Neogale vison (American mink): 122912838
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Entry
122912838 CDS
T08764
Symbol
CD44
Name
(RefSeq) CD44 antigen isoform X1
KO
K06256
CD44 antigen
Organism
nvs
Neogale vison (American mink)
Pathway
nvs04512
ECM-receptor interaction
nvs04640
Hematopoietic cell lineage
nvs05169
Epstein-Barr virus infection
nvs05205
Proteoglycans in cancer
nvs05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122912838 (CD44)
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
122912838 (CD44)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
122912838 (CD44)
05205 Proteoglycans in cancer
122912838 (CD44)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
122912838 (CD44)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nvs04147
]
122912838 (CD44)
04090 CD molecules [BR:
nvs04090
]
122912838 (CD44)
00535 Proteoglycans [BR:
nvs00535
]
122912838 (CD44)
00536 Glycosaminoglycan binding proteins [BR:
nvs00536
]
122912838 (CD44)
Exosome [BR:
nvs04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122912838 (CD44)
Exosomal proteins of other body fluids (saliva and urine)
122912838 (CD44)
Exosomal proteins of colorectal cancer cells
122912838 (CD44)
Exosomal proteins of bladder cancer cells
122912838 (CD44)
CD molecules [BR:
nvs04090
]
Proteins
122912838 (CD44)
Proteoglycans [BR:
nvs00535
]
Cell surface proteoglycans
Others
122912838 (CD44)
Glycosaminoglycan binding proteins [BR:
nvs00536
]
Hyaluronan
Cell surface receptors
122912838 (CD44)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
Motif
Other DBs
NCBI-GeneID:
122912838
NCBI-ProteinID:
XP_044115006
LinkDB
All DBs
Position
7:180001717..180089430
Genome browser
AA seq
704 aa
AA seq
DB search
MDKFWGRFAWGLCLLQLSLAQIDLNITCRYAGVFHVEKNGRYSISRTEAPDLCKAFNSSL
PTMDQMEKALKVGFETCRYGFIEGHVVIPRIHPNSICAANNTGVYILTSNTSQYDTYCFN
ASAPPEEDCTSVTHLPNAFEGPITITIVNRDGTRYSQTGEYRTNPEDINPSTPADDDVSS
GSSSERSTSGGYIFHTLLPTVYPTQDQDSTGVSDNPENTPITITSAMHSNSQAAVQEQMH
WMWSWFGNSQPKTQDHTAAATTALMSTSGTSPKTATKRREAQDWLSWWFQPSESKNHLHT
TTIMTGTDSNIISAGWELTEENEDERDKHPSYSGSGIDDDEDFISSTIPTTPRLFSHPKQ
NQDWTSRSPGESNPGVLLQTTTRMTAPAQDGHLDQRTTTQSQEDSSWTYFFDPISHPMGR
GHQTERWMDMDSSHSTTHQPPADPNTHLVEDLDRTGPLSVTAQQSQTHSFSTSHGGLEED
KDQPVTSAPTSSSKDDRTDGRGGRRGGHLPEDSATSVEGSTSHSPATGEYRTLIPVTPAN
TGSPGVTEVIIAGDPNSNVIHFFSGDQDSSVHPSGTSHTTHGSESAGHSSGSQEGGANTT
SGPMRKPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKKKLVINNGNGAVGDRKPSG
INGEASKSQEMVHLVNKEPSETPDQFMTADETRNLQNVDMKIGV
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggacaagttttgggggcgctttgcctggggactgtgcctcctgcagctgagcctggcg
cagatcgatttgaatataacctgccgatatgcaggtgtgttccacgtggagaagaacggt
cgttacagcatctccaggacggaggctcctgacctctgcaaggctttcaacagcagcctg
cccaccatggaccagatggagaaagccctgaaagtcgggtttgagacctgcaggtacggg
ttcatagaagggcatgtggtgatcccccgtatccaccccaactccatctgtgcggccaac
aacacaggggtgtacatcctcacatccaacacctcccagtatgacacgtactgcttcaat
gcctcagctccacccgaagaagattgtacatcagtcacacacctgcccaatgcttttgaa
ggaccaattaccataaccattgtcaaccgcgatggcacccgctacagccagacgggggaa
tacagaacgaaccctgaagacatcaaccccagcacccccgctgacgatgacgtgagcagt
ggctcctccagcgagaggagcacttcgggaggctacatcttccacaccctccttccaact
gtgtacccgacccaggaccaagacagtaccggggtgtctgacaacccagagaataccccc
attaccattacctcagctatgcactcaaacagccaagcagcagttcaggagcaaatgcat
tggatgtggtcctggtttggtaactcacagcctaagactcaggatcacacagcagcagca
acaacagctttgatgagcactagtggtacaagtcccaaaacagcaaccaagaggcgagaa
gcccaggattggctttcatggtggtttcaaccatcagagtccaagaatcatcttcacaca
acaacgataatgactggtacggattcaaatatcatctcagcaggctgggaactaactgaa
gaaaatgaagatgaaagagacaaacaccccagttattctggatcaggcattgatgatgat
gaagattttatctccagcaccattccaaccacaccacggctttttagccacccaaaacag
aaccaggattggacttcgcggagccccggtgaatcgaatccaggagtattactgcagact
actacaaggatgactgccccagcccaagacggccatctagatcaaagaacgacaacgcag
agtcaagaggacagctcctggacgtatttctttgaccccatctcacatccaatgggacga
ggtcatcaaacagaaagatggatggatatggactccagccatagtacaacacatcagcct
cctgcagatccaaacacacatttggtggaagacttggacaggacaggacctctttcagtg
acagctcagcagagtcagactcatagcttctctacctcacatggaggcttggaagaagat
aaagaccagccagtgacttctgctccaacatctagcagtaaggatgataggactgatggc
agaggcggaagaagaggtggacatcttcctgaagactcagctacttcagtggaaggctct
acttctcactcacctgccacgggggaatacaggaccctcatcccagtgacccctgccaac
acggggtcgcctggagttactgaagtcattatcgctggagatcccaattctaacgttatt
catttcttttcaggagaccaggactcatcggttcaccccagtggaacgtcccataccact
catggatcagaatcagctggacactcaagtgggagtcaagaaggtggggcaaacacgacc
tcgggtcctatgcggaaacctcagattccagaatggctcatcatcttggcctccctcctg
gccttggctttgattcttgccgtttgcatcgctgtcaatagtcgaagaaggtgtgggcag
aagaagaagctggtgattaataatggcaatggagcggtgggggacaggaagccaagcgga
atcaacggagaggccagcaagtctcaggagatggtgcacttggtgaacaaggagccctcg
gagacccccgatcagtttatgacagctgacgagacgcggaacctgcagaacgtggacatg
aagattggggtgtaa
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