Neogale vison (American mink): 122915845
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Entry
122915845 CDS
T08764
Symbol
COL20A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XX) chain
KO
K24357
collagen type XX alpha
Organism
nvs
Neogale vison (American mink)
Pathway
nvs04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
122915845 (COL20A1)
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Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
VWA_2
Collagen
Motif
Other DBs
NCBI-GeneID:
122915845
NCBI-ProteinID:
XP_044118505
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Position
8:complement(776066..790698)
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AA seq
1010 aa
AA seq
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MNALTCPHLRLCLWLWLGVALGLGQGQASSRLRLAVLPEDRLQMKWREAEGSGLGYLVQV
KPAAGDAEQEGILTTKTPKAPGGDLSPSKGYTVQIFKLTGSGNALLAQREFVHKDLKSHA
ASGSSRKPPDAAAEPTPSHAGSPGPEPRVASSPGQDSPTPPSLPSLPANPQFRCTPPTPM
DKLFLVDGSWSIGHSHFQQVKDFLARIIEPFEIGPNKVQVGLTQYSGDHQTEWDLSAFRS
KDKVLAAVCSLRYKAGNTFTGLALTHVREQNLKPGAGPHPEAAKVVVLVTDGKSQDHARA
PGRVLKDLGVAVFAVGGERADEAELRLLASPPADVTVHSVRDSPRLGTLAGVLSRLICQK
VQGGSQGPGDCGHPGPGHLFTPTRLTLTQATPSSIHLSWTPDPQLPLKYLVTWRPSGWPP
AEVVLDGPASSVTLHNLTVGTEYLVSVLLVGEAGVGEGLGGLVSTAPLPPPQALTLAAGT
PTTVRLTWRREPAESAQVLWRGTRAATRGFDLVAAFGLVEQEHASLRGAAMERAAFGCAR
TFTLFKTLNAISPPGEVTQRQVPPAVIAATDTGRDPRATLQEVTFDLPEVRKIFFGSFHK
VHVAVGRSKVRLHVDRQKVAERPNGEAGSPPATGFMXAGRLAKARGPRSSSATLQLQLLH
FVCSDSWXEDACCELPAAGEPGPPKQMGPEGLVGRQGSPGTEARTVQGPGGPPRVKGEKG
DHGLPGLKGHPGHQGVPGKVGVQRPKGMRGLEGSASLPGPPGPRGFHGTAGARGTSGERR
PPGAVGPTGLPGPKGERGEKGSRPLSGGEPQSLATIYQLLGQAYESAIQAQVRKFHSFLR
ESARAPRPILEAPGPPSTLGEPSALSHMGTPGPEGNKPPGPPGEQVSPHLWEEGVLRSRM
APMLPTVTLHAPRLGTENGCAGGRKRQEQRVQGGPGSRRGWWEPFLCTIFRTQINSIVLA
KGGCSLQGAVSLGPGAHPCRGEARAPHPGPSERSATHALEDPCPTVSVTS
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccctcacatgcccccatcttcggctttgcctctggctgtggctgggtgtcgcc
ttgggacttggccagggacaagcgagcagccgcctgaggctggccgtgctgcccgaggac
cggctgcagatgaagtggagggaggcggaggggagcggcctcggctacctggtgcaggtg
aagcccgcggcaggggacgcagagcaggaggggattctgaccaccaagacccccaaggcc
ccagggggggacttgagcccctccaagggctacaccgtgcagatcttcaagctcaccggc
tccgggaacgccctgctggcgcagagggagtttgtgcataaggacctgaagagtcacgcg
gcaagcgggagcagccggaagcccccggacgcagccgcggagcccacaccctcccatgcg
gggagcccaggccctgagccccgagttgcctcatccccaggtcaagactcacccactcct
ccctccctcccttccctcccagccaacccccagttccgctgcacaccccccacacccatg
gacaagctcttcctggtggacgggtcctggagtattggccatagtcatttccaacaggtc
aaagatttcctggcccgcatcattgagccctttgagatcgggccaaataaagtccaagtc
