Pathway
nvs04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
122911777 (SHANK1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
Ank_5
SH3_2
SAM_2
PDZ_6
PDZ
SH3_1
SH3_9
FERM_f0
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
122911777
NCBI-ProteinID:
XP_044112723
LinkDB
All DBs
Position
7:50074282..50117528
Genome browser
AA seq
2177 aa
AA seq
DB search
MTHSPASSEDEERHSASECPEGGSESDSSPDGPSRGPRGTRGQGSGAPGSLASTRGLQGR
SMSVPDDAHFSMMVFRIGIPDLHQTKCLRFNPDATIWTAKQQVLCALSESLQDVLNYGLF
QPATSGRDANFLEEERLLREYPQSFEKGVPYLEFRYKTRVYKQTNLDEKQLAKLHTKTGL
KKFLEYVQLGTSDKVARLLDKGLDPNYHDSDSGETPLTLAAQTEGSVEVIRTLCLGGAHI
DFRARDGMTALHKAACARHCLALTALLDLGGSPNYKDRRGLTPLFHTAMVGGDPRCCELL
LYNRAQLGIADENGWQEIHQACQRGHSQHLEHLLFYGAEPGAQNASGNTALHICALYNKE
TCARILLYRGANKDVKNNNGQTPFQVAVIAGNFELGELIRNHREQDVVPFQESPKYAARR
RGPPGAGLTVPPALLRANSDTSMALPDWMVFAAPGTSSSGAPGPTSGPQGQSQPSAPSTK
LSSGTLRSASSPRGARARSPSRGRHPEEAKRQPRGRPSSSGTPREGPAGGTGGSGGPGGS
LGSRGRRRKLYSAVPGRSFMAVKSYQAQAEGEISLSKGEKIKVLSIGEGGFWEGQVKGRV
GWFPSDCLEEVANRSQEGKQESRSDKAKRLFRHYTVGSYDSFDAPRSLMDGIGPGSDYII
KEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMG
DFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTRHPDMDEAVHKKAPQQAKRLPP
PAISLRSKSMTSELEEMEYEQQPAPVPSMEKKRTVYQMALNKLDEILAAAQQTISASESP
GPGGLASLGKHRPKGFFATESSFDPHHRSQPSYERPSYLPPGPGLMLRQKSIGAAEDDRP
YLAPPAMKFSRSLSVPGSEDIPPPPTTSPPEPPYSTPPAPSSSGRLTPSPRGGPFNPSSG
GPLPSSSPASFDGPSPPDTRVGSREKSLYHSGPLPPAHHHPPHHHHHHAPPPQPHHHHAH
PPHPPEMETGGSPDDPPPRLALGPQPSLRGWRGGGPSPTPGAPSPSHHGSGGGGISSSQA
PALRYFQLPPRAASAAMYVPARSGRGRKGPLVKQTKVEGEPQKGGGLPAAASPTSPASPQ
PPPAAAAPSEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEPPTQPEAAGGGGGGGGGGG
GGGSGSAGGSSAPSPAPAMSPVPPSPSPVPTPTSPSGPATLDFTSQFGAALVGAARREGG
WQNEARRRSTLFLSTDAGDEDGGDSGLGPGAPPGPRLRHSKSIDEGMFSAEPYLRLESAG
AGSGGGYGAYAAGSRAYGGSGGSSAFTSFLPPRPLVHPLTGKALDPASPLGLALAARERA
LKESSEGGGPPQPPPRPPSPRYEAPPPTPHHHSPHAHHEPVLRLWGASPPDPARRELGYR
AGLGSQEKSLPASPPAARRSLLHRLPPTAPGVGPLLLQLGPEPPPPHPGVSKAWRSGAPE
EPERLPLHVRFLENCQPRASGAGGRGPPSEDGPGVPPPSPRRSVPPSPTSPRGTEENGLP
LLVLPPPAPSVDVEDGEFLFVEPLPPPLEFSNSFEKPESPLTPGPPHPLPDPPTPTTPLP
PVPPPAVAAAPPTLDSTASSLTSYDSEVATLTQGAPVAPGDPPPPGPPAPAAPAPPAPQP
GPDPPPGTDSGIEEVDSRSSSDHPLETISSASTLSSLSAEGGGPAGGGGGGGGASVASGP
ELLDTYVAYLDGQAFGGSGTPGPPYPPQLMTPSKLRGRALGTSGGLRPGPSGGLRDPVTP
TSPTVSVTGAGTDGLLALSGCTGPSTAGMAGGPVAIEPEGPPVPLPSASSLPRKLLPWEE
GPGPPPPPLPGPLAQPQASALATVKASIISELSSKLQQFGGSSAAGGALPWARGGSGGSG
