Neogale vison (American mink): 122912189
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Entry
122912189 CDS
T08764
Symbol
CIC
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
nvs
Neogale vison (American mink)
Pathway
nvs05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
122912189 (CIC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nvs03000
]
122912189 (CIC)
Transcription factors [BR:
nvs03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
122912189 (CIC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
122912189
NCBI-ProteinID:
XP_044113570
LinkDB
All DBs
Position
7:60924301..60935813
Genome browser
AA seq
1612 aa
AA seq
DB search
MYSAHRPLVPASGAASRGLGMFVWTNVEPRSVAVFPWHSLVPFLAPSQPDPSVQPSEAQQ
PASHSVASTQSKEPAESAAVAHEQPPGGTGSADPGRPPGATCPESPGPGPPHTLGVVEPG
KGPPPTTEEEAPGPPGEPRLDSETESDHDDAFLSIMSPEIQLPLPPGKRRTQSLSALPKE
RDSSSEKDGRSPNKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYA
LGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSEAKPASLGLAGGHKETRERSM
SETGTAAAPGVSSELLSVAAQTLLSSDTKAPGSGSCGTERLHTVGGPGSSRPRAFSHSGV
HSLDGGEVDSQALQELTQMVSGPASYSGPKPSTQYGAPGPFSASSEGGALAAGGRPPLLP
TRASRSQRAASEDMTSDEERMVICEEEGDDDVIADDGFGATDIDLKCKERVTDSESGDSS
GEDPEGSKGFGRKVFSPVIRSSFTHCRPPLDPEPPGPPDPSPPAFGKGYGPTPSSSSSSP
ASSSASAATSFPLGSGTFKAQESGQGSTAGPLRPPPPGAGGPGTPSKATRFLPSDPAAFR
RKRPESVGGLEPPGPSVIAAPPGGGGSVLQTLVLPPNKEEREGSGTRMPSAPAPSLAYGA
PTAPLSRPAATMVTNVVRPVSSTPVPIASKPFPTSGRAEASPNDTVGARTEPVTGSRAPG
SSPLGVSLVYSDKKSAAASSPAPHLVAGPLLGAVGKASATVTNLLVGTPGYGAPAPPAVQ
FIAQGAPGSGATTGSGAGAGSGPNGPVPLGILQPGTLGKAGGITQVQYILPTLPQQLQVA
PAPAPAPGTKAAAPGGPAPTTSIRFTLPPGTSTNGKVLAATAPTPGIPILQSVPSAPPPK
AQSVSPVQAPPPGGSAQLLPGKVLVPLAAPSMSVRGGGAGQPLPLVSPPFSVPLQNGAQP
PSKIIQLTPVPVSTPSGLVPPLSPATLSGPTSQPQKVLLPSSTRITYVQSAGGHALPLGT
SPTSSQAGTVTSYGPTSSVALGFTSLGPSGPAFVQPLLSGQAPLLAPGQVGVSPVPSPQL
PPACTAPGGPIITAFYPGSPAPTSSAPLAQPSQAPPGLVYTVATSTPPAATILPKGPPAP
ATATPAPTSPFPNASAGSMTYSLVAPKAQRPTPKAPQKVKAAIASIPVGSFEAGAPGRSG
PAARQPLEPGPSRDPPPPESELEGQPTTPAPPPPPETWAPMARSSPPPPLPAEERTSSKG
PETVASKFPSSSSSDWRVPGLGLETRGEPPTPPSPAPAPASAPGGSGSSSSEGSSGRAAG
DTPERKEAAGTGKKVKVRPPPLKKTFDSVDNRVLSEVDFEERFAELPEFRPEEVLPSPTL
QSLATSPRAILGSYRKKRKNSTDLDSAPEDPTSPKRKMRRRSSCSSEPNTPKSAKCEGDI
FTFDRTGTEAEDVLGELEYEKVPYSSLRRTLDQRRALVMQLFQDHGFFPSAQATAAFQAR
YADIFPSKVCLQLKIREVRQKIMQAATPTEQPPGAEAPLPGPPPTGTAAAPVPTPSPAGG
PDPTSPGSDSGTAPAAPPLPPPPEPGPGQPGWEGPPQPSPPPPGPSTAATGR
NT seq
4839 nt
NT seq
+upstream
nt +downstream
nt
atgtactcagcccacaggcccctggtgcccgcgtccggcgcggcctcccgtggcctcggc
