KEGG   Neogale vison (American mink): 122912027
Entry
122912027         CDS       T08764                                 
Symbol
MDC1
Name
(RefSeq) mediator of DNA damage checkpoint protein 1 isoform X1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
nvs  Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:nvs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nvs03400]
    122912027 (MDC1)
DNA repair and recombination proteins [BR:nvs03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    122912027 (MDC1)
SSDB
Motif
Pfam: BRCT_2 FHA RTT107_BRCT_5 BRCT Yop-YscD_cpl
Other DBs
NCBI-GeneID: 122912027
NCBI-ProteinID: XP_044113230
LinkDB
Position
1:122831437..122846061
AA seq 1992 aa
MEDTQAINWDVEEEEETERRSESLGCSLEPVGRLHIFSSAHGPEKDFPLYLGKNMVGRMP
DCSVTLPFSSISKQHAVIEILAWDKAPVLQDCGSLNGTQVLRPPKVLSPGVSHRLRDQEL
ILFADLPCQYHRLNVPLPFVSRGPLTVEETPRVQGGTQPQRLLLAEDSEEEVDSPSERCV
MKGPRTSPLAAVVPESDEEGPSPAPDGPGPPFAFNLDSDTDEEESQHPASGEAFLAARRG
STAETEQPTAVATEIQLEKDQCSVKERNNGTEVEREARNGVVPLGATLARNQTAEEDSDT
DMDESRPAEVHWERAQPSGFTDSDTDVEEEGIPATPAVVPMKKRQILHEISTKIPQAPAL
VHLQESPANSDTDVEESEFQLAVPPERNQASLVIDSNTDDEEEVLAALTLAHLKESQADT
WNRGTDVEESRAQPVALLEQNQTSAGRVSAPRDSEEEGLPIEKKAIVPKCDIDKAYSEKR
QSPLRDCDLGVDEDKSSLGAHLQRSQASATVDINTQVEEKALSGPAVTLVEKHQVPMVWT
NQTNVEVEGGQAKLPVMHLEKTQPLPPGDCETDAEEGTSLATSVVADTGKCQLPAEGDAG
MEWAAAVLEQERALEARAQGESLVSQVEQDLLPVSRENLIDLVVDTGTSGEPIQPQRGGA
QTPTERERELHVDRTKDSRDNHCDSEDLDLQATQCFVERENQSPEAVQSMEDEATQAFLV
TLPQDPGPSCCSFQAPGALDEPWEVLATQPFCPRESEASEPHPIAAHLDAHGSCPSTPRT
TPQAQHPEIPVHEEALGTQGRGMQTVENDMGTPREEAEGVTSERGLLNRETKNLPAEERE
DVIGEEELTRGKQMLARDNQGQESDQKVKSASIERNMENLNIEIEIPREVQEEEIGKQTL
AREVFEREAEKLVLEREDEPSGLGIEVPEEKLESSPQRGETEKGSQDQEGQASHLTPEPG
AGTGDHQGLTSTPGASGNQSDRAPMSPRRQQRGHWTCKMPPAEKASAGDQESADACLPPA
VPEASALHHNSLLSQSQKHPVPQPFHSPSPSSLEPIPRTRQNGNQEVPETTLSSDMEPLH
SKSKVRLRGSSRKTPSAVSSLALEPHSTIRTDQPLSPELTSRVTRGRTRRSSVMTPELVV
PTAPELQTSTSKDQPVIPESTLQVTRGRTHRFSVKIPELVVPIVPAVQPSTSKEQPAATE
LISQSRTHKSVKTPEPVVSTATPGRAHRSSDKTPKTVIPTAPELQPSISKDQPVTPERTS
RVTWGRTRRSSIKTPEPTVPTVPEVQPSTSKDQPVITEPTSGAPHRRTHRSSGKTPEPHV
PTAPKVQPSISKDQPVTPEPTSKVTWGRTRRSSVKTPKPTVPTAPEVQPSTSKDQPVITE
PTSGAPHRRTHRSSGKTPEPVIPIAPEVQPSIPTDQPVIPKPTSQGRTPRSSIKTPEPIV
PTAPEPQLTTPGGQPVTPKRTSRGRTPRSSKTPKSIVSTVPELQASTPTDQPVTPKLLSL
ATRGRTQRSSIKNSEPVAPTTPELQPSLSTDQPVTSEPTSRATRGRTHRSFVKIPQPTEL
RAPDLESLTPTDQLVTPKAQGCQGKTLRSSGISAGPVFTTPEFQSPVPTDQPLPPEPISQ
ANCSRKLRATRKYGSLTAPIVCEPYSALPEPKSRSSRNQRQGPVRVVESLRTTPKPALAQ
LPEAPTHATQIQKVEGAGRSEFTPEPLPKASQSCKRPLATVDSPPLQKRLQRGEVTQKTV
FLKEEEEDPMERPRKEEDVVAPGPGKRKRDQAEEEPKGLPSRSLRRTKPNQESTAPKVLF
TGVVDARGERAVLALGGSLASSVAEASHLVTDRVRRTVKFLCALGRGIPILSLDWLHQSR
KAGCFLPPDEYVVTDPEQEKNFGFSLRDALSRARERRLLEGYEIHVTPGVQPPPPQMGEI
ISCCGGTVLPSMPRSYKPQRVVITCSQDFPRCSVPFRVGLPILSPEFLLTGVLKQEAKPE
AFILSALEMSSS
NT seq 5979 nt   +upstreamnt  +downstreamnt
atggaggacacccaggctattaactgggatgttgaagaagaggaggagacagagagacgc
agtgaatccttagggtgtagcttggagcccgtagggcgattgcatatcttcagtagtgcc
catggaccagaaaaagatttccccctgtatctcgggaagaatatggtgggccgaatgcct