DSHHGGSSYVPERTSSLQRQRLSEDSQSSLLSKPVSSLFQNWPKPPLPPLPTGSGVPPSA
AAASGATSPSASSTSTRHLQGVEFEMRPPLLRRAPSPSLLPASEHKVSPAPRPSSLPILP
SGPLYPGLFDIRSSPTGGAGGSADPFAPVFVPPHPGMSGGLGGALSGASRSLSPTRLLSL
PPDKPFGAKPLGFWTKFDVADWLEWLGLAEHRAQFLDHEIDGSHLPALTKEDYVDLGVTR
VGHRMNIDRALKFFLER
NT seq
6534 nt
NT seq
+upstream
nt +downstream
nt
atgacccacagccccgcgtcaagcgaggacgaggaacgccacagtgccagcgagtgtccc
gaggggggctcagagtccgacagctccccagacgggcccagcagaggcccccgggggacc
cggggccagggcagcggagcacctggtagtctggcctccacccgaggcctccagggccgc
tccatgtctgtcccagacgacgcccacttcagcatgatggtcttcaggattggcatcccg
gacctgcaccagacaaaatgtctgcgcttcaaccctgatgccaccatctggacagccaag
cagcaggtgctctgcgccctgagtgagagcctgcaggatgtgcttaactacggtctgttc
cagccggccacctcaggccgcgatgccaacttcctggaggaggagcggctgctccgggag
taccctcagtcttttgagaagggggtgccctacctggagttccgatataagacccgggtt
tacaagcagaccaacctggatgagaagcagctggccaaattgcacacaaagacggggttg
aagaagttcctggagtacgtgcagctcgggacgtctgacaaggtggcgcggctgctggac
aaggggctggaccccaattatcatgactcggattcaggagagacccccctgactctggct
gcccagacggaaggctccgtggaagtgattcgaaccctgtgcctgggaggggcccacatc
gacttccgagcccgggatggcatgacagcgctgcacaaagctgcatgtgcccgtcattgc
ctcgctctcacggcactcctggaccttgggggctcccccaactacaaggatcgccgaggc
ctgacccctctgttccatacggctatggtggggggcgacccccgctgctgtgagctgctc
ctttacaacagggcccagctgggcatagctgatgagaacggctggcaggagattcaccag
gcctgccagcggggtcattctcagcacctggaacacctgctcttctacggggctgagcct
ggagcccagaacgcctcggggaacacggcattgcacatctgcgccctctacaataaggag
acctgtgctcggattctcctctatcgaggagccaacaaggatgtgaagaataacaacgga
cagacccccttccaggtggcagtgatcgctgggaattttgaactgggggagttgatccga
aaccatcgagaacaggatgtggtgcccttccaggagtcccccaagtatgcagcccggcga
cggggacccccaggcgcagggctgacggtgcccccagcgctgcttcgggccaacagtgat
accagcatggccctgcccgactggatggtgtttgccgccccggggacctcatcctctggg
gcccctggccctacttcagggccccagggccagtcacagccctcggcccctagcaccaag
ctcagcagtgggaccctccgaagtgccagcagcccccggggtgcacgggctcgctcccca
tcccgcgggaggcaccctgaagaggccaagaggcagccccgtggacggcccagctccagc
gggacgcccagggaagggccggcagggggcacggggggctcggggggccctgggggctcc
ctgggcagccgcgggaggcgtaggaagctctactcagccgtacctggacgctccttcatg
gccgtgaagtcctaccaggcccaagcggagggggagatctccctgagcaagggggagaag
atcaaagtgcttagcatcggggaaggaggcttctgggaaggccaggtcaaaggtcgtgtt
ggctggtttccctctgactgcctagaagaggtggcgaaccgctcccaggaaggaaaacaa
gaaagccgcagtgacaaggcaaagagactcttccggcattataccgtgggctcctacgac
agctttgatgccccaagaagcttgatggatgggattggcccagggagcgattacatcatt
