Neogale vison (American mink): 122912743
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Entry
122912743 CDS
T08764
Symbol
COPB1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nvs04131
]
122912743 (COPB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nvs04147
]
122912743 (COPB1)
Membrane trafficking [BR:
nvs04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
122912743 (COPB1)
Exosome [BR:
nvs04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
122912743 (COPB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT
HEAT_2
Cnd1
HEAT_EZ
Arm
MMS19_N
AP4E_app_platf
Motif
Other DBs
NCBI-GeneID:
122912743
NCBI-ProteinID:
XP_044114820
LinkDB
All DBs
Position
7:complement(162139737..162181078)
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AA seq
953 aa
AA seq
DB search
MTAAENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKEHPAHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDNNEAAAADV
LEFVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEVR
RSLGEIPIVESEIKKEAGELKPEEEITVGPVQKLVTEMGTYATQSALSSSRPTKKEEERP
PLRGFLLDGDFFVAASLATTLTKIALRYVALVQEKKKQNSFVAEAMLLMATILHLGKSSL
PKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSLSHMLSAKLEEEKLSQKKESEK
RNVTVQPDDPISFMQLTAKNEMNCKEDQFQLSLLAAMGNTQRKEAADPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPATCTDAEF
RQMWAEFEWENKVTVNTNIIDLNDYLQHILKSTNMKCLTPEKALSGYCGFMAANLYARSI
FGEDALANVSIEKPIQQGPEAPVTGHIRIRAKSQGMALSLGDKINLSQKKTSI
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacggctgccgagaacgtgtgctatacgttaattaacgtgcccatggattcagaacca
ccatctgaaattagcttaaaaaatgatctagaaaaaggagatgtgaagtcaaagactgaa
gctttaaagaaagtaatcattatgattcttaatggtgaaaagcttcctggacttttgatg
accatcattcgttttgtgctacctcttcaggatcataccatcaaaaaattacttttggta
ttttgggaaattgttcctaaaacaactccagatgggagacttttacatgaaatgatcctt
gtatgtgatgcatacagaaaggatcttcagcatcctaatgaatttattcgaggatccact
cttcgttttctttgcaaattgaaagaagcagaattgctagaacctttaatgccagctatc
cgtgcttgtttggagcaccgacacagctatgttagaagaaatgctgttttggccatctat
acaatctataggaattttgaacatcttattcctgatgctcctgaactgatacatgatttt
ctggtgaatgagaaggatgcaagttgcaaaaggaatgcatttatgatgctaattcatgca
gatcaggatcgagctttggattacctaagtacttgcattgatcaagttcaaacatttgga
gacattcttcaattggtgattgttgaactcatttataaggtctgtcatgctaatccatca
gaaagggctcgtttcattcgctgcatctataacttgttgcagtcatctagcccagctgta
aaatacgaagctgccggaacattagtgacactctccagtgcacccaccgcaatcaaggct
gctgctcagtgttacattgatttaattattaaggagagtgacaacaatgtaaaactcata
gttctggatcgattgatagaattaaaagagcatcctgcccatgaacgagtactacaggat
ctggttatggatatcctgagagtactgagcacaccagacttagaagtacgcaagaaaact
ctgcagttagcactggatctcgtctcttctaggaatgttgaagagttggttattgttttg
aagaaggaagtgattaaaacaaataatgtgtctgagcatgaagatactgacaaatacaga
caactccttgtgagaacattgcactcctgttctgtccgatttccagatatggctgcaaat
gttattcctgtgttaatggaatttcttagtgacaataatgaagcagcagctgctgatgtc
ttggagtttgttcgtgaagccattcagcgctttgataacctgagaatgcttattgttgag
aagatgcttgaagtctttcatgctattaaatctgtcaagatttaccgaggagcattatgg
atcctgggagaatactgtagtaccaaggaagacattcagagtgtgatgactgaggtccgc
aggtcccttggggagatcccaattgtagagtcagaaataaagaaagaagctggcgaatta
aaacctgaagaggaaataactgtggggccggttcagaagttggtaactgagatgggcacc
tatgcaactcagagtgcacttagcagttctcgacccacaaagaaagaagaagaaagacct
cccctgagaggcttccttctggatggagatttctttgttgctgcctcccttgccacaact
ctgaccaagattgccttgcgctatgtagctttggttcaggagaagaaaaagcaaaattct
tttgttgctgaggctatgttgctcatggccactatccttcatttgggaaaatcgtctctt
cctaagaagccaattacagatgatgatgtagatcgaatttccttgtgcctcaaggtcttg
tctgaatgttcacctttaatgaatgacattttcaataaggagtgcaggcagtccctttct
cacatgttgtctgctaaacttgaagaagagaaattatcccagaagaaagaatctgaaaag
aggaatgtgacagtacagcccgatgaccccatttcctttatgcaactaactgcaaagaat
gaaatgaactgcaaggaagatcagtttcagctgagcttgctggcagcaatgggcaacaca
cagaggaaagaggcagcagatcccctagcatccaaacttaacaaggtcacccagttgacg
ggtttctcagatcctgtatatgcagaagcttatgttcatgtcaaccagtatgatattgtc
ctggatgtacttgttgtaaaccaaaccagtgatactttgcagaactgcacattagagtta
gctactctgggggatctgaaacttgtggaaaaaccatctcctttgactcttgctcctcat
gattttgcgaatattaaagctaatgttaaagtagcatcaacagaaaatggaataattttt
ggtaatatagtttatgatgtctctggagcagcaagtgacagaaattgtgtagtcctcagt
gatattcacatcgacatcatggactatatccagcctgccacgtgcactgatgctgaattc
cgtcagatgtgggctgaattcgaatgggaaaacaaagtgacggttaacacaaatataatt
gatttaaatgactacttacagcatatattaaagtcaactaacatgaaatgcctcactcca
gagaaggctctttctggttactgtggctttatggcagccaacctgtatgctcggtccata
tttggagaagatgcacttgcaaatgtcagcattgaaaagccaattcaacagggaccagag
gcccctgttactggccacataagaattcgtgcaaagagtcagggaatggccttaagtctt
ggagataaaatcaacttgtctcagaagaaaactagtatataa
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