gattgctctgtgaccctacccttttcatccatctccaaacaacatgcagtgattgaaatt
ttggcctgggacaaagcgcctgtcctccaagattgtggcagtctcaatggtactcaagtc
ctaaggcctcctaaggtcctaagcccaggggtgagtcaccggctgagggaccaggagttg
attctctttgctgacttgccctgccagtaccatcgcctgaatgtccctctgccctttgtt
tcccggggccctctaactgtagaagagacacccagggtgcagggaggaactcaaccccag
aggctcttgttggctgaggactcagaggaggaagtagattctccttctgaaaggtgtgtg
atgaaaggaccaaggacctcccctttggcagcagtagttccagagagtgatgaagaagga
ccttctcctgccccagatggccctgggccaccatttgccttcaacctggacagtgacaca
gatgaggaagaaagtcagcatccagcatcaggagaggccttcttagctgccagaagaggc
tccactgcagagacagaacagcctacagctgtggcaactgaaatccagcttgaaaaggat
cagtgttcagtgaaggagaggaacaatggcacagaagttgagagggaggcaaggaatggg
gtggtcccacttggggccactctggcaagaaaccaaactgctgaggaggacagtgacaca
gatatggatgagagcaggcctgctgaggtccactgggaaagggctcagccttctggcttc
acagacagtgatactgatgtggaagaagaagggatccctgcaaccccagcagtagttcct
atgaagaagaggcaaatcctccacgaaattagtacaaagattcctcaggcacctgctttg
gtacatctgcaggagagcccagccaatagtgatacagatgtggaagaaagtgagtttcaa
ctggcagtccctccggagagaaaccaagcctccttggtgattgacagcaatacagatgat
gaggaagaagtcttagcagcactcactttggcacatctgaaagagagccaagccgataca
tggaacagaggtactgatgtggaagagagcagggcccaacctgtggctcttctggagcaa
aaccaaacctccgctgggagagtctctgctccgagagactcggaggaggaggggctccca
atcgaaaagaaagcaattgttcccaagtgtgatatagacaaggcatattcagaaaaaagg
cagtctcctctccgagactgtgatctaggggtggacgaagataagagctcacttggggcc
catctgcagagaagccaagcctctgccacagtggacatcaacacacaagtggaggagaaa
gccctatcaggaccagccgttacacttgtggagaagcatcaggtgcctatggtatggaca
aatcaaacaaatgtggaagtagaagggggccaagcaaagctgcctgtgatgcatctagag
aaaacccagcctcttccccctggggactgtgagacagatgcagaagagggcacatcctta
gcaacctcagtggtggcagatacaggaaagtgccagcttccagcagaaggggatgctggg
atggaatgggctgcagctgttcttgagcaggagagagctcttgaggcaagggcccagggt
gaatcccttgtgtcacaggtggagcaggatcttctccctgtttcaagggagaaccttata
gatcttgtggtggacacaggcacttcaggggaacccatccagccgcagagagggggagcc
caaacccccacagaaagggagagggaattacatgtggacaggaccaaggactccagggac
aaccattgtgattctgaagacctggacctacaggctacccagtgctttgtggagagagag
aatcagagcccagaagcagtccagagcatggaggatgaagctacccaggccttcctggtt
actctaccccaagaccctggcccttcctgttgcagtttccaggccccaggtgccctggat
gagccatgggaagtcttggcaacacagccattctgtccgagagagtctgaggcctctgag
ccccatcccattgctgcccatcttgatgcccatggatcttgcccctctacacccaggaca
acaccacaggcccaacatccagagatcccagttcatgaagaggcactggggactcaaggc
agagggatgcagactgtggagaacgacatgggtacaccaagggaagaagcagagggggtg
acctctgagagaggactgttgaacagggaaaccaagaacctgccagcagaagagagagaa
gatgttataggagaagaagaattaaccagagggaaacagatgttagctagagataatcag
ggacaagagtctgaccaaaaggtaaaaagtgcaagtattgaaaggaatatggagaattta
aacatagaaattgagatacccagggaagtacaagaggaagagataggaaagcagactctt
gcaagagaagtatttgagagagaagcagagaaactagtactagagagagaagatgagcca
agtggattaggcattgaggtaccagaagaaaaactggagagcagcccgcagagaggggaa
acagagaaagggagccaggaccaggaagggcaggcctcccatctaacaccagagcctgga
gcagggacgggagaccatcagggactcacttcaaccccaggagcttctgggaaccagtca
gatagagccccgatgagccccaggaggcagcagagaggccactggacttgcaagatgcca
cctgctgagaaggcctctgcgggtgatcaggaatctgcagatgcttgtctgcctcctgca
gtgcctgaagcctcagccctccaccacaactccctcctctctcagagtcaaaaacatcct
