Neogale vison (American mink): 122915323
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Entry
122915323 CDS
T08764
Symbol
TAF1B
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nvs03021
]
122915323 (TAF1B)
Transcription machinery [BR:
nvs03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
122915323 (TAF1B)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Zn_ribbon_RRN7
Rrn7_cyclin_N
DUF2031
Zn_ribbon_NOB1
Motif
Other DBs
NCBI-GeneID:
122915323
NCBI-ProteinID:
XP_044118028
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Position
8:complement(137317673..137385861)
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AA seq
589 aa
AA seq
DB search
MDLEEAKEFKERCTQCAAVSWGLTDEGKYYCTSCHNVTERSKEVINTGAIPNTKIQAINR
GLKRKRKLEKGWDWYVCEGFQQILYQQAEALKTLGVGPKLKDEVLHNFWKRYLQKSKQAY
CKNPVYTRGRKATVLEDNPSHSDWDSEPDLLSDFSCPSFVESGPDSQLDSRTQKPFPISK
ASQSETASICSGSLDGVKYSQQKEKGIVKMTVPRTLAFCYLSLLWQRETITLSDLLRFVE
EGHIPYINAFQHFPEEMKLYGRDKGIFAIESWPAYEDIYKKMIEIAKFLDLPRFPDITED
CYLHPDILCMKYLMEVNLPDEMNDLTYQVVKMTGIGEVDFLTFDPIAKMAKTVKYDIQAV
AVIVIVLKLLFLLDDNLEWTLSNIAEKYNEKNKEDKPWFDFRKWYQVMKKSVDEKKQKWE
EARAKYVWKSEKPLYHSSIDRAVVYKRREMVVSLQKQFSALTDSAPTVEKKSPSSFQFNW
TEGDSAGTCFHGHSLQGILKKKGQSLTTKNSLYWLSTQKFCRSYCKHVTTYEESNFSLSY
QFIINLFSFLLRIKASSLHEEVSLIEKRLFKRKYSKTQKKSRSRKRRKY
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggatctggaggaagcgaaagagttcaaagaaagatgcactcagtgtgctgctgtctct
tggggtcttactgatgaaggcaaatattattgcacttcttgccacaacgttacagaaaga
tctaaggaagtcataaacactggggctattcctaatactaaaatacaagccatcaaccgg
ggacttaaaagaaaaagaaaactcgagaaaggctgggattggtatgtgtgtgaaggtttt
cagcagatactttatcaacaagcagaagccttaaagacccttggagtcggcccaaaatta
aaggatgaagttttgcataacttttggaagcgctacctgcagaagagcaagcaggcctat
tgtaagaacccggtttatactaggggaaggaaagctacggtattagaagataacccaagt
cattcagactgggatagtgagcctgacctgctgagtgactttagctgtccttcttttgtt
gaaagtggaccagactctcagcttgatagtcgcactcagaagcctttccccatcagcaaa
gcgtcgcaatcagaaacagcatccatctgttctggatctcttgatggagtcaaatattcg
caacaaaaggagaagggaatcgtgaagatgacggtgccaaggacacttgctttttgctat
ctgtctttactgtggcagagagagacaattactctttcggatcttttgagatttgttgaa
gagggccacattccttatataaatgcttttcagcatttcccagaagagatgaaattatat
gggcgcgacaaaggaatttttgctatagagtcttggcctgcctatgaggatatctataaa
aaaatgattgaaatcgccaaattcttagatttgccacgttttccagacataactgaagac
tgctatcttcacccagatatcttgtgtatgaaatacttgatggaagtcaatctccctgat
gaaatgaatgatttaacctaccaagtggtaaaaatgactgggataggagaagtggatttt
ctgacatttgatcctatagctaaaatggcaaaaactgttaaatacgacatacaggctgtc
gcggtcattgtcatagtgttgaaattgctctttttattggatgacaatttagaatggaca
ttgtctaatattgccgagaaatataatgaaaagaacaaagaagataagccatggtttgat
ttcagaaaatggtaccaagttatgaagaaatctgttgatgagaaaaaacaaaaatgggaa
gaagccagggcaaagtatgtgtggaaaagcgaaaagccactttaccactcatccattgac
agagcagtggtatataaaagaagagaaatggtggtgagtctacaaaaacagtttagcgca
ctgactgattcagcaccaactgttgaaaaaaaaagtccttcaagttttcagttcaactgg
actgaaggagactctgcgggaacctgtttccatggccatagcctccaggggatcctgaag
aagaaaggccagtcactgacaaccaagaattcactctattggcttagtacccagaaattc
tgtagaagctattgtaaacacgtgacaacctatgaagaatcaaatttttcgctgagctat
cagttcataataaatctcttctccttcctgctgagaataaaggcttcttctctccatgaa
gaagtgagcttaattgaaaagagactttttaaaagaaaatacagtaaaacacaaaaaaaa
tcaagatccaggaaacggagaaaatattga
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