Neogale vison (American mink): 122915851
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Entry
122915851 CDS
T08764
Symbol
CTCFL
Name
(RefSeq) transcriptional repressor CTCFL
KO
K23195
transcriptional repressor CTCF
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nvs03000
]
122915851 (CTCFL)
03036 Chromosome and associated proteins [BR:
nvs03036
]
122915851 (CTCFL)
Transcription factors [BR:
nvs03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
122915851 (CTCFL)
Chromosome and associated proteins [BR:
nvs03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122915851 (CTCFL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-H2C2_5
zf-C2H2_16
Zf-C2H2_ZNF451_C
zf-C2H2_REST
zf-C2H2_ZN142
zf-C2H2_15
zf-C2H2_7th_ZNF462
C2CH-3rd_BIRD-IDD
Motif
Other DBs
NCBI-GeneID:
122915851
NCBI-ProteinID:
XP_044118512
LinkDB
All DBs
Position
8:5180403..5206717
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AA seq
625 aa
AA seq
DB search
MAETEISVPSGQFTKIKAPELVPEVLLEEEEDRVCRGREPPGPGDGQALCPYRPLQAKGP
ECEQEPLLTTQESEKHILTLQTVHFSEDVSWLSPQPQDGVQVTVQPEGGGPQPLLWLGEG
APPCVTISLQEEVYSLQEMQVMELHVLESGLAGASEESKFVVSLAESSGLLKDEDQLRAE
GRFEPQAGEQLFLVEATPGDEGGDEIVLTISNLHVQGQEDTPASGQGHADKADSPKKTKK
AKEVKRTFRCDSCMFTSSRISSFNRHMKTHSAEKPHMCHLCLKAFRTVTLLRNHVNTHTG
TRPYKCGDCDMAFVTSGELVRHRRYKHTHEKPFKCSLCKYASVEASKLKRHIRSHTGERP
FQCLLCSYASKDTYKLKRHMRTHSGEKPYECHVCHARFTQSGTLKIHIVQKHSENVPKYQ
CPHCATVIARKSDLRVHLRNLHTYKATELKCRCCSAAFHERYALIQHQKTHKNEKRFKCE
HCSYACKQERHMTVHIRTHTGEKPFTCLSCSKCFRQKQLLNAHFKKYHDASFIPAVYGCP
KCGKGFSRWSNMQRHSAKCGAGPGKPAASGKVRRTKRKLAVRKEAVQEDECFRKPQANPP
SDNLEPTGEAPVSAGSVSALLVGSQ
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggcagagactgagatctctgtcccttcggggcagtttaccaaaatcaaagcaccggag
ctggtcccagaagtcctactagaggaggaggaagacagagtatgcagagggagggagccc
ccggggcccggagacgggcaggccctgtgcccctacaggcccctccaggccaaggggccg
gagtgcgagcaggagccgctgctcaccacgcaggagagcgagaagcacattctgacgctg
cagacggtgcacttctccgaagacgtcagctggctcagcccgcagccccaggacggcgtg
caggtgaccgtccagccggagggcggcgggccgcagcccctgctctggctgggcgagggg
gccccgccatgtgtcaccatcagcctccaggaggaagtgtactcgctgcaggagatgcag
gtaatggagctgcacgttctggaaagcggcctggccggggccagcgaagagagcaagttt
gtggtgagcctggcggaaagctctggattgttgaaggacgaggaccagctgcgggctgaa
ggcaggttcgagccccaggcgggagagcagctgttcctggtggaggcgaccccgggagat
gaaggaggagacgaaatcgtgctgaccatttcaaacctgcacgtgcaaggacaggaagat
acgcccgcatccggccaaggacacgctgacaaagccgactcgccaaaaaaaacaaaaaag
gcgaaggaagtaaagcgaaccttccgctgtgatagctgcatgttcacctcttctagaatt
tcgagttttaatcgtcacatgaaaacccacagcgctgaaaagccgcatatgtgtcacctt
tgcctgaaagccttccgcaccgtcactcttctgcggaatcatgtcaatacccacacagga
accaggccctacaagtgcggtgactgcgacatggccttcgtcaccagcggagaactggtc
cgacacagacgctacaaacacacgcacgagaagcccttcaaatgttccctgtgcaagtac
gccagcgtggaagccagcaagctgaagcgtcacatccgctcgcatacgggggagcgtccc
ttccagtgccttctgtgcagctacgccagcaaggacacctacaagctgaagaggcacatg
aggacacactcaggcgagaagccgtacgaatgccacgtgtgccacgctcgcttcacccag
agtggcaccttgaaaatacacatcgtacagaagcacagcgagaatgtccccaagtaccag
tgtccgcactgcgccaccgtcatcgcaaggaagagtgacctgcgtgtccacctgcgcaac
ctgcacacgtacaaggccacagagctgaagtgtcgctgctgctccgcggccttccacgaa
cgctacgccctcattcagcaccagaagactcacaagaacgagaagaggttcaagtgtgaa
cactgcagttacgcctgcaagcaggaacgtcatatgaccgttcacatccgcacccacacg
ggggagaagccattcacctgcctctcgtgcagtaagtgcttccggcagaagcagttgcta
aatgcgcacttcaagaaataccacgacgccagtttcatcccggccgtttacggatgcccc
aagtgtggcaaaggcttctcccgctggagtaacatgcagagacactcggcgaagtgtggc
gcggggccaggaaagccggctgcctcggggaaagtgagaagaaccaagagaaagctggcc
gtccggaaagaagcagtccaggaagacgaatgcttcaggaaaccacaagcaaacccacct
tcagacaaccttgaaccaacaggtgaagccccggtgagcgcaggttctgtgtcggccctt
ctcgtgggcagccagtga
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