Neogale vison (American mink): 122914305
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Entry
122914305 CDS
T08764
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
nvs
Neogale vison (American mink)
Pathway
nvs04068
FoxO signaling pathway
nvs05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
122914305 (RAG1)
09160 Human Diseases
09163 Immune disease
05340 Primary immunodeficiency
122914305 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nvs04121
]
122914305 (RAG1)
Enzymes [BR:
nvs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122914305 (RAG1)
Ubiquitin system [BR:
nvs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122914305 (RAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
122914305
NCBI-ProteinID:
XP_044116876
LinkDB
All DBs
Position
7:181179030..181182161
Genome browser
AA seq
1043 aa
AA seq
DB search
MAVSLPPTLGLASAPEEIQHPHIKFSEWKFKLFRVRSFEKAPEEAQKEKKVSSEGKPSLE
QSPAVPDKADGQKPALSQPAVNVHPKFLKKSHDDRKERDKAIHQANLRHLCRICGNSFKT
DEHNRRYPVHGPVDGKTQVLLRKKERRATSWPDLIAKVFRMDVKADVDSIHPTEFCHNCW
RIMYKKFSSAPCEVSFPRNATMEWHPHTPSCDICRAARQGLKRKSHQPNMQLSKKLKTAV
HRARRARRHKRRVQARISSKEVMQKISNCSHIHLSTKLLAVDFPAHFVKSISCQICEHIL
ADPVETTCKHVFCRICILRCLKVMGSYCPCCQYPCFPTDLESPVKSFLSILNSLMVKCPA
KECNEEISLEKYNHHVSSHKESKETLVHINKGGRPRQHLLSLTRRAQKHRLRELKLQVKA
FADKEEGGDVKSVCLTLFLLALRARNEHRQADELEAIMQGRGSGLQPAVCLAIRVNTFLS
CSQYHKMYRTVKAITGRQIFQPLHALRNAEKVLLPGYHPFEWQPPLKNVSSSTDVGIIDG
LSGLSSSVDDYPVDTIAKRFRYDSALVSALMDMEEDILEGMRAQDLDDYLTGPFTVVVKE
SCDGMGDVSEKHGSGPVVPEKAVRFSFTVMKITIARGSEHVKVFEEVKPNSELCCKPLCL
MLADESDHETLTAILSPLIAEREAMKSSQLMLEMGGILRSFKFIFRGTGYDEKLVREVEG
LEASGSVYICTLCDATRLEASQNLVFHSITRSHSENLERYEVWRSNPYHESVEELRDRVK
GVSSKPFIETVPSIDALHCDIGNAAEFYKIFQLEIGEVYKNPNASKEERKRWQATLDKHL
RKKMNLKPIMRMNGNFARKLMTKETVEAVCELIPSEERHEALRELMDLYLKMKPVWRSSC
PAKECPESLCQYSFNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWA
SEGNESGNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKYLQKFMNAHNAYKNSGFTLS
SQAGVGDPLGLEDSPETQDSMEF
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctctttgccacccaccctgggactcgcttctgccccagaagaaattcagcac
ccgcatattaaattttcagaatggaaatttaaactattcagggtgcgatcttttgaaaag
gcacctgaagaggctcaaaaagaaaagaaagtttcctctgaggggaaaccctctctggag
caatctccagcagtcccggacaaggctgatggtcagaagccagctctgagtcaaccagca
gtaaacgttcaccctaagtttctgaagaaatcccatgatgacaggaaagaaagagacaaa
gccatccaccaagccaaccttcgacatctctgccgtatctgtgggaattcttttaaaacc
gatgagcacaatagaagatatccagtccatgggcccgtggatggtaaaacccaagtcctt
ttacgaaagaaggaaaggagagctacatcctggccagacctcattgccaaggtcttccgg
atggatgtgaaagcagatgttgactccatccaccccactgagttctgccataactgctgg
cgcatcatgtacaagaagtttagcagcgccccatgtgaggtttccttcccaaggaatgca
