Neogale vison (American mink): 122911786
Help
Entry
122911786 CDS
T08764
Symbol
POLD1
Name
(RefSeq) DNA polymerase delta catalytic subunit isoform X1
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03030
DNA replication
nvs03410
Base excision repair
nvs03420
Nucleotide excision repair
nvs03430
Mismatch repair
nvs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122911786 (POLD1)
03410 Base excision repair
122911786 (POLD1)
03420 Nucleotide excision repair
122911786 (POLD1)
03430 Mismatch repair
122911786 (POLD1)
03440 Homologous recombination
122911786 (POLD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nvs03032
]
122911786 (POLD1)
03400 DNA repair and recombination proteins [BR:
nvs03400
]
122911786 (POLD1)
Enzymes [BR:
nvs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
122911786 (POLD1)
DNA replication proteins [BR:
nvs03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
122911786 (POLD1)
DNA repair and recombination proteins [BR:
nvs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
122911786 (POLD1)
MMR (mismatch excision repair)
DNA polymerase delta complex
122911786 (POLD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
DNA_pol_B_exo2
Motif
Other DBs
NCBI-GeneID:
122911786
NCBI-ProteinID:
XP_044112739
LinkDB
All DBs
Position
7:complement(50285412..50308222)
Genome browser
AA seq
1107 aa
AA seq
DB search
MDGKRRPGPGPGVPPKRARGGLWDEEEPCQPSQFEEELALMEEMEAEHRLQEQEEELVQP
GLDGAADGQFSPTAIDPRWLRPTPPPLDPQTEPLIFQQLEIDHYVGPAQPLPWTPQPSHN
PVPVLRAFGVTDEGVSVCCHIQGFAPYFYTPAPPGFGPNHLGELQRELNAAISRDQRGGK
ELMGPAVLSVELCSRESMFGYHGYGPSPFLRITLALPRLMAPARRLLEQGIRVAGLGTPS
FAPYEANVDFEIRFMVDTDIVGCNWLELPAGKYVLRSEGKATLCQLEADVLWSDVVSHPP
EGQWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPC
APILGAKVQSYEREEELLQAWSAFIRAMDPDVITGYNIQNFDLPYLISRAQTLKVHTFPF
LGRVSGLRSNIRDSSFQSKQTGRRDSKVVSMVGRVQMDMLQVLLREHKLRSYTLNAVSFH
FLGEQKEDVQHSIITDLQNGNDQTRRRLAVYCLKDAFLPLRLLERLMVLVNAMEMARVTG
VPLGYLLSRGQQVKVVSQLLRQAMREGLLMPVVKTEGGEDYTGATVIEPLKGYYDVPIAT
LDFSSLYPSIMMAHNLCYTTLLRPGAAQRLGLTEDQFIKTPTGDEFVKTSVRKGLLPQIL
ENLLSARKRAKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSV
TGFGRQMIEKTKQLVESKYTVENGYGANAKVVYGDTDSVMCRFGVSSVAEAMALGREAAD
WVSGHFPPPIRLEFEKVYFPYLLISKKRYAGLLFSSRPDTHDRMDCKGLEAVRRDNCPLV
ANLVTASLRRLLIDRDPAGAVAHAQDVISDLLCNRIDISQLVITKELTRAAADYAGKQAH
VELAERMRKRDPGSAPSLGDRVPYVIISAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQ
QLAKPLLRIFEPILGEGRAEAVLLRGDHTRCKTVLTGKVGGLLAFAKRHSCCIGCRTVLN
HQGAVCKFCQPRESELYQKEVSHLNALEERFSRLWTQCQRCQGSLHEDVICTSRDCPIFY
MRKKVRKDLEDQEQLLRRFGPPGPEAW
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atggatggcaagcggcggccaggcccagggccgggggtgcccccaaagcgggcccgtggg
ggcctctgggatgaggaggagccatgtcagccatcccagtttgaggaggagctggcgctg
atggaggagatggaggccgagcaccgactgcaggaacaggaggaggagttggtgcagccg
ggcctggatggagcagcagatgggcagttctccccaacagccatagatccccgctggttg
cggcccacaccaccccctctggatccccaaacagagcctctcatcttccagcagttggag
attgaccattatgtgggcccagcacagcccctgccttggacaccccagccgtcccacaac
cccgtgccagtgctccgtgcctttggagtcaccgacgagggcgtgtcggtctgctgccac
