Neogale vison (American mink): 122912623
Help
Entry
122912623 CDS
T08764
Symbol
XNDC1N
Name
(RefSeq) LOW QUALITY PROTEIN: putative short transient receptor potential channel 2-like protein
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nvs04040
]
122912623 (XNDC1N)
Ion channels [BR:
nvs04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122912623 (XNDC1N)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC1_N
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
YVC1_C
Motif
Other DBs
NCBI-GeneID:
122912623
NCBI-ProteinID:
XP_044114550
LinkDB
All DBs
Position
7:151085390..151124857
Genome browser
AA seq
1260 aa
AA seq
DB search
MAPVKISHVVSFSSQDPKYPVENLLNPDSPRGPWLSSPQDKSGQLKVELQLERAVPIGYI
DVGNCGSAFLQIDVGRSSWSLDRPFVTLLPATMLMSLADLKQGKNRSGVRMFKDDDFLAP
ASGESWDRLRLTCSQPFTRQQSFGLAFLRVCSSLDSLDDPVGGPSAPESSRLSQGSDAQE
SSPSPWLANPSIRRTFFPDPQTSTKEISELKNILKQLQPGALGRSARMVLSAARRFPPSM
ASRRTSPSEPGPSQPASTELRPEEQNSENHVGRTKRRKVQACRPLSSSNSRPKQRGMAKA
GQREYHRRQAQSSGIQDTALCPICAGSFSVEVLPQHAATCGEISPPQPASPSSSPSSSQS
LLSFPCVVLXPVPPVSRPQPTWTEIMNKKLRFPPPLLAAIQEGHLGLVQHLLELGVEASG
SGPGGPLRNVEEAEDRSWREALNLAIRLGHEAITDVLLANVKFDFRQIHEALLVAVDTNQ
PAAVRRLLARLEREKGPKVDTRSFSLAFFDSSIDGSRFAPGVTPLTLACQKDLYEIAQLL
MEQGHTIARPHPVSCACLECSNARRYDLLKFSLSRINTYRGMASRAHLSLASEDAMLAAF
QLSRELRCLARKEPEFKPEYIALESLSQDYGFELLGMCRNQSEVTAVLNDQDEDNETEPE
AEGLGQAFEEGIPNLARLRLAVNYNQKRFVAHPICQQVLSSIWCGNLAGWRGSTTIWKLF
VAFLIFLTMPFLCLGYWLAPKSRLGRLLKIPVLKFLLHSASYLWFLLFLLGESLAMETQL
STFRGRSQSVWETSLHMIWVTGFLWFECKEVWIEGLHSYLLDWWNFLDMVILSLYLAAFA
LRLLLAGLAHKHCRDAPNGAACHYFTTAERSEWHTEDPQFLAEVLFAVTSMLSFTRLAYI
LPAHESLGTLQISIGKMIDDMIRFMFILMIILTAFLCGLNNIYVPYQETERLGNFNETFQ
FLFWTMFGMEEHSVVDMPQFLVPEFVGRALYGIFTIVMVIVLLNMLIAMITNSFQKIEDD
ADVEWKFARSKLYLSYFREGLTLPVPFNILPSPKALFYLLRRIFHFICCCCSCHQTKKPD
YPPIPTFANPQVGSGPGEGEQGSYRLRVIKALVQRYIERAQREFEETQRKDLGNRLTELT
KTVSRLQSEVAGVQRTLPEGGTRRPPGGASLLSRYITQVRNSFQNLGPPIPETPGLTVPG
IEGTQVPSEPGLQDVGGARMPASGESDPSSPAHVLVHREQESEAEGDLPWEEDLGVKGGS
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atggctcctgtaaagattagccacgtggtatctttttcctctcaggatcccaagtatcct
gtggagaacttgctgaacccagatagtccgagaggaccttggctcagcagtcctcaggac
aagagtgggcaactgaaagtagaactccagctggagagggcagtgcccattggctacatt
gatgtgggtaactgtggctctgctttcctgcaaattgatgtgggccgttcttcctggtcc
ctggatagaccttttgtcaccctgctccctgcaaccatgctaatgtccttagccgactta
aagcaggggaaaaaccgctcaggcgtccgcatgtttaaagacgatgatttcctggcgcca
gcctcaggtgagtcatgggatcgacttcgcctgacctgctcccaacccttcacacgtcag
cagtcttttggcctggccttcctccgggtgtgttcctccctggactccttagatgaccct
gtgggaggtccctcggcccctgagagctctaggctgagccagggctctgatgctcaggag
tctagtcccagcccctggctggctaatccttccattcggaggacattcttcccagatccc
caaacgagcaccaaggaaatttcagagcttaagaatatcctaaagcagctgcagccaggg
gctttgggccgttcagcccgaatggtgctttcagctgcccggaggttccccccaagcatg
gcaagcaggagaaccagcccctcagaaccaggtcctagtcagccagccagcacagagctc
agaccagaggagcagaactcagagaatcatgtgggcaggacaaagagacggaaagtacaa
gcctgcaggcctttatccagctcgaactcacggcccaagcagcgggggatggcaaaagca
gggcagagagaataccaccgacgccaggcccaaagcagtgggatccaggatactgccctg
