Neogale vison (American mink): 122916183
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Entry
122916183 CDS
T08764
Symbol
RBCK1
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1 isoform X1
KO
K10630
RanBP-type and C3HC4-type zinc finger-containing protein 1 [EC:
2.3.2.31
]
Organism
nvs
Neogale vison (American mink)
Pathway
nvs04217
Necroptosis
nvs04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
122916183 (RBCK1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
122916183 (RBCK1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nvs04121
]
122916183 (RBCK1)
Enzymes [BR:
nvs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
122916183 (RBCK1)
Ubiquitin system [BR:
nvs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
122916183 (RBCK1)
Multi subunit type E3
LUBAC complex
122916183 (RBCK1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
zf-RING_2
zf-C3HC4_2
zf-RING_5
Zn_ribbon_RanBP
IBR_1
zf-C3HC4
zf-RING_11
ubiquitin
DUF5959
Motif
Other DBs
NCBI-GeneID:
122916183
NCBI-ProteinID:
XP_044119232
LinkDB
All DBs
Position
8:27131816..27148423
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AA seq
510 aa
AA seq
DB search
MDEKTKKAEEMALRLSRAVAGGDEKVAVQCAIWLAEQRVPLSVRLKPEVSPTQDIRLWVS
VEDAQMHTVTIWLTVRPDMTVASLKDMVFLDYGFPPVLQQWVIGQRLARDQETLHSHGVR
RNGDTAYLYLLSACNTSLNPQELQRERQLRMLEDLGFKDLTLQPRGPLEPAPGKPGVPQE
PGRGQPEATPESPPVGWQCPGCTFINKPTRPGCEMCCRARPEAYQVPASYQPDEEERARL
AGEEEALRQYQQRKQQQQEGNYLQHVQLDQRSLVLNTEPTECPVCYLVLAPGDAVVLREC
LHAFCRECLQGTIRNSQEAEVSCPFIDNTYSCSGKLLEREIRALLPPEDYQRFLDLGVSI
AENRSAFSYHCKTPDCKGWCFFEDDVNEFTCPVCFHVNCLLCKAIHEQMNCKEYQEDLAL
RAQNDVAARQTTEMLRSMLQQGEAMHCPQCRIVVQKKDGCDWMRCTVCHTEICWVTKGPR
WGPGGPGDTSGGCRCRVNGIPCHPSCQNCH
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggacgagaagaccaagaaagcggaggagatggccctgagactcagccgagccgtggcc
ggcggggatgaaaaggtggcagtgcagtgtgccatctggctggcagagcagcgggtgccc
ctgagcgtgcgactaaagcctgaggtctccccaacacaggatatcaggctgtgggtaagc
gtggaggatgctcagatgcacacagtcaccatctggctcacagtgcgtcctgacatgacc
gtggcttccctcaaggacatggtattcctggactatggctttccgcctgtcctgcagcag
tgggtgattgggcagcggctggcccgggaccaggagaccctgcactcccatggggtgcgg
cggaatggggacactgcctacctctatctgctgtcagcctgcaacacctcactcaaccct
caggagctgcagcgggagaggcaattgcggatgctggaagatctgggcttcaaagacctc
acgctgcagccccggggccccctggagcctgcccccgggaagcccggagtcccccaggag
ccggggcggggccagcctgaggccacgccggaatccccgccggtgggctggcagtgcccg
ggctgcaccttcattaacaagcccacgaggcccggctgcgagatgtgctgccgggcgcgg
cctgaggcgtatcaggtccccgcctcgtatcagccggacgaggaggaaagagcgcgcctg
gcgggcgaggaggaggcactgcgccagtaccagcagcggaagcagcagcagcaggagggg
aactacctgcagcacgtccagctggatcagaggagcctggtgctgaacaccgagcccacc
gagtgccccgtgtgctacttggtgctggcgcccggcgatgccgtggtgctgcgtgagtgt
ctgcacgccttctgcagggagtgtctgcagggcaccatccgcaacagccaggaggcggag
gtttcttgccccttcattgacaacacatactcgtgctcgggcaagctgctggagcgggag
atccgggcgctactgccccctgaggattaccagcggtttctggacctgggtgtctccatc
gcagaaaaccgcagtgccttcagctaccactgcaagaccccggactgcaagggatggtgc
ttctttgaggatgatgtcaacgagtttacgtgcccggtgtgcttccacgtcaactgcctg
ctctgtaaggccatccatgagcagatgaactgcaaggagtaccaggaggacttggccctg
cgggctcagaacgatgtggccgcccggcagacgacagagatgctcaggtccatgctgcag
cagggcgaggccatgcactgcccgcagtgccggatcgtggtgcagaagaaggacggctgt
gactggatgcggtgtactgtctgccacacggaaatctgctgggtcaccaaaggcccgcgc
tggggccccgggggcccaggagacaccagcgggggctgccgttgccgggtgaacgggatt
ccttgccaccccagctgtcagaactgccactag
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