Neogale vison (American mink): 122912090
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Entry
122912090 CDS
T08764
Symbol
DHX16
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 isoform X1
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122912090 (DHX16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nvs03041
]
122912090 (DHX16)
Enzymes [BR:
nvs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
122912090 (DHX16)
Spliceosome [BR:
nvs03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
122912090 (DHX16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
WHD_HA2
AAA_22
AAA_19
AAA_30
SecA_DEAD
Flavi_DEAD
nSTAND3
Cas3-like_C_2
SRP54
Motif
Other DBs
NCBI-GeneID:
122912090
NCBI-ProteinID:
XP_044113366
LinkDB
All DBs
Position
1:122865048..122881256
Genome browser
AA seq
1043 aa
AA seq
DB search
MATPAGLERWVQDELHSVLGLSERHVAQFLIGTAQRCASAEEFVQRLRDTDTLDLSGPAR
DFALRLWNKVPRKAVVEKPARVAEREARALLEKNRSYKLLEDSEESSEETVGRAGSSLQK
KRKKRKHLRKKCLEEEEEEEKISEKGKQKAGGSKQQTEKPESEDEWERTERERLQDLEER
DAFAERVRQRDKDRTRNVLERSDKKAYEEAQKRLKMAEEDRKAMVPELRKKSRREYLAKR
EREKLEDLEAELADEEFLFGDVELSRHEQRELKYKRRVRDLAREYRAAGEQEKLEATNRY
HMPEETRGQPARAVDLVEEESGAPGEEQRRWEEARLGAASLKFGARDAASQEPKYQLVLE
EEETIEFVRASQLQGDEEPSGPPPPTQAQQKESIQAVRRSLPVFPFREELLAAIANHQVL
IIEGETGSGKTTQIPQYLFEEGYTRKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVG
YSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKD
VARFRPELKVLVASATLDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVS
VLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDIQAR
IFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKAS
ANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHF
DFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSE
EILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQWC
YENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLTRSG
YRTVKQQQTVFIHPNSSLFDEQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKA
KELEDPHSKKMPKKIGKTREELG
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgccggctgggctggaacgctgggtgcaggacgagctgcactcggtgctgggg
ctgagcgagcggcatgtagcgcagttcctaattggtaccgcccagcgctgcgcctcggcc
gaggagtttgtgcagcgtctgcgagacaccgataccctggacctcagcggaccagcccgg
gacttcgccctgaggctctggaacaaggtaccacggaaggcagtggtagagaagccagct
cgggtggctgagcgagaggcccgagccctgctggagaagaaccgatcctataaattgctg
gaagacagtgaggagagcagtgaggagactgtaggtagagccgggagcagtctccagaag
aagcgtaaaaaacggaaacacctcaggaagaaatgtcttgaggaggaagaagaggaggaa
aagatttctgagaaagggaagcaaaaggcagggggcagtaaacagcagactgagaagcca
gagtcggaggatgagtgggagcggactgagcgagagcgccttcaggacttggaggaacgt
gatgccttcgccgagcgggttcggcagcgggacaaggatcgaactcgcaatgtcctggag
cggtcagacaagaaggcatatgaagaggctcagaagcgcctcaagatggctgaggaagac
cggaaagctatggtccctgagctacggaagaaatcccgccgagagtacttggctaagcgg
gagcgagagaagcttgaggacctggaggctgagctggctgatgaggagttcctttttggg
gatgtggagctgagccgacatgaacagcgggagctcaaatacaagcggcgagttcgggat
ctggcccgagagtaccgggcggctggggagcaggagaagctggaggccaccaatcgttac
cacatgccagaggagacccgaggccagccagcacgagctgtggatctagtggaggaggaa
tcaggcgcccctggagaggagcagcgacgctgggaggaggcccggctgggggcagcatcc
ctgaagtttggagcccgagatgctgcctcccaggagcccaagtatcagctggtgctggag
gaagaggagaccatcgagtttgtccgggcctctcagctccagggcgatgaggagccatcg
ggcccaccgcccccaacccaggcccagcagaaggagtccatccaggctgtccgccgcagc
ctcccagtgttccctttccgtgaggagctcctggctgctattgctaatcatcaggtcctc
atcatcgagggtgagacgggctccgggaagaccacccagattccacagtatctctttgag
gagggttatacaaggaagggaatgaagattgcctgcacccagccccggagagtggcagcc
atgagtgtggctgcccgtgtggcccgggagatgggtgtgaagcttgggaatgaggttggc
tacagcatccgctttgaggactgcacatcagagcgaactgtcctccgctacatgacagat
gggatgctcctcagggagttcctctctgaacctgaccttgcaagttacagtgtggtgatg
gtagatgaggctcatgaacggaccctacacacagacattctctttgggttaatcaaagat
gttgctcgcttccggcctgagctgaaggtcttggtggcttcagccactctggacactgcc
cgtttctccaccttctttgatgatgcccctgtcttccgaatccctggacgcaggtttcca
gttgacatcttctataccaaggctccagaggctgactacctggaggcttgtgtagtgtct
gtgctgcagatccatgtgacccagccccctggggatatcctggtgttcctgacaggacag
gaggagattgaggccgcctgtgagatgctccaggatcgctgccgccgcctgggctccaaa
atccgggagctcttggtgttacccatttatgccaacctgccttctgacatacaggctcgt
atcttccagcccacaccccctggggcacgaaaggtggttgtggcaacaaacatcgctgag
acatcactcaccattgaaggcatcatttacgtactggatccagggttctgtaagcagaag
agctacaaccctcgcacaggcatggaatccctcactgtcacaccctgcagcaaggcctca
gccaatcaacgggctggtcgggcaggtcgggtggctgctgggaagtgcttccgcctgtat
actgcctgggcctatcagcatgagctggaggaaaccacggtgccggagatccagaggacc
agcctgggcaatgtcgtgttgctgctcaagagcttagggatccatgatctaatgcacttt
gatttcctggatcctccaccatatgagacccttctgctggctttggagcagctgtatgct
ctgggagccctcaaccaccttggggagctcaccacgtctggtcggaagatggcagagcta
ccggtggaccccatgctatctaaaatgatcctggcctctgagaagtacagctgttcagaa
gagatcctgacggtggctgccatgctgtctgtcaacaactccatcttctaccgacccaaa
gacaaggttgtgcatgctgacaatgcccgtgtcaactttttcctccctggtggagaccac
ctggttctgctgaacgtttatacgcagtgggctgagagtggttactcttcccagtggtgc
tatgagaactttgtgcagttcagatcaatgcgccgagcccgggatgtgagggaacagctg
gaggggctcttggaacgtgtggaagttggtctcagctcttgccagggggactatatccgt
gtacgcaaggccatcacagctggttacttttaccacacggcccggttgactcgtagtggc
tatcgcacagtcaaacagcagcagacagtgttcatccaccccaactcctccctgtttgat
gaacagccacgttggctgctctaccatgaacttgtcttgaccaccaaggagttcatgaga
caggtactggaaattgagagcagttggcttctggaggtggctcctcactattataaagcc
aaggaactagaagatccccattctaagaaaatgccaaaaaaaataggcaagacacgagaa
gagctagggtaa
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integrated database retrieval system
