Neogale vison (American mink): 122912988
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Entry
122912988 CDS
T08764
Symbol
FEN1
Name
(RefSeq) flap endonuclease 1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03030
DNA replication
nvs03410
Base excision repair
nvs03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122912988 (FEN1)
03410 Base excision repair
122912988 (FEN1)
03450 Non-homologous end-joining
122912988 (FEN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nvs03032
]
122912988 (FEN1)
03400 DNA repair and recombination proteins [BR:
nvs03400
]
122912988 (FEN1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nvs04147
]
122912988 (FEN1)
DNA replication proteins [BR:
nvs03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
122912988 (FEN1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
122912988 (FEN1)
DNA repair and recombination proteins [BR:
nvs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
122912988 (FEN1)
Exosome [BR:
nvs04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122912988 (FEN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
XPG_I_2
HHH_5
DUF3560
Motif
Other DBs
NCBI-GeneID:
122912988
NCBI-ProteinID:
XP_044115368
UniProt:
U6CSD9
LinkDB
All DBs
Position
7:197527766..197531732
Genome browser
AA seq
380 aa
AA seq
DB search
MGIQGLAKLIADVAPGAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGET
TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAE
EEVEKFTKRLVKVTKQHNDECKHLLSLMGVPYLDAPSEAEASCAALVKAGKVYAAATEDM
DCLTFGSPVLMRHLTASEAKKLPIQEFHLSRILQELGLSQEQFVDLCILLGSDYCESIRG
IGPRRAVGLIQKHKSIEEIVRQLDPSKYPVPENWLHKEAQQLFLEPEVLDPESVELKWSE
PNEEELVKFMCGEKQFSEERIRSGVRRLSKSRQGSTQGRLDDFFKVTGSLSSAKRKEPEP
KGSAKKKAKTGAAGKLKRGK
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgggaattcaaggcctggccaaactgattgctgatgtggcccctggtgccatccgggag
aatgacatcaagagctactttggccgcaaggtggctattgatgcctctatgagcatttat
cagttcctgattgctgttcgccagggtggggacgtgctgcagaatgaggagggggagact
accagccacctgatgggcatgttctaccgcaccatccgcatgatggagaacggcatcaag
cccgtgtatgtcttcgacggcaagccgccgcagctcaagtcgggtgagctggccaaacgc
agcgagcggcgggcggaggcggagaagcagctgcagcaggctcaggccgcgggggccgag
gaggaggtggagaagtttactaagaggctggtaaaggtcaccaagcagcacaatgacgag
tgcaagcacctgctgagcctcatgggcgtcccgtaccttgatgcgcccagtgaggccgag
gccagctgtgccgccctcgtgaaggctggcaaagtctatgccgcggccaccgaggacatg
gattgcctgacctttggcagccccgtgctaatgcggcacctgactgccagcgaggccaag
aagctgcccatccaggaattccacctgagccggattctgcaggagctgggcctgagccag
gagcagtttgtagatctgtgcatcctgctgggcagcgactactgcgagagcattcggggc
attgggcccaggcgggccgtgggcctcatccagaagcacaagagcatcgaggagattgtg
cggcagcttgaccccagcaagtacccggtgccggaaaactggctccacaaggaggcccag
cagctcttcctggagcccgaggtgcttgacccagagtctgtggagctgaagtggagcgag
ccaaacgaagaggagctcgtcaagttcatgtgtggcgaaaagcagttctctgaggagcga
atccgcagtggcgtccgtcggctgagcaagagccgccaaggcagcacccagggtcgcctg
gatgatttcttcaaggtgactggctctctctcttcagctaagcgcaaggagccagagccc
aagggatctgctaagaagaaggcaaagactggggcagcagggaagctcaaaaggggaaaa
taa
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