Neogale vison (American mink): 122911945
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Entry
122911945 CDS
T08764
Symbol
ERCC2
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD isoform X1
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03022
Basal transcription factors
nvs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122911945 (ERCC2)
09124 Replication and repair
03420 Nucleotide excision repair
122911945 (ERCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nvs03021
]
122911945 (ERCC2)
03036 Chromosome and associated proteins [BR:
nvs03036
]
122911945 (ERCC2)
03400 DNA repair and recombination proteins [BR:
nvs03400
]
122911945 (ERCC2)
Enzymes [BR:
nvs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
122911945 (ERCC2)
Transcription machinery [BR:
nvs03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
122911945 (ERCC2)
Chromosome and associated proteins [BR:
nvs03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122911945 (ERCC2)
DNA repair and recombination proteins [BR:
nvs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
122911945 (ERCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
ResIII
DEAD
AAA_22
SesA
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
122911945
NCBI-ProteinID:
XP_044113052
LinkDB
All DBs
Position
7:53899884..53915821
Genome browser
AA seq
760 aa
AA seq
DB search
MKLNVDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQ
RAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSRKNLCIHPE
VMPLRFGKDVDGKCHSLTASYVRAQYQQDPSLPHCRFYEEFDVHGRQVPLPAGIYNLDDL
KALGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKIAELVSKELARKAVVVFDEAHNID
NVCIDSMSVNLTRRTLDRCQGNLETLQKTVLRIKETDEQRLREEYRRLVEGLREASAARE
TDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSG
LAQRVCIQRKPLRFCAERLRSLLHTLEIADLADFSPLTLLANFATLVSTYAKGFTIIIEP
FDDRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMAT
FTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFT
SYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVA
RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA
AQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYF
LRQMAQPFHREDQLGLSLLSLEQLESEETLRRIEQIAQQL
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaacgtggacgggctgctggtctacttcccttacgactacatctacccggag
cagttctcctacatgctggagctcaagcgcacgctggacgccaagggtcatggcgtcctg
gagatgccctcaggcactgggaagacagtgtccctgttggccctgatcatggcataccag
agggcatatccactggaggtgactaagctcatctactgctcgaggacggtgcctgaaatt
gagaaggtgatcgaagagctgcgaaagttgctcaacttctatgagaagcaggagggtgag
aagctgccgtttttggggctggctctgagctcccggaagaacctgtgtattcatcctgag
gtgatgcccctgcgctttgggaaagacgttgacgggaaatgccacagcctcacagcctca
tatgtgcgggcgcagtaccagcaggaccccagcctgccccactgccgcttctacgaggag
tttgatgtccatgggcgccaggtgcctctccctgctgggatctacaacctggatgacctg
aaggccttggggcggcgccagggctggtgcccctacttccttgcccggtattcgatcctg
catgccaacgtggtggtttatagctaccattacctcttggaccccaagattgcagagctg
gtgtccaaggagctggcccgcaaggccgttgtggtcttcgacgaggcccacaacatcgac
aacgtctgcatcgactccatgagtgtcaacctcacccgtcggaccctggaccgctgccag
ggcaacctggagaccttgcagaagacggtgctcaggatcaaggagacggatgagcagcgg
ctgcgggaggagtaccgccgcctggtggaggggctgcgggaggccagtgcggcgcgggag
accgacgcccacctggccaaccccgtgcttccggatgaggtgctacaggaggccgtacca
ggctccatccgcacggcggagcacttcctgggcttcctgcggcggctgctggagtatgtc
aagtggcggctgcgggtccagcacgtggtgcaggagagccccccggccttcctcagcggc
ctggcccagcgcgtgtgcatccagcgcaagcccctcagattctgtgccgaacgtctccgc
tccctcctgcacaccctggagattgctgacctcgccgacttctctcccctcacccttctg
gctaactttgccaccctcgtcagcacttatgccaaaggtttcaccatcatcattgagcct
tttgatgacaggacccccaccattgccaaccccatcctgcacttcagctgcatggatgcc
tcactggccatcaaacccgtgttcgagcgcttccagtcagtgatcatcacatcagggacg
ctgtcccccctggacatctaccccaagattctggacttccaccctgtcaccatggcaacc
ttcaccatgacgctggcccgggtctgcctctgccccatgatcatcggtcgtggcaatgac
caggtggccatcagctccaaatttgagacccgggaggatattgccgtgatccggaactat
gggaacctcctgctggagatgtccgccgtggtccccgacggcatcgtggccttctttacc
agctaccagtacatggagagcaccgtggcctcctggtatgaacagggcattcttgaaaac
atccagaggaataagctgctcttcattgagacgcaggatggggctgagaccagtgtcgcc
ctggagaagtaccaggaggcctgtgagaatggccgtggagccatcctgctgtcagtagcc
cggggaaaagtgtctgagggaatcgacttcgtgcaccactacgggcgcgcggtcatcatg
ttcggtgtcccctatgtctacacccagagccgcattctcaaggcgcggctggagtacctg
cgggaccagttccagatccgcgagaacgactttctcaccttcgatgccatgcgccacgcg
gcccagtgcgtgggtcgggccatccgcggcaagacagattacggcctcatggtctttgcc
gacaagcggtttgcccgggctgacaagcgcgggaagctgccccgctggatccaggagcac
ctcacagacgccaacctcaacctgaccgtggatgagggcgtccaggtcgccaagtacttc
ctgaggcagatggctcagccgttccaccgggaagaccagctgggcctgtccctgctgagc
ctggagcagctggaatcagaggagacgctgcggaggatagagcagatcgcgcagcagctg
tag
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integrated database retrieval system