atgttcgtgtggacaaatgtggaacctcgctctgttgccgtgttcccctggcactcctta
gtcccttttctggcccccagccagcccgacccctctgtgcagccaagtgaggcccagcaa
cctgccagccactcagtggcctccacccagagcaaagaacctgctgagtcggcggctgtg
gctcatgagcagccaccaggtgggacagggagtgctgaccctgggcggccccctggagcc
acctgccctgagagcccagggcccggacccccccacactttgggggtggtggaacctgga
aagggtccccctcccaccactgaggaggaggcccctggccctccaggagagccccggctg
gacagcgagacggagagtgaccatgatgatgccttcctctccatcatgtctcccgagatc
cagttgcctctgccacccgggaaacgccggacccagtccctcagtgccctgccaaaggaa
cgagactcctcttcggagaaggatggacgcagccccaacaagcgggagaaggaccatatt
cggcggcccatgaacgccttcatgatcttcagcaagcggcaccgggccctggtccaccag
cgtcaccccaaccaggacaaccggaccgtcagcaagattctgggcgagtggtggtacgcc
ctggggcccaaggagaagcagaagtaccatgacctggccttccaggtgaaagaggcccac
ttcaaggctcacccagactggaagtggtgcaataaggaccggaagaagtccagctcagag
gccaagcctgcgagcctggggctagcaggaggacacaaggagactcgggagcggagcatg
tcggagacggggactgccgctgcccctggagtgtcctcggagctcctctccgtcgcagcc
cagacgctcctgagctcggataccaaggctccagggagtggttcctgtgggacagagcgt
ctgcacacagttgggggacctggctcgtcccggccccgagccttctcccacagtggggtc
cacagcctggatggtggggaagtagatagccaggcgctacaggaactgactcagatggtg
tccggccccgcatcctattctggtccaaagccttccacccagtatggggctccaggcccc
ttctcagcctctagtgagggaggtgccctggcggctggtgggcgacccccgctgctgccc
acccgggcctcccgttcccagcgtgcagccagtgaggacatgaccagtgacgaggaacgc
atggtcatctgtgaggaggagggagacgatgatgtcattgctgatgatggcttcggtgcc
actgacattgaccttaagtgcaaggagcgggtgactgatagcgagagcggagacagctct
ggggaggacccagagggcagcaagggttttggccggaaggtgttctcgcctgtgattcgt
tcctcctttacccactgccgcccaccgttggaccctgagcccccagggcccccggatcca
tcacctccagcctttggcaaaggctacgggcccaccccttcttcatcctcgtcctcacct
gcctcctcctcagcctcagccgccacctccttcccactgggctcagggaccttcaaggcc
caggagtcaggtcagggcagcacggcaggcccactacgacccccacctcctggggctggg
ggcccagggacaccttccaaggccacccggttcctcccatcggatcctgccgccttccgg
cgcaagagacctgaaagtgtgggaggcctggagccaccaggcccctcagtcattgcagca
cctcctggcgggggaggaagtgtcctgcagacgctggtcctgcccccaaataaggaggaa
cgggaaggcagcggaacccgcatgccctcagccccagccccgtcactggcctatggggcc
ccaacagcccccctgtcccgcccagctgctaccatggtcaccaatgtggtgcggcctgtc
agtagcactcctgtgcccatcgcctctaagcccttccctacctctggccgggctgaggca
tctccaaatgacactgtgggtgccaggactgagccggtcacggggtcccgggcgccaggg
agctccccgctgggtgtaagcttagtgtactcggacaagaagtcggcagcagcctcctcg
ccggccccgcacctggtggctgggcccctcctaggtgctgtgggaaaggcctctgccaca
gtcaccaacctgctggtgggcacaccgggttatggtgccccagcgccccctgctgttcag
ttcatagcccagggggcccctggcagtggagccaccacaggctctggagcaggcgctggg
agtggccccaatgggccagtgcccctgggcatcttgcagccgggcaccttgggcaaggct