gtgccccagcccttccattctccctctccatcttctttagagcccattcccagaaccaga
caaaatgggaatcaggaagttccagagactaccttgtcctcagacatggagcctctccac
tcaaaatccaaagtcaggctccgagggtcctcccggaagacaccctctgcagtttcttct
ttagcccttgaaccacactctaccatccgcacagaccagcccctcagtcctgagctcaca
tctcgggtcactcggggcaggacacgtaggtcctctgtcatgacccctgaactagttgtc
cccacagcccctgagctccagacttccacctccaaagaccagcctgtcatccctgagtca
acattgcaggtcactcggggtagaacacataggttttctgtcaagatccctgaacttgtt
gttcctatagtccctgcagtccagccttccacctccaaggagcagcctgccgctactgag
ctcatatctcagagcagaacccataaatctgtcaagacccctgaaccagttgtctccaca
gccactccgggcagggcgcataggtcttctgacaagactcccaaaacagttatccccaca
gcccctgagctccagccttctatttccaaagaccagcctgtcacccctgagcgcacatct
agggtcacttggggccgtacacgtaggtcctctatcaagactcctgaaccaactgtcccc
acagtccctgaagtccagccttccacctccaaagaccagcctgtcatcactgagcccaca
tctggggcccctcacagaaggacacataggtcttctggtaagacccctgagccacatgta
ccaacagctcctaaagtccagccttctatttccaaagaccagcctgtcacccctgagccc
acatctaaggtcacttggggcaggacacgtagatcctctgtcaagactcctaaaccaact
gtccccacagcccctgaagtccagccttccacctccaaagaccagcctgtcatcactgag
cccacatctggggcccctcacagaaggacacataggtcttctggcaagacccctgagcca
gttatcccaatagctcctgaagtccagccttccatccccacagaccagcctgtcatcccc
aaacccacatctcagggcaggacacccaggtcttctatcaagacccctgagccaattgtc
ccgacagcccctgaaccccagcttaccacccctggaggccagcctgtcacccccaaacgt
acatctcggggcaggacacctagatctagcaagacccctaaatcaattgtctctacagtc
cctgagctccaggcttccacccccacagaccagcctgtcacccctaaactcctatctctg
gccactcggggcaggacacaaaggtcctctatcaagaactctgagccagttgcccccacg
acccctgaactccagccttccctctccacagatcagcctgtcacttctgagcccacatct
cgggccactcggggcaggacacataggtcctttgtcaagatcccccaaccaactgagctc
agagcccctgaccttgaatctctcacccccacagatcagctggtcacccctaaggctcag
ggttgtcagggtaagacactcaggtcttctggaataagtgctgggccagtttttaccacc
cctgaattccagtctcctgtccccacagaccagcctcttccccctgagcccatctctcaa
gccaattgcagcaggaagctgagggccactaggaaatatgggtccctcacagctcccatt
gtctgtgagccgtattctgcacttcctgaacctaagtctcggtcctcaaggaaccagaga
caagggccagtgagagtagttgaatccctcaggaccacacccaagcctgccttagcccag
cttcctgaggcccccactcatgctacccagatccaaaaggtagagggagcaggcagatca
gagttcaccccagagcccctgcctaaagcctctcagagctgcaagaggcctttggctact
gtagattcacccccacttcaaaaacggctccaaagaggggaagtcacccagaagacagtg
ttcctcaaggaagaggaagaagatccaatggagaggccaaggaaggaggaggatgtagtg
gctccaggaccaggcaagagaaagagggaccaagcagaggaggagcccaagggactacca
agccgcagccttcgacgcaccaaacctaaccaagagtccacagcccccaaagtacttttc
acaggagtggtggatgcccgtggagagcgggcagtgctggccctggggggtagtctggcc
agctcagtggcagaggcttcccacctagtgactgatcgagtccgacgcacagtcaagttc
ctctgtgccctggggcgggggatccccatcctctccttggactggctgcaccagtcccgc
aaagctggttgcttcttgcccccggatgaatatgtggtgactgatcctgagcaggagaag
aacttcggcttcagccttcgagatgccctgagccgggctcgggaacgaaggttgctggag
ggctatgagatccacgtgaccccaggagtccagcccccaccacctcagatgggagagatc
atcagctgctgtggaggcactgtactacccagcatgccccggtcctataagcctcagaga
gttgtgattacatgctcccaggacttccctcgatgctctgttccatttcgggttgggctg
cccatcctctcacctgagttcctgctgacaggagtgctgaagcaggaagccaagccagag
gccttcatcctctccgctttggaaatgtcatcctcctga

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