accatggagtggcacccccacacaccatcctgtgacatctgccgcgctgcccgccaggga
ctcaagaggaagagccatcagccaaacatgcagctcagcaaaaaactcaaaactgcggtt
caccgagccagaagagcccgtcggcacaagagaagagtgcaggcaaggattagcagcaaa
gaagtgatgcagaaaatttccaactgcagtcatatacatcttagtaccaagcttcttgcc
gtggacttcccggcacactttgtgaaatccatctcctgccagatttgtgaacacatcctg
gctgaccccgtggagaccacctgtaagcacgtgttttgcaggatctgcattctcagatgc
ctgaaagtcatgggcagctactgtccctgttgccaatatccctgcttccctaccgacctc
gagagcccagtgaagtcctttctgagcatcttgaattccctgatggtgaaatgtccagcc
aaagagtgcaacgaggagatcagcttggaaaaatacaatcaccacgtgtcaagccacaag
gaatccaaagagactttagtgcatattaacaaggggggtcggccccgccagcatctcctg
tccttgacccgaagggctcagaagcaccgcctgagggagctcaagcttcaagtcaaggct
ttcgccgacaaagaagaaggtggagatgtgaaatcggtgtgtctgaccttgttcctgctg
gcgctgagggccaggaatgagcacaggcaggcggacgagctggaggccatcatgcaggga
cggggctctggcctgcagccagctgtctgcctggccatccgtgtcaacaccttcctcagc
tgcagtcagtaccacaagatgtacaggactgtgaaagccatcactgggaggcagattttt
cagcctttgcatgcccttcggaacgctgagaaggtcctcctgccgggctaccaccccttt
gagtggcagccgcctctgaagaacgtgtcttccagcaccgacgtgggcattattgatggc
ctgtcagggctgtcctcctctgtggacgattaccccgtggacaccattgcgaagcggttc
cgctacgattcagctttggtgtctgctctgatggacatggaggaagacatcctggaaggc
atgagagcccaagaccttgatgactacctcaccggccccttcaccgtcgtggtgaaggag
tcttgcgacggaatgggagacgtgagcgagaagcacggcagcgggcccgtggttccagaa
aaggccgttcggttttcgttcacggtcatgaaaattacgatagcacgtggctctgaacat
gtgaaggtgtttgaagaagtcaaacccaactccgaactgtgctgtaagcccctgtgtctc
atgctggcagatgagtctgaccacgagaccctgacggccatcctgagccctctcattgct
gagagggaggccatgaagagcagccaattaatgcttgagatgggaggcatccttcggagt
ttcaagttcatcttcaggggcaccggctacgatgagaagctcgtgcgggaagttgaaggc
ctcgaggcttctggctcagtctacatttgtaccctttgtgacgccacccgcctagaagcg
tctcaaaatctcgtcttccactccatcaccagaagccactccgagaacctggagcgctat
gaggtgtggcgttctaacccgtaccacgagtccgtggaagagctgcgggaccgggtgaag
ggggtctcatcgaaaccattcatcgagacggtcccttccatcgatgcgctccactgtgac
attggcaatgcagccgagttctacaagattttccagctagagataggggaggtgtacaag
aatcccaacgcctccaaagaggaaaggaagagatggcaagctacgttggacaagcatctc
cggaagaagatgaacctgaaaccgatcatgaggatgaacggcaactttgccaggaagctc
atgaccaaagagaccgttgaagcagtctgtgagttaattccctctgaggagagacacgaa
gctctgagggagctgatggacctttacctgaagatgaagcctgtgtggcgatcatcttgt
cctgccaaagagtgccccgaatctctctgccagtatagcttcaattcacagcgttttgct
gagctcctctctaccaagttcaagtatagatatgagggcaaaatcaccaattattttcac
aaaaccctggcacatgtccctgaaattattgagagagatggctccattggggcatgggcg
agcgagggaaatgagtctggcaacaaactgttcaggcgcttccgaaaaatgaacgccaga
cagtccaagtgctatgagatggaagacgtcttgaaacaccactggctgtatacctccaaa
tacttgcagaagtttatgaatgctcataatgcatataaaaactctgggtttaccttaagc
tcgcaggcaggcgtaggggaccccttaggcttagaggactctccggaaactcaagattcg
atggaattttaa
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