Neogale vison (American mink): 122915055
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Entry
122915055 CDS
T08764
Symbol
USP39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122915055 (USP39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nvs03041
]
122915055 (USP39)
Spliceosome [BR:
nvs03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
122915055 (USP39)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
122915055
NCBI-ProteinID:
XP_044117485
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Position
8:104355844..104382740
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AA seq
565 aa
AA seq
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MSGRSKRESRGSARGKRESESRGSSGRVKRERDREREAEAPSSRGSPVRVKREVEPVSAR
EAPAPIVPAVRVKREREADEDSEPEREVRAKNGRVDSEDRRSRHCPYLDTINRSVLDFDF
EKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYE
IIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVL
QALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEML
QAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKL
PHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILA
KFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDL
REYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQ
MITLSEAYIQIWKRRDNDETNQQGA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtccggccggtccaagcgtgaatctcgtggttctgcccgcgggaagcgcgagtccgag
tcgcggggcagctcgggtcgcgttaagcgggagcgagaccgggagcgggaggccgaggcg
cccagctcccggggcagcccagtgcgtgtgaagcgggaggtcgagccggtgagcgcgcgg
gaggccccggcgcccatagtcccggctgtgcgggtgaagcgggagcgcgaggctgacgag
gactctgagcctgagcgggaggtgcgagcaaagaatggccgtgtggattccgaggaccgg
aggagtcgccactgcccctacctggataccattaacaggagtgtgctggactttgacttt
gagaaactgtgttccatctccctctcacatatcaatgcatatgcctgtcttgtgtgtggc
aaatactttcagggccggggtttgaagtctcatgcctatattcatagcgtccagtttagc
caccatgtcttcctcaacctccacaccctcaagttctactgccttccagacaactacgag
atcatcgattcctcactggaggatatcacatatgtgttgaaacccactttcacaaagcag
cagattgcaaacttggacaagcaggccaagttgtcccgggcgtatgatggtaccacttac
ctgccaggcatcgtgggcctgaataacataaaggccaacgactatgccaacgctgtcctt
caggctttgtctaatgttcctcctctccggaactacttcctagaagaagacaattataag
aacataaagcgtcctccaggggatatcatgttcctgttggtccagcgttttggagaactg
atgagaaagctctggaaccctcgaaattttaaggcacatgtctctccccatgagatgctg
caggctgttgtcctttgcagcaagaagaccttccagatcaccaagcagggggatggagtt
gactttctgtcctggtttctgaatgctctacactcagcgctggggggcacaaagaagaaa
aagaaaactattgtgactgatgttttccaggggtccatgaggatcttcactaaaaagctt
cctcatcctgatctgccagcagaagaaaaagagcagctgctgcataatgacgagtaccag
gagacaatggtggagtccaccttcatgtacctgacgctggatctccctactgctcccctc
tataaggacgagaaggagcagctcatcatccctcaggtgccgctcttcaatatcctggcc
aagttcaacggcatcacggagaaggaatataagacctacaaggagaactttctaaaacgc
ttccagcttaccaagttgcctccatatctcatcttttgtattaagagattcactaaaaac
aatttctttgtggagaagaatccaactattgtcaatttccccattacaaatgtggatctg
agagagtacctgtctgaggaagtacaagcagtgcacaagaataccacgtacgacctcatt
gccaacattgtccatgatggcaagccctcggagggctcctaccggatccatgtgcttcat
catgggacgggcaaatggtatgaattacaagacctgcaggtgactgacatcctcccccag
atgatcacgctttcagaggcttacattcagatttggaagaggcgagataatgatgaaacc
aaccagcaaggggcttga
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