gggggaatcacccaggtgcagtacatcctgcccacgctgccccagcagcttcaggtggcg
cctgccccggcaccagcccctgggaccaaggcagcagctcctggcggccccgcaccaacc
accagcatccgtttcaccctccccccgggcacctccaccaacggcaaagttctggcggcc
accgcacccacccctggcatccccatcctgcagtccgtaccctctgccccgccccccaaa
gcccagtcagtgtctcctgtacaggctccgcccccgggtggctcagctcagctgctgccc
gggaaggtactggtgcccctggcggcccctagcatgtccgtgcggggtggaggggctggc
cagccactgcccctggtgagcccgcctttctcagtacctttgcagaatggggcccagcca
cccagcaagatcatccagctgactccggtgcctgtgagcacacccagtggcctggtgccg
cccctcagcccagccacactctccggacccacctcccagcctcagaaggtcctgctgccc
tcctctaccagaatcacctatgtgcagtcggcgggtgggcacgccttgcccctgggcacc
agccctacgtccagccaggctggaacagtcacctcgtatgggcccacgagctcggtagcc
ctaggcttcacctcgctggggcccagcggacccgcctttgtgcagcccctgctttcaggc
caagctccattgctggctcctggccaggtgggcgtgtcgccagtgcccagcccccagctg
ccgccagcctgcacagcccccggaggtcccatcatcactgcattttaccctggcagccct
gcacccacctcctctgcacccctagcccagccatcccaggctcccccaggtctggtctac
accgtggccactagcaccccacctgctgccaccatcctgccgaagggcccaccagcccct
gccactgccaccccggcccctaccagccctttccctaatgcttcagcaggctccatgacc
tacagcttagtggcccccaaggcccagaggcccacccccaaggccccccagaaagtgaag
gctgccattgccagcattcccgtgggttccttcgaggcaggtgcccctgggcggtcaggc
cctgcagctcggcagcccttggagcctggcccatcccgggacccccctccccctgagtct
gagcttgaggggcagcctacgacaccggcccctccaccacccccagagacctgggctccc
atggcccggagcagccccccgcctcccctgcctgctgaggagcggacaagcagcaagggc
cctgagactgtggccagcaaattccccagctcttcgtcttcagactggcgagtccctggg
ctgggtctggagacccgtggggagcctcccacccctcccagcccagcgccagctccggct
tcagcccctggtggcagcggcagcagcagcagcgagggcagcagtgggagggcagccggg
gacacccctgagcgcaaggaggccgctggtaccggcaagaaggtgaaggtgcggcccccg
cccctgaagaagacctttgactctgtggacaacagggtcctgtcagaggtggacttcgaa
gagcgctttgctgagctgcctgagttccggcctgaggaggtgctgccttcgcccaccctg
cagtctctggccacctcgccccgggccatcctgggctcctaccgcaagaagaggaagaac
tccactgacctggactcggcccccgaggaccctacctcgccgaaacgcaagatgaggaga
cgctccagctgcagctcagagcccaacacccccaagagtgccaagtgcgagggggacatc
ttcaccttcgaccgtacaggtacggaagcggaggatgtgctcggggagctggaatacgag
aaggtgccatactcttccctgcggcgtaccctggaccagcgccgggccctggtcatgcag
ctcttccaggaccatggcttcttcccatcagcccaggccacggcagcttttcaggcccgc
tacgcagacatcttcccctccaaggtgtgtctgcagttgaagatccgtgaggtgcgccag
aagatcatgcaggcggccactcccacggagcagccccctggagctgaagccccccttcct
ggaccgccccccactggcactgctgctgcccctgtccccactcccagccctgctgggggc
cctgaccccacctcacctggctcggactctggcacagctccagctgccccgccactgcct
ccacctccagagccgggtcccggacagcctggctgggagggccccccccagccgtccccc
ccgccccctggcccctccacagctgccacaggcaggtga
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