aaggagaagacagtcttgctgcagaagaaggacagtgaggggtttgggttcgtgctccgg
ggggccaaggcgcagacccccatcgaggagttcacccccactccggccttcccggcgctg
cagtatctggagtctgtggatgaggggggtgtggcatggcgagctggactgcggatggga
gacttcctcatcgaggtgaacgggcagaatgtggtgaaggttggccaccggcaggtggtg
aacatgatccgacaagggggcaacacgctgatggtcaaggtggtgatggtcaccaggcac
ccggacatggatgaggctgtccataagaaagcaccccagcaggcgaagcggctcccgcct
ccagccatttctctgcgttcaaagtctatgacctcagagctggaggagatggagtacgag
cagcagccggcgccggtgcccagcatggagaaaaagcggaccgtgtatcagatggcactc
aacaaactggatgaaattttggcggcagctcagcagaccatcagtgcaagcgagagtcct
ggacctggtggccttgcgtcgctgggcaaacaccggcccaaaggcttctttgccactgag
tcaagctttgatccgcaccaccgctcgcagccgagttatgaacgtccttcttacctgcct
ccaggacctgggcttatgctccggcaaaaatctattggggctgcagaagatgatagaccg
tacctagcacccccagccatgaagttcagccgcagcctgtctgtgcctggctcggaggac
atccccccaccgcccaccacgtccccacccgagcccccctacagcacacctccagccccc
tcctcctccggccgcctcactccatcccccaggggagggcccttcaaccccagttcgggt
ggccccctcccgtcctcttcccccgcatcctttgatggaccctcccctcccgacacgcgt
gtagggagccgtgagaaaagcctgtaccacagcggacccctgccccccgcccaccaccac
ccgccccaccaccaccaccatcacgccccgcccccccagcctcaccaccaccacgcccac
ccccctcatcccccggagatggagacgggcggctcccccgacgaccccccaccccgactg
gctctggggccccagcccagcctgcgcggctggaggggcggcgggcccagccccaccccg
ggggccccgtccccgtcgcaccacggcagcgggggcggaggcatcagctcctcccaggcc
ccggccctgcgctacttccagctgccccccagggcggccagcgcggccatgtacgtgcca
gcccgctcgggccgcgggcgcaaggggcccctggtcaagcagaccaaagtcgaaggtgag
cctcagaagggaggcggcctccctgccgccgcctcgcccacgtctccggcgtccccgcag
ccgccgcccgccgcggccgccccctcggagaagaactccatccccatccccaccatcatc
atcaaggccccgtccaccagtagcagcggccgcagcagccagggcagcagcaccgaggcc
gagcccccaacccagcccgaggctgcgggcggcggcggcggcggcggcggcggcggcggc
ggcggcggcagcggcagcgctggaggctcctcggcgccgagccccgccccggccatgtcg
ccggtgccgccgtccccctcgcccgtgcccacccccacctcgcccagcggcccggccacc
ctggatttcaccagccagttcggggcggccctggtgggggcggcccggagggaagggggc
tggcagaacgaagcccgccggcggtccacgctcttcctttccaccgacgcgggggacgag
gatggcggcgacagcgggctgggcccaggggcgcccccgggtccccggctgcgccactcg
aagtccattgatgaaggcatgttctccgccgagccctatctgcggctggagtctgctggc
gcggggagtggcggtggctacggggcttacgcggccggcagccgcgcctacgggggcagc
gggggcagcagcgccttcaccagcttcctgccgccccggcccctggtccacccgctgacc
ggcaaggccctggaccccgcctcccctctcggactggccctggccgcccgagagcgggcg
ctgaaggagtcctcggagggtggtgggcccccccagccccctccaaggcccccatcgccc
cgctatgaggccccaccgcccaccccacaccaccactcgccccacgcccaccatgagccg
