KEGG   Neogale vison (American mink): 122912289
Entry
122912289         CDS       T08764                                 
Name
(RefSeq) histone deacetylase 1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
nvs  Neogale vison (American mink)
Pathway
nvs03082  ATP-dependent chromatin remodeling
nvs03083  Polycomb repressive complex
nvs04110  Cell cycle
nvs04213  Longevity regulating pathway - multiple species
nvs04330  Notch signaling pathway
nvs04350  TGF-beta signaling pathway
nvs04613  Neutrophil extracellular trap formation
nvs04919  Thyroid hormone signaling pathway
nvs05016  Huntington disease
nvs05031  Amphetamine addiction
nvs05034  Alcoholism
nvs05165  Human papillomavirus infection
nvs05169  Epstein-Barr virus infection
nvs05200  Pathways in cancer
nvs05202  Transcriptional misregulation in cancer
nvs05203  Viral carcinogenesis
nvs05206  MicroRNAs in cancer
nvs05220  Chronic myeloid leukemia
Brite
KEGG Orthology (KO) [BR:nvs00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    122912289
   03083 Polycomb repressive complex
    122912289
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    122912289
   04350 TGF-beta signaling pathway
    122912289
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    122912289
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    122912289
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    122912289
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    122912289
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    122912289
   05202 Transcriptional misregulation in cancer
    122912289
   05206 MicroRNAs in cancer
    122912289
   05203 Viral carcinogenesis
    122912289
  09162 Cancer: specific types
   05220 Chronic myeloid leukemia
    122912289
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    122912289
   05165 Human papillomavirus infection
    122912289
  09164 Neurodegenerative disease
   05016 Huntington disease
    122912289
  09165 Substance dependence
   05031 Amphetamine addiction
    122912289
   05034 Alcoholism
    122912289
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:nvs03036]
    122912289
Enzymes [BR:nvs01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     122912289
Chromosome and associated proteins [BR:nvs03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     122912289
   HDAC complexes
    Sin3A-HDAC complex
     122912289
    BRAF-HDAC complex
     122912289
    REST complex
     122912289
    SHIP complex
     122912289
    MiDAC complex
     122912289
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     122912289
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    122912289
  Chromatin remodeling factors
   NuRD complex
    122912289
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 122912289
NCBI-ProteinID: XP_044113791
LinkDB
Position
7:complement(103526723..103528848)
AA seq 482 aa
MAQTQGTRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAN
AEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAS
AVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPVISKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGG
GGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLE
KIKQRLFENLRMLPHAPGVQMQVIPEDAIPEESGDEDEEDPDKRISICSSDKRIACEEEF
SDSDEEGEGGRKNSSNFKKAKRVKTEDEKEKDPEEKKEVIEEEKTKEEKQEAKGVKEEVK
LA
NT seq 1449 nt   +upstreamnt  +downstreamnt
atggcgcagactcagggcaccaggaggaaagtctgttactactacgacggagatgttgga
aactactattacggacaaggccatccaatgaagcctcaccgaatccgtatgactcacaat
ttgctacttaactatggtctctaccgaaaaatggaaatctatcgccctcacaaagccaat
gctgaggagatgaccaagtaccacagtgacgactacattaaattcttgcgctccatccgc
ccagataacatgtctgagtacagcaagcagatgcagagattcaacgtcggtgaggactgt
ccggtattcgatggcctgtttgagttctgtcagttatctactggtggctctgtggcgagt
gctgtgaaacttaataagcaacagacggacatcgctgtgaattgggccgggggcctgcac
cacgcaaagaagtctgaggcatctggcttctgttacgtcaatgatatcgtcttggccatc
ctggaactgctaaagtatcaccagagggtgctgtatattgacattgatattcaccacggc
gatggcgtggaagaggccttctataccacagaccgggtcatgactgtgtcctttcataaa
tacggagagtacttcccaggaactggggacctacgggatattggggctggcaaaggcaag
tattatgctgttaactacccgctccgagatgggatcgatgacgagtcctatgaggccatt
ttcaagccggtcatatctaaagtgatggagatgttccagcccagtgcggttgtcttacag
tgtggttccgactccttgtctggggatcggttaggttgcttcaatctgaccatcaaaggg
cacgccaagtgtgtggagtttgtgaagagcttcaacctgcctatgctgatgctgggagga
ggcggctacaccatccgtaacgtggcccgctgctggacgtatgaaacagcagtggccctg
gacacggagatcccgaatgagcttccatacaacgactacttcgaatactttggaccagat
ttcaaacttcacatcagtccttccaatatgaccaaccagaataccaatgaatacctggag
aagatcaaacagcgactgtttgagaacctgagaatgctgccccatgcaccgggggtccaa
atgcaggtgattcctgaggacgccattcctgaggagagtggcgacgaggatgaagaagat
cctgacaagcgcatctcaatctgttcttctgacaaacgaattgcctgtgaggaagagttc
tccgactctgatgaggaaggagaaggcggtcgcaagaactcttccaacttcaaaaaagcc
aagagagtcaaaactgaggatgaaaaagagaaagacccagaagagaagaaagaagtcata
gaagaggagaaaaccaaggaggagaagcaagaagccaaaggggtcaaggaggaggtcaag
ttggcttga

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