KEGG   Neogale vison (American mink): 122915946
Entry
122915946         CDS       T08764                                 
Symbol
RAE1
Name
(RefSeq) mRNA export factor
  KO
K14298  mRNA export factor
Organism
nvs  Neogale vison (American mink)
Pathway
nvs03013  Nucleocytoplasmic transport
nvs05014  Amyotrophic lateral sclerosis
nvs05164  Influenza A
Brite
KEGG Orthology (KO) [BR:nvs00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    122915946 (RAE1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    122915946 (RAE1)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    122915946 (RAE1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nvs03019]
    122915946 (RAE1)
   03036 Chromosome and associated proteins [BR:nvs03036]
    122915946 (RAE1)
Messenger RNA biogenesis [BR:nvs03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     122915946 (RAE1)
Chromosome and associated proteins [BR:nvs03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    122915946 (RAE1)
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40 WDR55 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_TEP1_C WD40_RFWD3 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_IFT140_1st NBCH_WD40 WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd Beta-prop_Nup120_160 WDR90_beta-prop_4th Beta-prop_SPT8
Other DBs
NCBI-GeneID: 122915946
NCBI-ProteinID: XP_044118713
UniProt: A0A8C7C285
LinkDB
Position
8:complement(5302949..5322875)
AA seq 368 aa
MSLFGTTSGFGTSGTSMFGSTSTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAG
SWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQA
IQIAQHDAPVKTVHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIY
PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPIAACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAE
ELKPRNKK
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgagtctgtttgggacaacctcgggttttggaactagtgggaccagcatgtttggcagc
accagcacagataaccacaaccctatgaaggatattgaagtaacatcctctcctgatgac
agcattggttgtctgtcttttagcccaccaaccttgcctgggaacttccttatcgcagga
tcatgggctaacgatgttcgctgctgggaagttcaagatagtggacagactattccaaaa
gcccagcagatgcacacagggcctgtcttagatgtctgctggagcgatgatgggagcaaa
gtatttacagcatcatgtgataaaactgccaaaatgtgggacctcaacagcaatcaggca
atacagattgcacagcacgatgcccctgtgaagaccgtacactggatcaaagcgcccaac
tacagctgtgtgatgaccgggagttgggataagactctgaagttttgggatacacgatca
tcaaatcctatgatggttttgcagctccctgaaagatgttactgtgccgatgtgatctac
cctatggctgtggtagccactgcagagagaggactgattgtctaccagttagagaaccaa
ccatccgagttcaggaggatagagtctccactgaagcatcagcatcgatgtgtggctatt
tttaaagacaaacagaacaagccgactggtttcgccctgggaagcatcgaggggagggtt
gctattcactacatcaaccccccaaatcccgccaaagataacttcaccttcaaatgtcac
cgctcgaacggaaccaatacctcagctcctcaggacatctatgcggtaaatgggatcgca
ttccatcctgtccacggcacacttgccacggtggggtcggatggcagattcagcttttgg
gacaaagatgccagaacgaaactaaaaacttccgaacagctggaccagccgatagcggct
tgctgcttcaatcacaacggaaacatattcgcctacgcctccagctacgactggtcaaag
ggacacgaattttataatccacaaaagaaaaattacattttcctgcgtaatgcagccgaa
gagctaaaacccaggaataagaagtag

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