Neogale vison (American mink): 122916115
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Entry
122916115 CDS
T08764
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nvs03041
]
122916115 (RBM39)
Spliceosome [BR:
nvs03041
]
Common components
Common spliceosomal components
General mRNP proteins
122916115 (RBM39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_7
POP1_C
IHO1
Motif
Other DBs
NCBI-GeneID:
122916115
NCBI-ProteinID:
XP_044119057
LinkDB
All DBs
Position
8:22913420..22947000
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AA seq
530 aa
AA seq
DB search
MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQP
LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPS
IAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatattgatattgaagcaatgcttgaggctccttacaagaaggatgagaac
aagttgagcagtgctaacggccatgaagagcgtagcaaaaagaggaaaaaaagcaagagc
agaagtcgtagtcatgaacggaaaagaagcaaaagtaaggaacggaaacgaagtagagat
agagaaaggaaaaagagcaaaagccgtgaaaggaagcgaagtaggagcaaagagaggagg
cggagccgctcaagaagtcgagatcgcagattcagaggccgctacagaagtccttactcc
ggaccaaaatttaacagtgccatccgaggaaagattgggttgcctcatagcatcaaatta
agcagacgacgttcccgaagcaaaagtccattcagaaaagacaagagccctgtgagggaa
cctattgataatctaactcctgaagaaagagatgcaaggacagttttctgcatgcagctg
gcagcaagaattaggccaagggatttggaagagtttttctctacagtaggaaaggttcga
gatgtgagaatgatttctgatagaaattcaagacgttccaaaggaattgcatatgtggag
tttgttgatgttagctcagtgcctctagcaataggattaactggccaacgtgttttagga
gtgccaatcatagtacaagcatcacaggcagaaaaaaacagagctgcagcaatggcgaac
aatctacagaagggaagtgctggacctatgaggctttatgtgggctcgttacactttaac
ataactgaagatatgcttcggggaatctttgagccttttggaaggattgaaagtatccag
ctcatgatggatagtgaaacaggtcgatctaagggatatggatttattacgttttctgat
tcggaatgtgccaagaaggctttggagcagcttaatggatttgagttagcaggaagacca
atgaaagttggtcatgttactgaacgtactgatgcttccagtgctagctcattcttggac
agtgatgaactggaaaggactggaattgacttgggaacaactggtcgtctccaattaatg
gcaagacttgcagaaggcacaggtttgcagattccaccagcagcacagcaggctctacaa
atgagtggctctttggcatttggtgctgtggcagaattctcttttgttatagatttgcaa
acaagactttctcaacagactgaagcttcagctttagctgcagctgcctctgttcagcct
cttgcaacacagtgtttccaactttctaacatgtttaaccctcaaacagaagaagaagtt
ggatgggatacagagattaaggatgatgtgattgaagaatgtaataaacatggaggagtt
attcatatttatgttgacaaaaattcagctcagggcaacgtgtatgtgaagtgcccatca
attgctgcagccattgctgctgtcaatgcattgcatggcaggtggtttgctggtaaaatg
ataacagcagcatatgtacctcttccaacttaccacaacctcttccctgattctatgaca
gcaacacaactactggttccaagtagacgatga
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