Neogale vison (American mink): 122912764
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Entry
122912764 CDS
T08764
Symbol
HPS5
Name
(RefSeq) Hermansky-Pudlak syndrome 5 protein
KO
K20191
Hermansky-Pudlak syndrome 5 protein
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nvs04131
]
122912764 (HPS5)
Membrane trafficking [BR:
nvs04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
122912764 (HPS5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_HPS5
Beta-prop_HPS5
WD40_WDHD1_1st
Beta-prop_EML_2
PEP5_VPS11_N
WD40_CDC20-Fz
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_Vps41
Beta-prop_VPS8
Beta-prop_RIG_1st
ribosomal_L24
Motif
Other DBs
NCBI-GeneID:
122912764
NCBI-ProteinID:
XP_044114857
UniProt:
U6CPJ8
LinkDB
All DBs
Position
7:complement(165521270..165569307)
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AA seq
1129 aa
AA seq
DB search
MAFVPVIPESYSHVLAEFESLDPLLSALRLDSSRLKCTSIAVSRKWLALGSSGGGLNLIQ
KEGWKHRLFLSHREGAISQVACCLHDDDYVAVATSQGLVVVWELNQERRGKPERIYVSSE
HKGRKVTALCWDTAILRVFVGDHMGKVSAIKLNTSKQAKAAAAFVMFPVQTITTVDSCIV
QLDYLDGRLLISSLTRSFLCDTEREKFWRIGSKDRDGEYGACFFPGRCSAGQQPLIYCAR
PGSRMWEVNFDGEVISTHQFKKLLSSPPLPVITLRSDPQYDHTVGSSQSLSFPRLLHVSE
HCVLTWTERGIYVFLPQNVQVLLWSEVKDIQDVAVCKNELFCLHLNGKVSHLSLLSVERC
VERLLRRGLWNLAARTCCLFQNSIIAGRGRKSLTIDKLEHLKSQLDVTTYSDLISQLEEL
ILKFEPLDSACSSRRSSVSSHESFSILDSGIYRIISSRRGSQSDEDSCSLHSQTLSEDER
LKEFASHQEEDPPDQCWGSHGSEDSVSHVPRTSETDKNETFLPFSIPLSFRSPSPLVSLQ
AVKESVSSFVRKTTEKIGTLHTSPDLKIRPEPRGEEQLCEEEMSPVTCPKEEDAEGKKEI
VSQPPEEDKLQELKVATAEAMTKLEDPLVLFEPTSLRMILQEWLSQLEKTFAVKDFTVIS
DTGNSSMTSNQDMLSFEESEKEMLDEDSEKEKGDSLGSEETVDPTACESTNSPREPLDDL
FQVCSPCSIASCLQKDVAELTTLCLELNVLNPEIKSASGHVDHTSQQYCPESLACQFIKK
YFFLLDLKRAKESIKLSYANSPCVWDTFIEGLKEMASSNPTYIQMEEGDLPTGIKLLNDS
VPFDSPLLIAHATRLYERFGESALRSLIRFYPSILPSDVMQLCHHHPGQFLAYLDGLVKS
RPEDQRPSFLESLLQPESLRLDWLLLAMSHDAPPSTSMMDDEGNPRPHSHLSSWGYSQLM
LHLIKLPADFTTKEKMTDICKSHGFWPGYLSLCLELERRREAFTNIVCLNDMSLMEGNNG
WLPETVEEWKLLLHLVQNKSTKPSPQKLPNGNFNDGPSPINMENVALLLAKAMGPDRAWS
LLQECGLTVELSERFTRTCDILRIAEKRQRALIQSMLEKCDRFLWSQQA
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgtgccagtgataccagagtcctacagccatgttcttgcagagtttgaatct
ctggatccattactttcagccctgaggctggactccagtcgtctaaagtgcacgagcata
gctgtttctcggaaatggttggctttgggcagttcaggaggaggactcaatctcattcag
aaggaaggctggaagcacaggctctttctttcacacagggaaggtgcaatttctcaggtt
gcctgttgtttacacgatgatgattatgttgctgtagctaccagtcaaggtctcgtagtt
gtttgggaattaaatcaggagcgtcgtgggaaaccagaacgaatttatgtgtcttcagag
cacaaaggccgaaaagttacagctctctgttgggacacagctattcttagagtttttgta
ggtgatcatatggggaaagtttctgccatcaaacttaacacttctaaacaagcaaaggca
gctgctgcgtttgtgatgtttcctgtccagacaataacaacggttgactcctgtattgtg
cagttggattatttggacggaagactccttatatcttcacttactcggtcgttcttgtgt
gacactgagagagaaaaattttggagaattggaagcaaggacagagatggagaatatgga
gcttgtttcttccctggaagatgttctgcgggccagcaacccctaatatattgtgctcgc
