Neogale vison (American mink): 122915876
Help
Entry
122915876 CDS
T08764
Symbol
PRPF6
Name
(RefSeq) pre-mRNA-processing factor 6
KO
K12855
pre-mRNA-processing factor 6
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122915876 (PRPF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nvs03041
]
122915876 (PRPF6)
Spliceosome [BR:
nvs03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
122915876 (PRPF6)
Complex C
U5 SnRNP specific factors
122915876 (PRPF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP1_N
TPR_14
TPR_19
HAT_PRP39_N
TPR_16
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_17
TPR_2
FAT
ARM_TT21_2nd
ARM_TT21_C
T7SS_EccA1_N
Motif
Other DBs
NCBI-GeneID:
122915876
NCBI-ProteinID:
XP_044118550
LinkDB
All DBs
Position
8:complement(262020..301609)
Genome browser
AA seq
941 aa
AA seq
DB search
MNKKKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQM
KKSQAADDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERR
EQREKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLT
PVPDSFFAKHLQTGENHTSVDPRQTQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGDLDM
RKIGQARNTLMDMRLSQVSDSVSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKS
VRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKA
VVAQAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDAR
IMLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRHIWITAAKLEEANGNT
QMVEKIIDRAITSLRANGVEINREQWIQDAEECDKAGSVATCQAVMRAVIGIGIEEEDRK
HTWMEDADSCVAHSALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRA
VAHCPKAEVLWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYER
ARRLLAKARSSAPTARVFMKSVKLEWVLGNLTAAQELCEEALKHYEDFPKLWMMKGQIEE
QEELPEKAREAYGQGLKKCPHSTPLWLLLSRLEEKVGQLTRARAILEKSRLKNPKNPGLW
LESVRLEYRAGLKNIANTLMAKALQECPSSGVLWSEAIFLEARPQRKTKSVDALKKCEHD
PHVLLAVAKLFWSERKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQREEVRRR
CENAEPRHGELWCAVSKDIANWQRKIGEILLLVAAHIRNTF
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaagaagaagccgttcctgggcatgcccgcgccgctcggctacgtgccgggg
ctgggccggggcgccaccggctttaccacccgctcagacattgggcccgcccgcgatgca
aatgaccctgtggatgaccgccacgcgcccccaggcaagaggaccgtcggggaccagatg
aagaaaagccaggctgccgacgacgatgacgaggatctgaacgacaccaactatgatgag
tttaatggctatgctgggagcctcttctcaagtgggccctatgaaaaagacgacgaggaa
gcagatgctatttatgcagctctagataaaaggatggatgaaagaaggaaagaaagaagg
gagcaaagggagaaagaagaaattgagaagtaccgtatggaacgccccaaaatccaacag
cagttctcagacctcaaaaggaagttagcagaagtcacagaagaagagtggctgagcatt
cctgaggtcggcgatgctagaaacaagcgtcagcggaacccgcgctatgagaagctgact
cccgttcccgacagtttctttgccaaacatttgcagactggagagaaccatacttcagtg
gatccccgacagactcaatttggaggtcttaacacgccctacccaggcggactgaacact
ccgtaccccggtgggatgacacctggattgatgacgcctggcaccggtgacctggacatg
aggaagataggccaagcacggaacacgctgatggacatgaggctgagccaggtgtctgac
tcggtgagtgggcagactgtggtcgaccccaaaggctacctgacggacttgaactccatg
atcccgacccatggaggggacatcaatgacatcaagaaggcacggctgctcctcaagtct
gttcgggagacgaaccctcatcacccaccagcctggattgcatcagcccgcctggaggag
gtcaccgggaagctgcaggtcgcgcgaaacctcatcatgaaggggacagagatgtgcccc
aagagtgaagatgtctggctggaagcagccaggttgcagcctggggacacagccaaagct
gtggtggcccaagctgtccgtcacctcccacagtctgttaggatctacatcagagcagca
gagctggaaacggacattcgtgccaagaagcgggttcttcggaaagcccttgaacatgtt
ccaaactccgtccgcttgtggaaggcggccgttgagctcgaggagcccgaagatgctaga
atcatgctcagccgcgccgtggagtgctgccccaccagcgtggagctctggctcgctctg
gcaaggctagagacctatgagaacgcccgcaaggtcttgaataaggcccgtgagaacatc
cctacagaccgccacatctggatcacggccgccaagctggaggaagccaacgggaacacg
cagatggtagagaagatcattgaccgagccatcacctctctgcgggccaacggcgtggag
atcaaccgtgagcagtggatccaggatgccgaggagtgtgacaaggctgggagtgtggcc
acctgccaggccgtcatgcgcgccgtgattggcatcgggatcgaggaggaagaccggaag
cacacgtggatggaagatgctgacagctgtgtggcccacagcgcgctggagtgcgcccga
gccatctacgcctacgcgctgcaggtgttccccagcaagaagagcgtgtggctgcgggct
gcgtacttcgagaagaaccacggcaccagggagtccctggaggcgctgctgcagagggct
gtggcccattgccccaaagcggaggtgctgtggcttatgggcgccaagtccaagtggctg
gcgggggatgtacccgcggcgaggagcatcctggctctggccttccaggccaaccctaac
agcgaggagatctggctggccgccgtgaagctggagtctgagaacaacgagtatgagcga
gcccggcgtctgctggccaaggcgcggagcagtgcacctacggcccgggtgttcatgaag
tccgtgaagctggagtgggtgctggggaacctcacggcggcccaggagctgtgtgaggag
gctctgaagcactacgaggacttccccaagctgtggatgatgaaggggcagatcgaggag
caggaagagctgccggagaaggctcgggaggcctacggccaggggttgaaaaaatgtccg
cactccacccctctgtggctcctgctttctcggctggaggagaaggttgggcagctgacc
cgagctcgggccatcctggagaagtcgcgcctgaagaacccaaagaacccaggcctgtgg
ctggagtccgtcaggctggagtaccgagcggggctgaagaacatcgcgaacacgctgatg
gccaaggcgctgcaggagtgccccagctccggtgtcctgtggtctgaagccatctttctt
gaggcaaggccccagaggaagaccaagagcgtcgatgccctgaagaagtgtgagcacgac
ccccacgtcctcctggctgtggccaagctgttctggagcgagcggaagatcaccaaggcc
agggagtggttccaccgcacggtcaagatcgactcggacctgggggacgcttgggccttc
ttctacaagtttgagctgcagcacggcacagaggagcagcgagaggaggtgaggaggcgc
tgtgagaacgccgagccgcggcacggggagctgtggtgcgctgtgtccaaggacatcgcc
aactggcagaggaagatcggggagatcctcctgctcgtggcggcccacatcaggaacacc
ttctga
DBGET
integrated database retrieval system