ggcctgactcagtacagtggagaccaccagaccgagtgggacctcagcgccttccgcagc
aaggacaaggtgctggcagccgtctgcagcctccgctacaaagcgggaaacacgttcacg
ggcctggccctgactcacgtgcgggagcagaacctgaagccgggagcggggccccatcca
gaggcagccaaggtggtggtcctagtgacggacggcaaatcccaggaccatgcccgtgct
cctggccgcgtcctcaaggacctgggtgtcgccgtctttgctgtgggtggggagagggca
gacgaggccgagctgcggctcctggcgtccccccccgctgacgtcaccgtccacagcgtg
cgggactccccccggcttggcaccctggctggcgtgctcagccgcctcatctgccagaag
gtccaaggcgggagccagggccctggtgactgtggccaccccggccccggacacctcttc
actcccaccagactcaccttgacccaggcgaccccctccagcatccacttgtcctggacc
ccagacccccagctgccgctcaagtatctggtcacgtggcggccttccgggtggccccct
gcagaggtggtgctggacgggcctgcctcgtccgtgacgcttcacaacctgaccgtcggc
accgagtacttggtgtctgtgctccttgtcggcgaggccggggtcggcgagggcctgggg
ggccttgtgagcacagcgcctctgcctccgccccaggcactgaccctggctgcagggacg
cccaccaccgtccgcctcacctggcgccgtgagcccgctgagtcagcccaggtgctgtgg
cggggcacccgtgccgctaccaggggcttcgacctcgtggcggccttcgggctggtggag
caggagcacgcgtccctccgaggcgctgccatggagcgtgcggcgttcggctgcgcccgg
accttcacgctctttaagacgctcaatgcgatcagccccccaggggaggtcacccagcgc
caagtgccccctgccgtgatagctgccacagacacaggccgagaccccagggccaccctg
caagaggtgacctttgacctgcccgaagtgaggaagattttctttggaagcttccacaag
gtgcacgtggccgtgggccgctccaaggtcaggctccacgtggaccgccagaaggtggcc
gagaggccaaatggggaggcgggcagcccacctgccacgggcttcatgnatgctgggagg
ctggccaaggcccggggcccccggagcagctcagccacactgcagctccagctgctgcac
ttcgtgtgcagcgactcctggnccgaggacgcgtgttgcgagctccctgcggcgggagag
cctgggccacccaaacagatgggaccggagggtcttgtaggtcggcaggggtcgccaggg
actgaggcccgaaccgtgcagggacctggaggtccgccaagggtcaaaggagagaaaggg
gaccatgggcttccaggcttgaagggccatcctggtcaccagggcgtccccgggaaggtc
ggagtccagcgaccaaagggaatgcgaggccttgaggggagcgccagcctgcctggacct
ccaggccccaggggcttccatggcacggccggggccaggggcaccagtggggagagacga
cccccaggggccgtggggcccacgggcctaccaggacccaaaggggagcgaggagagaag
gggagtaggcccctgtctgggggcgagccacagtccctggccaccatctaccagctcctg
ggccaggcttacgagtctgccatccaggctcaggtacggaagttccactccttcctccgt
gagagcgccagggcccccagacccatcttggaggcccccgggccccccagcacactcggg
gaacccagcgccctcagtcacatgggcaccccggggccggaagggaacaagcctccagga
cccccaggggagcaggtgagcccccacctgtgggaggagggggtcctgaggagcaggatg
gcccccatgctgcccacagtgaccctgcacgcccccagactcggcactgagaacggctgt
gcgggcgggcggaagaggcaggagcagcgagtccaggggggacctgggagccgaaggggg
tggtgggagcctttcctttgtaccattttccgcactcagataaacagcatcgtgctggcc
aaggggggctgctcactccagggagcggtgtccctggggcccggagcccatccctgccgg
ggcgaggccagggctccccaccctgggccctcagagagaagtgccacccatgcccttgag
gacccctgtcccaccgtctccgttacgtcgtga
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