tgccccatttgtgcaggctccttcagtgttgaggttcttccccagcacgctgccacctgt
ggagagatctccccacctcagccagcctctccttcctcatcaccatcttcgtcgcagtcc
ctactaagtttcccctgtgtggtactcnnaccagttcctccagtctccaggccacagccc
acctggacagaaatcatgaacaagaagctgaggttcccacctccactcctggctgccatc
caggaggggcacctgggcctagtgcagcacttgctggagttgggggtcgaagcatcaggc
agcgggccaggtgggcccctgaggaacgtggaggaggctgaggaccgctcctggagggaa
gctctcaatctggccatccggctgggccacgaggccatcactgatgtgctgttggccaat
gtcaagtttgacttccggcagatccacgaggccctgctggtggcagtggacacaaaccag
ccggccgcggtgcggcgcctgctggcccggctggaacgggagaagggccccaaagtagac
actaggtccttctcactggccttctttgactcatcaatcgatggctcgcgctttgcccct
ggtgtcactcccctcaccctggcctgccagaaggacttgtatgagatcgcgcagctgctc
atggagcagggccataccattgcccggccccacccggtctcctgcgcctgccttgagtgc
agcaacgcccgccgctatgacttgctgaagttctccctgtcccgcatcaacacctaccgt
ggcatggccagcagggcccacctctcgctggccagtgaggacgccatgctggctgccttc
cagctcagccgggagctcagatgtcttgcacgcaaggaacccgagtttaagcccgagtac
attgccctggagtcgctgagccaggactatggctttgaactgctgggtatgtgccggaac
cagagcgaggtcactgcggtgcttaatgaccaggatgaggacaacgagactgaacccgag
gctgagggcctgggccaggcctttgaggaaggcatccccaacctggcgaggctgcgactg
gccgtcaactacaaccagaagcggtttgtagcacaccccatctgccagcaagtcctgtcc
tccatctggtgtgggaacctggctggctggcgtggaagcaccaccatctggaagctcttt
gtcgccttcctcatcttcctcaccatgcccttcctctgccttggctactggctggcgccc
aagtcccggctgggccgcctactgaagatcccagtgctgaagttcctgctgcattctgcc
tcctacctgtggttcctccttttcctgttgggcgagtccctggccatggagacacagctg
agtaccttccgtggccgcagccagagcgtctgggagacctccctacacatgatttgggtc
acaggtttcctgtggtttgaatgcaaggaggtgtggattgagggcctgcacagttacctc
ctggactggtggaactttctggacatggtcatcctgtctctgtacctggcagccttcgcg
ctgcgcctcctcctggccgggcttgcccacaagcactgccgggatgcccccaatggggct
gcctgccactattttaccacagctgagagaagtgagtggcacacggaggacccccagttc
ttggcggaggtgctgtttgctgtcaccagcatgctcagcttcacccgcctggcctacatt
ttgccggctcacgagtccctgggcactctgcagatttccattggcaagatgattgacgac
atgatccggttcatgttcatcctcatgatcatcctgacggcctttctttgtggtctcaac
aacatctatgtgccctatcaggagacagaacggctgggcaatttcaacgagacattccag
tttctgttctggaccatgttcggcatggaggagcacagcgtcgtcgacatgcctcagttt
ctggtgcctgaattcgtgggccgggccctctatggcatctttaccatcgtcatggtcatt
gtgctgctgaacatgctcattgccatgattaccaactccttccagaagattgaggatgac
gcggatgtggaatggaagtttgctcgctccaagctctacctgtcctacttccgagaaggc
ctgacgctacctgtgcccttcaacatcctgccctcccccaaggccctcttctaccttctc
aggagaattttccacttcatctgctgttgctgctcctgccatcaaaccaagaagccagac
tatccgccaatccccacctttgccaacccccaggtggggtcagggcctggggaaggagag
caaggatcctatcgcctccgagtcatcaaggccctggtacaacgctacatagagagagcc
cagcgggagtttgaggagacccagcggaaagacctgggcaacagactgacggagctgacc
aagactgtgtctcgcctgcaaagtgaggtggctggtgtgcagcggaccctgccagaggga
gggacacgccggccacctggaggtgccagcctcctcagtcgctacatcacccaagtgcgt
aacagtttccagaatctgggccctcccatccctgaaactccagggctcacagtgccaggg
attgaggggacccaggtaccttcagaacctggccttcaggatgttggaggggctaggatg
ccagcttctggagagtctgatccctcctccccagctcatgtgttagtgcaccgggagcag
gaatcagaggcagagggggacctgccctgggaggaagatttgggggtcaagggggggtcc
tga
DBGET
integrated database retrieval system
