Neogale vison (American mink): 122913095
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Entry
122913095 CDS
T08764
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
nvs
Neogale vison (American mink)
Pathway
nvs04120
Ubiquitin mediated proteolysis
nvs04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122913095 (SYVN1)
04120 Ubiquitin mediated proteolysis
122913095 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nvs04121
]
122913095 (SYVN1)
Enzymes [BR:
nvs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122913095 (SYVN1)
Ubiquitin system [BR:
nvs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122913095 (SYVN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
zf-HC5HC2H
zf-C3H2C3
zf-Nse
Endonuclease_7
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
122913095
NCBI-ProteinID:
XP_044115572
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Position
7:complement(200099556..200106955)
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AA seq
611 aa
AA seq
DB search
MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHCRIVSLMFLLGTLDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPTQSPAPPEPAEQGPQPAAHPP
PLLPQPPNFPQGLLPPFPPGMFPLWPPMGPFPPVPPPPSSGEAGAPPSASAAALPRPSGA
ATSPGAAAAPAPAPGSAPAPEAGPAPGFPFPPPWMGVPLPPPFAFPPMPVPPAGFAGLTP
EELRALEGHERQHLEARLQSLRNIHTLLDAAMLQINQYLTVLASLGPPRPAASVSPTEET
APAVVTAASPTSIPSSETTTPSPGASPPAPEPEKPPAPESLGTEELPEDGEPDAAELRRR
RLQKLESPAAH
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcaccgcagtgatgatggcggccagcctggcgctgaccggggccgtggtggct
catgcctactacctcaagcaccagttctaccccactgtggtgtacttgaccaagtccagc
cccagtatggcagtcctctacatccaggcctttgtccttgtctttctcttgggcaaagtg
atgggcaaggtgttctttggacagctgagggcagcagagatggagcaccttctggaacgt
tcctggtatgctgtcactgagacttgtctggccttcaccgtctttcgggacgacttcagc
ccccgctttgttgcactcttcaccctccttctcttcctcaagtgttttcactggctggct
gaggaccgtgtggactttatggaacgcagccccaatatctcctggctctttcactgccgc
attgtctccctcatgttcctccttggtaccctggacttcctcttcgtcagccacgcctat
cacagcatcctgacccgcggggcctctgtgcagctggtgtttggctttgagtacgccatc
ctgatgactatggtcctcaccatcttcatcaagtacgtcctgcactccgtggacctccag
agcgagaacccctgggacaataaggccgtgtacatgctctacacggagctgttcacaggc
ttcatcaaggttttgctgtacatggctttcatgactatcatgatcaaggtgcacaccttc
cctctttttgccatccggcccatgtacctggccatgaggcagttcaagaaggctgtgacg
gatgccatcatgtcccgccgcgcaatccgtaacatgaacacactgtatccagatgccacc
ccagaggaactccaggcaatggacaacgtctgcatcatctgccgagaagagatggtgacg
ggggccaagagattgccctgcaaccacattttccacaccagctgcctgcgctcctggttc
cagcggcagcagacctgccccacctgccgcatggacgttctccgggcgtcactgccgacc
cagtcacctgcgcccccggagcctgctgagcaggggccacagccggccgctcacccccca
ccactcctgccgcagccccccaacttcccccagggcctcctgcctccctttcctccaggc
atgttcccgctgtggcccccgatgggccccttcccgcctgtcccacctccccccagctcg
ggagaggctggggcccctccatccgccagtgcagcagcccttcctcggcctagtggagcc
gccacaagcccaggggctgctgcggccccggccccagcccctggctccgcccccgccccc
gaagccggccccgccccaggcttccccttccctcccccctggatgggcgtgccgctgcct
ccgccttttgccttcccccccatgcccgtgccccccgcgggctttgccgggctgaccccg
gaggagctgcgggccctggaaggccacgagcggcagcacctggaggcccggctgcagagc
ctgcgcaacatccacacgctgctggacgccgcgatgctgcagatcaaccagtacctcacc
gtgctcgcctccctggggcctccccgacctgctgcctcagtcagccccactgaggagaca
gcccctgcggtggtcactgctgcctcccccaccagcatccccagctctgagaccaccacc
ccctcccctggggcctccccaccagcccctgagcctgaaaagcctccagctcctgagtca
ctgggcacggaggagctgcctgaggacggggagcccgatgcagcagagctccgccgccgc
cgcctgcagaagctggagtcccctgctgcccactga
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