Neogale vison (American mink): 122917141
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Entry
122917141 CDS
T08764
Symbol
DDX31
Name
(RefSeq) probable ATP-dependent RNA helicase DDX31
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nvs01009
]
122917141 (DDX31)
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nvs03009
]
122917141 (DDX31)
Enzymes [BR:
nvs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122917141 (DDX31)
Protein phosphatases and associated proteins [BR:
nvs01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122917141 (DDX31)
Ribosome biogenesis [BR:
nvs03009
]
Eukaryotic type
Pre-60S particles
Helicases
122917141 (DDX31)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
ERCC3_RAD25_C
SNF2-rel_dom
Helicase_C_2
SecA_DEAD
Motif
Other DBs
NCBI-GeneID:
122917141
NCBI-ProteinID:
XP_044120548
LinkDB
All DBs
Position
9:3789022..3857917
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AA seq
738 aa
AA seq
DB search
MAAAGGLLLHVTEAPAGGPGTLSGPRRAQARRQAEATKRKHQASGEAPPAKRRNKAAFLL
AKKATAKETQRTFKGKAQKTFSPRKSLVGVSDGTREQKLCVRTSSLFKNNPEIPELHRPV
VKQVQEEVFTSEAFHELDLHPHLISTINTVLNMTSMTSVQKQSIPALLEGRDALVRSQTG
SGKTLAYCIPVVQTLQAMKSKIQRSDGPYALVLVPTRELALQSFDTVQKLLKPFTWIVPG
VLMGGERRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFRRIRWLILDEADRILDLGF
EKDIMVILNAVNAECQKRQNVLLSATLTEGVTRLADISLLNPVRISVLDEHRGQSEPQGG
AVLEASPLPAGSEPDSFAIPESLHQHVALVPSKLRLVSLAAFILQKCKFEKDQKMIVFFS
SCELVEFHYHLFLQTLPSRLGAPASGQPPSASTRLKFLRLHGNMEQEERTAVFQEFSHSK
TGVLLCTDVAARGLDLPQVTWIVQYNAPSSPAEYIHRIGRTARIGCHGSSLLILAPSEAE
YVNSLASHKINVSEMKMEEILSALTRDDCFKGSRWGSQKSRAAGPQEIRERATVLQTVFE
DYVHSSESRVSWAKKALQAFIRAYATYPRELKPIFHVRSLHLGHVAKSFGLRDAPQNLGV
AVVKRRKANPSRPDLPKKTRSKHCLAEILRSEYSSGMEARVAKVKKQNKQAEPGSQPRSA
VCHRRPASAVGKTKKRFP
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgccggcgggctgctcctccacgttacggaggccccggccggcggccccggg
acgctctccggaccccgccgggcccaggcgaggcggcaagcagaggccaccaaaagaaaa
caccaagcatccggggaggctcccccagcgaagcggaggaacaaggcagcgtttctcctg
gccaagaaagctactgctaaagaaacacaaaggacttttaaggggaaggcacagaaaaca
ttttctccaaggaaatctttggtcggtgtgagtgacggaacccgagaacagaaactgtgc
gttaggacttcgtcgttatttaaaaacaaccctgaaatcccagagctccacagacctgtc
gtaaagcaggtacaagaagaggtgttcacttcggaagctttccatgaactggacctccac
ccacatttaatttccacaataaatacagtcttaaacatgactagtatgaccagcgttcag
aagcaaagtattccggcgttgctggaaggcagagatgctctggtgagatcacagacgggc
tcaggtaaaactcttgcctactgcatccctgtggtccagacacttcaagcaatgaaatca
aaaatacagcgcagtgatggcccctatgccctggtactggtgccgacaagagagctggct
ctgcaaagctttgacactgtccagaaactgcttaagccatttacctggattgtgcctgga
gtgttaatgggaggagagagaaggaaatcagaaaaggccagactccgcaaaggaataaat
atccttatctcgactcctgggcggctggtggatcatatcaaatccacgaagaacattcat
tttcgtcggatacggtggctgattttggatgaagcagacagaatcctggatttgggtttt
gaaaaggatatcatggtgatactcaatgctgtaaatgctgagtgccagaaacgacagaac
gtcttactatcggcgacactcacagaaggtgtgacccggctagctgatatcagcttgctc
aatccggtcaggatttctgtccttgatgagcaccgtggccagtctgagccacagggcgga
gcagttctggaggcctcccctctcccagctggcagcgagccggacagctttgcgattcca
gaaagtctccatcagcacgtggccctggttcccagcaaactgaggctcgtctccctggcg
gccttcatcctgcagaagtgcaagtttgaaaaagaccagaagatgatcgtctttttctcg
agttgtgagctggtggagttccactaccacctcttcctgcagaccctgccgagccgcctc
ggggccccggcgtccgggcagccgccatctgcgtccacgcgattaaaattcctgcggctg
cacggcaacatggagcaggaggaaagaacagcagtgtttcaagaattttcacattccaag
acaggcgtccttctttgtacggatgttgcagctcggggcttagatctccctcaagtcacg
tggattgttcagtacaacgcgccgtcgtcacctgctgaatacatccaccggatcgggaga
accgcccggattggctgccatgggagcagcctgctcattttggctccttcggaggcagaa
tatgtcaactcgttggcttctcacaaaatcaacgtgtctgagatgaagatggaagagatt
ttgtctgctctgacaagggacgactgtttcaaagggagccggtggggaagccagaaatcc
cgtgctgccggcccccaggaaatccgagagcgagccacagtcctgcagacggtatttgaa
gattacgtgcactccagtgagagcagggtctcctgggcgaagaaagctctgcaggccttc
atccgcgcctacgccacctacccccgggagctgaagcccatcttccatgtccggtcgctg
cacctcggccacgtggccaagagcttcgggctgagggacgccccccagaatcttggtgtc
gcagttgtgaagagaaggaaagcaaacccaagcaggcctgaccttcctaagaagacccgg
agtaaacactgcctcgctgaaatcttgcgttcggaatactcaagtgggatggaggcccgc
gtcgccaaggtcaaaaagcaaaacaaacaggcagagcccggcagccagccacgcagcgct
gtctgccaccggcgcccagcctcagccgtgggaaaaactaagaaacgcttcccgtga
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