cctggctccaggatgtgggaagtgaacttcgatggggaagttataagtacacatcagttt
aagaaactcctctcatcaccacctctccctgtgattaccctaagatcagatcctcagtat
gatcatacagttgggtcctcccaatctttgtctttccccagactcttgcacgttagtgag
cactgtgtgctgacttggacagaaagaggaatttatgttttccttcctcagaatgttcaa
gttcttctctggagtgaagtcaaggatattcaggatgtagctgtctgcaagaatgagctc
ttctgtctgcacctcaacgggaaagtctcacatctttctctgttgtctgtggaacgctgt
gtggaacgcctgctgaggagaggcctgtggaacctggctgctcgcacttgctgtcttttc
caaaattctattattgctggcagaggaagaaaatctttgaccatagataaattggagcat
ttgaagtctcagctggatgtcacaacctacagtgatcttatttctcaactggaagaattg
atcttaaaattcgagcctttggattcagcttgcagcagtagaagaagctccgtttcgtca
catgaaagtttcagcatcttggactctggtatttatcgtatcattagcagtagaagaggc
agtcagtcagatgaagattcttgttcgcttcatagtcaaaccctctcagaagatgaaaga
ctcaaagaatttgcctcacatcaagaagaggacccaccagatcagtgttggggctcacat
ggaagtgaagacagtgtttcccatgttcccaggacatctgagacagataagaatgaaact
tttctccccttcagcattccgctatcatttcgttctccatctcctcttgtgtctcttcag
gctgtcaaggaaagcgtttctagttttgtacgtaaaactactgagaagattggcaccctt
catacaagccctgatctgaaaataagaccagaacccagaggtgaggagcaattatgtgaa
gaggagatgagtccagtcacctgcccaaaggaagaagatgctgagggcaaaaaagaaata
gttagtcaacctccagaagaagacaagctccaagagctcaaagtagcaacagcagaagca
atgaccaagctagaggacccactggttttgtttgaacccacgtctctgaggatgatctta
caggaatggctctcacagttagaaaaaacgtttgccgtgaaggactttacagttatttca
gatactggcaactcatccatgacatcaaaccaggatatgctgtcatttgaagagtcagaa
aaggaaatgttagatgaagacagtgaaaaagaaaagggagactcattaggcagtgaagaa
actgttgatccaacagcgtgtgaatctacaaatagtccgagggagcccttggatgacctt
ttccaagtatgttctccatgcagcatagccagctgtcttcagaaggacgtggctgaattg
acaacgttgtgtttggaattgaatgtattgaatcctgagatcaaaagtgcaagtggacat
gtggaccacacttcgcaacagtactgtcctgaaagtctggcttgccagttcataaagaag
tatttttttctcctggacttgaaaagagcaaaggagagtatcaagcttagttacgctaac
agtccttgtgtttgggatacttttattgaaggactgaaagaaatggcaagttccaatcct
acatatatacagatggaagaaggagacctaccaacaggaataaagttactgaatgactcc
gtcccctttgacagtcctttgttgattgctcatgctacccgattgtatgagaggtttgga
gaatctgcccttcggtccttaatcagattttacccatctattttgccttcggatgtcatg
caactttgtcatcatcatcctggtcagtttttggcctacttagatggtctggtgaaatca
aggcctgaagatcaacggccatcctttcttgagtcccttctacaaccagagtctttgaga
ttggattggctgcttttggccatgtcccatgatgctcccccaagcacaagcatgatggat
gatgaaggaaaccctaggcctcattcacacttgtcttcgtggggctacagtcagctgatg
ctacatctcattaaactacctgcagattttacaaccaaagagaaaatgactgacatctgt
aagtctcatggtttctggcctggatatctttctctttgtttggagctggagagaagaaga
gaggccttcaccaacattgtgtgcctgaatgatatgagcctgatggaagggaacaatggt
tggctcccagagactgtggaggaatggaagcttctcctacatctcgtacagaacaagagc
acaaagccaagcccccagaagttaccaaatgggaacttcaatgatggaccttcccccatc
aacatggagaatgtggcactcctgttagctaaggccatgggcccagatcgggcctggtcc
ctcctacaggaatgtggtttaacggtggagctgtcagagaggtttaccagaacctgtgat
atcctaaggattgctgagaaaaggcagagagccttgatacaaagcatgcttgaaaaatgt
gatcggtttctctggtctcagcaggcctag
DBGET
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