gtgctgcgtctctggggggcctcaccgccggaccccgcccgtcgggagctggggtaccgt
gcagggctgggcagccaggagaagtcccttccggccagccctccagctgcccgacgctcc
ttgctgcaccgcttgccccccacagctcctggggtcgggcccctcctcctgcagctgggg
ccagagcccccgcccccgcacccgggggtgagcaaggcgtggaggtcgggagcccctgag
gagccggagcggctgcccctgcacgtgcggttccttgagaactgccagcccagagccagt
ggggcggggggaaggggacccccctcggaagacgggccaggggttccaccgcccagcccg
cgccgctccgtaccgccctcaccgacctccccgcggggtactgaagagaacgggcttccc
ctgctggtcttgccgccccctgctccctcggtggatgtggaagatggcgaattcctcttt
gtggaaccgttgcctccgcctctggagttctccaacagcttcgagaagccagagtcgccc
ctcacacccgggcccccccatccgctgccggacccacccaccccaaccaccccattgccc
ccagtgccaccacctgctgtcgccgctgcacctcccaccctggactccacggcatccagc
ctgacttcctatgacagtgaggtggccacactgacccagggggcccccgtggctcctggg
gaccctcctccaccaggcccaccggccccggctgcccctgctcccccagcgccacagcct
ggcccagacccaccacccggcacagattcaggaatcgaggaggtagacagtcggagcagc
agcgaccacccgctggagaccatcagtagcgcgtccacactgagcagcctttctgcggaa
ggcggtggccctgcaggaggtggtggtggaggcggtggggccagtgtggccagtgggcca
gagcttctggacacatacgtggcctacctggacggccaggccttcggggggagtgggact
cctggcccaccgtatcccccacagctcatgactccttctaagctccggggccgggctctg
gggaccagtggaggcctgaggcctggccccagtgggggactccgggaccctgtcactccc
accagccccactgtctctgtgacgggagctggaacagatgggctgctggccctgagtggt
tgcacgggaccctcgacggcgggtatggctgggggtccagtggcgatagagccagaaggc
ccaccagtgcccttgccatcagcctcctctttgcctcggaagctgctaccctgggaggag
ggcccgggcccaccgccaccacccctgcccgggcccctggcccagcctcaggcctcagcc
ttggccacagtaaaagccagcatcatcagtgaactcagctccaagcttcaacaatttggg
ggctcctcggcagctggtggcgctctgccctgggcccggggaggcagcgggggaagcggg
gacagtcaccacgggggatccagctacgtccctgagaggacctcttccctgcagcggcag
agactctctgaagactcccagtcctcgctcctctccaaacccgtcagcagcctgtttcag
aactggcccaaaccacctctgccgccactccccacaggaagcggggtccccccttcagct
gctgcagcgtcgggggccacctcaccctcagcctcctccacgtccacccgccacctccag
ggcgtggagttcgagatgcggcctcctctgctccgccgggcccccagcccctcactgctg
cccgcctcggagcacaaggtcagccctgcgcccaggccctcgtccctgcccatcctgcct
tccggacccctgtatccgggcctctttgacatccgcagctccccaaccggaggggcagga
ggttcagctgatcctttcgcccctgtctttgtgccaccacaccctgggatgtctgggggg
cttggcggggccttgtcaggggcctcccgctccctctcaccaacccgcctgctttcgctg
cccccggacaagcccttcggcgctaagcctctggggttctggaccaagttcgatgtggct
gattggctcgagtggctggggttggctgagcaccgggcgcagttcctggaccacgagatc
gatggctcccatctgcctgccttgaccaaggaggattacgtcgatctgggtgtgaccagg
gtgggccaccgcatgaacatcgaccgggctctcaaatttttcctggagaggtga
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