Neogale vison (American mink): 122913544
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Entry
122913544 CDS
T08764
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM22-like
KO
K11999
tripartite motif-containing protein 6/22/34
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nvs04121
]
122913544
Ubiquitin system [BR:
nvs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122913544
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
SPRY
zf-C3HC4_2
RING_XB3-XBAT31
zf-RING_5
zf-RING_2
U-box
zf-C3HC4_3
zf-RING_6
zf-Nse
SF-assemblin
ApoLp-III
TRAF3_RING
GT4-conflict
Motif
Other DBs
NCBI-GeneID:
122913544
NCBI-ProteinID:
XP_044116169
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Position
7:153708504..153739055
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AA seq
856 aa
AA seq
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MASKLLTDIKEEVTCPICLDLLKEPLSLGCGHSFCKTCITAANKESKTSQEEKSTSCPVC
QFHYCAKELRPNWHVANIVERFREVKVSSEEGQKRNLCERHEEKLLLFCKKDGKVLCWVC
ERSQEHRGHQTVPMEEAVQEYQEKLQTALQKVRKEQQEAEMLNANLSEQRTSWENHVQNE
KRCIQAMFEKLRTLLEHEETHIMQMLFSEEETMLNSFSQXEDEVDKHSQIMEDLISEIEH
RLQGSTVDMLQDVHSVMERSKNLSLKKQKAFLKEQKKVSRIPDLKEIMQMFIGEDLPVAL
EPYGPHLWMTFDDAKDSKLSRTPLLLKPKSQYLLHISAQDSTVRTRRKEGSTAMDFPAQM
NIQQEVTCPICLDLLTMPLSLDCGHSFCQACITAKSQDSGVHQGGESNCPVCQCKYQFWN
LRPNQPLANIVKKVKENMSPWQKKLCELHGEKLLIFCKEDGKFICQHCAQSLEHSGHQIF
FMEKVAKDCQEKLQTALKKLRKEQPKMEELEASIREEKASWKNHMQTERQRILKGFNDMR
ATLDSEEKRVLQKLEEDEVNVLDNLVVARDQLARQKQCLRELISDIEHQIWGSSVDTVQD
MINVMKRSERWTLKKPNIVPKKLKSTFRIPDLSGMLQVFKELTEVQRYWVDVLLKPVNAI
SNIAISADKRQMTTVHNFSLKNVFLCDFSAFDVLGYQHFSSGKYYWEVDVSEKIAWILGV
YCKARNLKRKESSGFVFDPNVNRPDVYSRYKPQFGYWVIGLQNESEYKVFEESSTSDPRI
LTLFIPVPPSRIGVFLDYEARIVSFFNVTNHGSLIYRFSNCQFSHTAYPYFNPWNCQRPI
TLCPPSSFLSPSPTSV
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atggcttctaaactcctgactgacataaaggaggaggtgacctgccccatctgcctggac
ctcctgaaggaacccctgagcctaggctgtggccacagcttctgcaaaacctgcattact
gcagcaaacaaggagtccaagacaagccaggaagagaagagcaccagttgccctgtgtgc
caattccattactgtgctaaggagctgcggcctaactggcatgtggccaacatagtggag
aggttccgagaagtcaaggtgagctctgaggaagggcaaaagagaaatctctgtgaacgc
catgaagagaaactcttgctcttctgtaagaaggatgggaaggtcctttgctgggtttgc
gagcggtctcaggagcaccgtggtcaccaaacggtccccatggaagaggctgtccaagag
taccaggagaagctccagacagctctgcagaaggtgagaaaggagcagcaggaagcagag
atgttgaacgctaacctcagcgaacagagaacctcctgggagaatcatgtgcaaaatgag
aaaaggtgtatccaggcaatgtttgaaaaactgaggactctgctggagcatgaggagaca
catataatgcagatgctgttcagcgaggaggaaactatgctcaactctttttctcagntg
gaggatgaggtggacaagcacagccagataatggaagacctgatttcagaaatagagcat
cggcttcaggggtcaacagtagacatgctgcaggatgtgcattccgtcatggaaaggagt
aagaacttgtctctgaagaaacaaaaagcttttctcaaggaacaaaagaaagtgtccaga
attcctgatctgaaagagataatgcaaatgtttataggtgaggatttgcctgttgccttg
gaaccctatgggcctcatctttggatgacctttgatgatgcaaaggattccaagctctcc
agaactcccttacttctaaaacccaaatcccagtacctgttacacatttctgcacaggac
tccactgtcaggacaagaagaaaggaggggagcactgcaatggattttccagcacagatg
aacatacagcaggaagtgacctgccccatctgcctggatcttctgacaatgcccctgagt
ctggactgtggccacagcttctgccaagcttgcatcactgcaaagagtcaggattcaggg
gtccaccaaggaggggaaagcaactgcccagtgtgccagtgcaaataccagttttggaat
ctccgacctaatcagcccctggccaacatagtgaagaaagtcaaagagaacatgagccca
tggcagaaaaagctctgtgagctccatggagaaaaactcctgatcttctgtaaggaggat
gggaaattcatttgccagcactgtgcccagtctctggagcacagtggtcatcaaatattc
ttcatggagaaggtggccaaggactgtcaggaaaagctccagacagctctgaagaaactg
aggaaggagcagccaaaaatggaggagttggaagctagcatcagagaggagaaagcttcc
tggaagaatcatatgcagactgagagacaaaggattctgaaagggtttaatgacatgaga
gcaaccctggacagcgaggagaagagggtgctacaaaagctggaggaagatgaagtgaat
gtgctggataacttggtagtggccagagaccagctggcccggcagaagcagtgcttaagg
gagctcatctcagatattgaacatcagatatgggggtcatcagtagacacagtgcaggat
atgattaatgtcatgaaaaggagtgagaggtggaccttgaagaagccaaatattgttccc
aagaaactgaagagtacattccgaattccagatctgagtgggatgctgcaagtgtttaaa
gagctgacagaggtccaacgctactgggtggacgtgttgctgaagccagtcaatgctatt
tcgaatattgccatttctgccgataaaagacaaatgacaactgtgcacaacttctctctt
aaaaatgtatttctatgtgatttctctgcttttgatgtcttgggctaccaacatttttcc
tcagggaagtattactgggaagtagatgtgtctgaaaagattgcctggatccttggggtg
tactgtaaagcaagaaacctcaagagaaaagagagctctgggtttgtttttgatccaaat
gtaaatcgtccagatgtttactccagatacaaacctcagtttggctactgggttattggt
ttacagaatgaatctgagtataaggtctttgaggagtcttccacctctgatcccaggatc
ttgactcttttcatacctgttcctccgagtcgtattggggttttccttgactatgaagca
cgtattgtctcatttttcaatgtcacaaaccatgggtcactcatctacaggttttctaat
tgtcagttttctcatactgcttatccatatttcaatccttggaattgtcaacgccccatc
accttgtgcccaccaagttcctttctcagtccctcacccacttctgtgtag
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