Neogale vison (American mink): 122915178
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Entry
122915178 CDS
T08764
Symbol
SPAST
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nvs04131
]
122915178 (SPAST)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nvs04812
]
122915178 (SPAST)
Enzymes [BR:
nvs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
122915178 (SPAST)
Membrane trafficking [BR:
nvs04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
122915178 (SPAST)
Cytoskeleton proteins [BR:
nvs04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
122915178 (SPAST)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
AAA_5
AAA_22
TIP49
AAA_14
AAA_16
Mg_chelatase
MIT
DUF815
IstB_IS21
nSTAND3
AAA_24
NPHP3_N
AAA_2
Motif
Other DBs
NCBI-GeneID:
122915178
NCBI-ProteinID:
XP_044117748
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All DBs
Position
8:complement(118730431..118786283)
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AA seq
616 aa
AA seq
DB search
MSSPGGRGKKKGSGGCSSPVPPRPPPPCLAPARPAPRPASPPESLHKRNLYYFSYPLFVG
FALLRLVAFHLGLLFVWLCQRFSRALMAAKRSSRAAPAPASASPPAPVPGGEAESVRAFH
KQAFEYISIALRIDEDEKAGQKEQAVEWYKKGIDELEKGIAVIVTGQGEQCERARRLQAK
MMTNLVMAKDRLQLLEKLQPVLQFSKSQTDVYNDSTNLTCRNGHLQSESGAVPKRKDPLT
HTSNSLPRSKTVMKTGSTGLSGHHRAPSCSGLSMVSGVRQGPGPAAGTHKSTPKTNRTNK
PSTPTTAARKKKDLKNFRNVDSNLANLIMNEIVDNGTAVKFDDIAGQELAKQALQEIVIL
PSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGE
KLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRV
LVMGATNRPQELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARM
TDGYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIRLSDFTESLKKIKRSVSPQT
LEAYIRWNKDFGDTTV
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgagttctccgggtggacgagggaagaagaaaggctccggcggctgcagcagcccggtg
cctcccaggcctccgcccccctgcctggcccccgcccgtcccgcccccagaccggcctcc
cctccggagtcgctgcataagcgaaacctgtactacttctcctacccgctgttcgtaggc
ttcgcgctgctgcgtttggtcgccttccacctggggctcctcttcgtgtggctctgccag
cgcttctcccgcgccctcatggccgccaagaggagctcccgggccgcgccggcgccggcc
tcggcctcgcccccggcgccagtgccgggcggggaggccgagagcgtccgagccttccac
aaacaggccttcgagtacatctccattgccctgcgcatcgatgaggacgagaaagcagga
caaaaggagcaagctgtggaatggtataagaaaggtattgacgaactagagaaaggaata
gctgtcatagttacaggacaaggtgaacagtgtgaaagagctagacgccttcaagctaaa
atgatgactaatttggttatggccaaggaccgtttacaacttctagagaagctgcaacca
gttttgcaattttccaagtcacaaacggatgtctataatgacagtactaacttgacatgc
cgcaacggacatctccagtcagaaagtggagctgttccaaaaagaaaagatcccttaaca
cacactagtaattcacttcctcgttcgaaaactgttatgaagactggatccacaggtctg
tcaggccaccacagagcgcctagttgtagtggcttatccatggtttctggagtgagacag
ggacctggtcctgcagctggaactcataagagtacaccaaaaacaaatagaacaaataaa
ccttctacccctacaactgctgctcgtaaaaagaaagacttgaagaactttaggaatgtg
gacagcaaccttgctaatcttataatgaacgaaattgtagacaatggaacagctgttaaa
tttgatgatatagctgggcaagagttggctaaacaagccttgcaagaaattgttattctt
ccttctctgaggcctgagttgttcacagggcttagggctcctgccagaggattgttactg
tttggtccacctggaaatgggaaaacaatgctggctaaagcagtagctgcagaatccaat
gcaaccttctttaatataagtgctgcaagtttaacttcaaaatatgtgggagaaggagag
aaattggtgagagctctttttgctgtggctcgagaacttcagccttccataatttttata
gatgaagttgatagccttctgtgtgaaagaagagaaggagaacatgatgctagtagacgt
ctaaaaactgaatttctaatagaatttgatggtgtacaatctgctggagatgacagagta
cttgtaatgggtgcaactaacaggccacaagagctggatgaggctgttctcaggcgtttc
atcaaacgggtatatgtgtctttgccaaatgaggagacacgactacttttacttaaaaat
ctattatgtaaacaaggaagcccattgacccaaaaagaactagcacaacttgctagaatg
actgatggatattcgggaagtgatctaacagctttggcaaaagatgcagcactgggtcct
atccgagaactgaaacctgaacaagtgaagaatatgtctgccagtgagatgagaaatatt
cgattatctgacttcactgaatccttgaaaaagataaaacgcagcgtgagccctcaaacc
ttagaagcatacatacgttggaacaaggactttggcgataccactgtttaa
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