atccagggcttcgcaccctacttctacaccccggcgccccctggttttgggcccaaccac
ctgggtgagctgcagcgggagctgaatgccgccatcagcagggaccaacgtggagggaag
gagctcatggggccggcagtgctgtccgtggagctgtgctcccgggagagcatgttcggg
taccatgggtatggcccctccccatttctacgaatcaccctggcgctgccgcgcctcatg
gcccctgcccgccgcctcctggagcagggcatccgtgtggcgggcctgggcacccccagc
ttcgcaccttatgaggccaatgtcgactttgagatccggttcatggtggacacagacatt
gtcggctgcaactggttggaactcccagcagggaaatatgtcctgaggtcggaggggaag
gccacactgtgtcagctagaggcagacgtgctgtggtctgacgtggtcagtcacccgcca
gaagggcagtggcagcgaatcgcacccctgcgcgtgctcagctttgacattgagtgcgct
ggtcgcaaaggcatcttccctgaacctgagcgggaccctgtgatccagatctgctcactg
ggcctgcgctggggtgagccggagcccttcctgcgcctggcactcaccctacggccctgt
gcccctatcctgggtgccaaagtacagagctacgagcgggaggaggagctgctccaggca
tggtcagccttcattcgtgccatggaccccgacgtgatcaccggctacaacatacagaac
tttgaccttccgtacctcatctctcgggcccagactctcaaggtgcacacgttccccttc
ctgggccgcgtgtctggcctccgctccaacatccgggattcgtccttccagtccaagcag
accggccggcgggacagcaaggtggtcagcatggtgggccgcgtgcagatggacatgttg
caggtgctgctgcgtgagcacaagctccgctcctacacactcaatgccgtgagcttccac
ttcctgggcgagcagaaggaggacgtgcagcacagcatcatcaccgacctgcagaatggg
aatgaccagacacgccgccggctggcggtgtactgcctcaaggatgccttcctgcccctg
cggctactggagcggctaatggtgctggtcaatgccatggagatggcacgagtcactggc
gtgcccctaggctacctgctcagccgaggccagcaggtcaaggtcgtgtcccagctactg
cggcaggccatgcgcgagggactgctgatgcccgtggtgaagacagagggtggcgaggac
tacacgggggccacagtcatcgagcccctcaaagggtactatgatgtccccattgccacc
ctggacttctcctctctgtacccgtccatcatgatggcccacaacctgtgctataccacg
cttctgcggcctggggccgcccaaagactggggctgactgaggatcagttcatcaagaca
cccacaggggatgagtttgtgaagacatcagtgcggaaagggctgctgccccagatcctg
gagaacctgctcagtgcccggaagagggccaaggctgagctggccaaggagacagacccc
ctgcgtcgccaagtcttggacgggcggcagctggcattgaaagtgagcgccaattctgta
tatggcttcactggtgcccaggtgggcaagctgccatgcctggagatctcccagagcgtc
actgggttcgggcgccagatgattgagaaaacaaagcagctggtggagtccaagtacaca
gtggagaatggctatggcgccaacgccaaggtggtgtatggtgacactgactcagtcatg
tgccgatttggtgtctcgtctgtggcggaggcaatggctctggggcgggaggctgctgac
tgggtatcaggccactttcccccgcccatccggctggagtttgaaaaggtctactttccc
tacctgctcatcagcaagaagcggtatgctggcctgctcttctcctcccggcctgatact
cacgaccggatggactgcaagggcctagaggccgtgcgcagggacaactgcccccttgtg
gccaaccttgtcactgcctccctgcgccgcctgctcattgaccgggacccggcgggcgct
gtggcccacgcacaggacgtcatctccgacttgctatgtaaccgcattgacatctcccag
ctggtcatcaccaaggagctgacccgcgcggctgctgactacgccggcaaacaggcccat
gtggagctggctgagaggatgaggaagcgggaccccgggagtgcgcccagcttgggcgac
cgtgtcccctacgtgatcatcagtgctgctaagggcgtggctgcctacatgaagtccgag
gaccccctctttgtgctggagcacagcctgcccatcgacacacagtactacctggagcag
cagcttgccaagccgctcctgcgcatctttgagcccatcctgggcgagggccgtgccgaa
gccgtgctgctgaggggtgaccacacacgctgcaagacggtgctcacgggcaaggtgggc
ggccttctggcctttgccaaacgccacagctgctgtattggctgccgcaccgtcctcaac
caccagggagccgtgtgcaagttctgccagcctcgggagtctgagctctaccagaaggag
gtgtcccacctgaacgccctggaggagcgcttctcgcgcctctggacccagtgccagcgc
tgccagggcagcctgcacgaggacgtcatctgcaccagccgggactgccccatcttttac
atgcgcaagaaggtgcggaaggacctggaagaccaggagcagctactgaggcgctttggc
cctcccggccctgaggcctggtga
DBGET
integrated database retrieval system
