Neogale vison (American mink): 122917246
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Entry
122917246 CDS
T08764
Symbol
GAPVD1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nvs04131
]
122917246 (GAPVD1)
Membrane trafficking [BR:
nvs04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
122917246 (GAPVD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
Motif
Other DBs
NCBI-GeneID:
122917246
NCBI-ProteinID:
XP_044120841
LinkDB
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Position
9:complement(9647861..9722630)
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AA seq
1460 aa
AA seq
DB search
MVKLDIHTLAHHLKQERLYVNSEKQLIQRLNADVLKTAEKLYRTAWIAKQQRINLDRLII
TSAEASPAECCQHAKILEDTQFVDGYKQLGFQETAYGEFLSRLRENPRLIASSLVAGEKL
NQENTQSVIYTVFTSLYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDPNKLIDRFSPLQQEKLFGEKGS
ERFRQKVQEMVDSNEAKLVALVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLEVG
EVRAMCTDLLLACFICPAVVNPEQYGIISDAPINEVARFNLMQVGRLLQQLAMTGSEEGD
PRTKSSLGKFDKSCVAAFLDVVIGGRAVETPPMSSVNLLEGLSRTVVYITYSQLITLVNF
MKSVMSGDQLREDRMALDNLLANLPQAKPGKSSSLEMTPYNTPQLSPATTPANKKNRLPI
ATRSRSRTNVLMDLHMDHEGSSQETIQEVQPEEVLVISLGTGPQLTPGMMSENEVLNMQL
SDGGQGDVPVDENKLHGKPDKTLRFSLCSDNLEGISEGPSNRSNSVSSLDLEGESVSELG
AGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFEIRDMMGLTDDRDISETVSETWSTDVL
GSDFDPNIDEDRLQEIAGAAAENMLGSLLCLPGSGSVLLDPCTGSTISETTSEAWSVEVL
PSDSEAPDLKQEERLQELESCSGLGSTSDDTDVREVSSRPSTPGLSVVSGISATSEDIPN
KIEDLRSECSSDFGGKDSVTSPDMDEVTHGAHQLTSPPSQSESVLAMFDPLSSHEGASAV
VRPKVHYARPSHPPPDPPILEGAVGGNEARLPNFGSHMLTPAEMEAFKQRHSYPERLVRS
RSSDIVSSVRRPMSDPSWNRRPGNEERELPPAAAIGATSLVAAPHSSSSSPSKDSSRGET
EERKDSDDEKSDRNRPWWRKRFVSAMPKAPIPFRKKEKQEKDKDDVGPDRFSTLTDDPSP
RLSAQAQVAEDILDKYRNAIKRTSPSEGAMASYESTEVVGDGESAHDSPREETLQNISAD
DLPDSASQAAHPQDSAFSYRDAKKKLRLALCSADSVAFPVLTHSTRNGLPDHTDPEDNEI
VCFLKVQIAEAINLQDKNLMAQLQETMRCVCRFDNRTCRKLLASIAEDYRKRAPYIAYLT
RCRQGLQTTQAHLERLLQRVLRDKEVANRYFTTVCVRLLLESKEKKIREFIHDFQQLTAA
DDKTAQVEDFLQFLYGAMAQDVIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDI
LRDQVLHEHIQRLSKVVTANHRALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCIL
RMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLSTVQYISSFYASCLSGEES
YWWMQFTAAVEFIKTIDDRK
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctggatattcacaccttggcccatcaccttaagcaggaacgcttatatgtg
aactctgagaaacagctcattcagaggctcaatgcagatgtccttaagacagctgaaaag
ttgtatcgtacagcatggattgctaagcaacagagaattaatttggatcggcttatcata
accagtgctgaagcttcccctgctgaatgttgccaacatgccaagattttggaagataca
cagtttgttgatggatacaagcaattgggatttcaggagactgcttatggagaattcttg
agtcgattaagggaaaatcctcgtcttattgcctcctctttggttgctggggagaaactg
aatcaggagaacacacaaagtgttatatacacagtttttacctccctttatggcaactgc
atcatgcaagaagatgaaagctacctccttcaggttttgagatacttgattgaatttgaa
cttaaagaaagtgacaaccccaggcgacttttgaggagaggaacctgtgccttcagcatc
ttatttaaacttttttctgaaggactgttttccgccaaacttttcctcacagccacttta
catgagccaatcatgcagctgcttgttgaagatgaagaccacctggagacagatcccaac
aagctgatcgataggttctccccattacaacaggaaaagctctttggagagaaaggctca
gagaggttcaggcaaaaggttcaagagatggtggattccaatgaggccaaactggtggct
ctggtgaacaagtttattggttatctcaaacagaacacgtactgctttccacatagtttg
aggtggattgtgtcacagatgtacaaaaccctctcctgtgtagacagactggaagttggg
gaggtcagggcaatgtgtactgatctcctcttggcctgcttcatttgtcccgcagttgtc
aatccagaacagtatggaataatttctgatgctcctattaatgaggtagcaagatttaat
ctgatgcaggttggccgccttttgcagcagttggcaatgaccggctctgaagagggagat
ccccggacaaagagcagccttggaaaatttgacaaaagctgtgttgctgcctttcttgat
gttgtgattgggggccgtgcagtggagacccctccaatgtcctccgttaatcttctggaa
ggattgagcagaactgtggtttatataacgtatagtcagcttattactctggtgaatttt
atgaagagtgtgatgtctggagatcaactgagagaagataggatggctcttgacaattta
ttggcaaacctgccccaggcaaagccgggaaaaagcagcagtttggaaatgaccccgtat
aatactcctcagctgtctccagcaaccactccggcaaataaaaagaatcgattgcctata
gcaactcgaagtagaagccgcaccaatgtgctaatggacttacatatggaccatgaagga
tcatctcaagaaaccatccaggaagtacagccagaagaggtgttggtcatttccttaggg
acaggtccccagctcactccagggatgatgtcagaaaatgaggtcctaaacatgcaactt
tcggatggaggacaaggagatgtccctgtcgatgaaaacaaactccacggtaaacctgat
aaaaccttgcgcttttccctctgcagtgataatctggaaggaatatctgaaggtccatca
aatcgctctaattcagtgtcctctctagacctggaaggagagtctgtatcagaacttgga
gcaggaccttctgggagtaatggagttgaagctctccagctattagagcatgaacaagct
acaacacaagataatcttgatgataagctgaggaagtttgaaatacgtgacatgatggga
ctgacagatgacagagatatatcagaaacagtgagtgagacctggagtacagatgtcttg
ggaagtgattttgaccctaacattgatgaagatcgcttacaagaaattgcaggtgcagca
gcagagaacatgttaggcagtttactgtgcctgccaggttcagggtcagtgcttcttgac
ccctgcactggttctaccatatcagagacaacaagcgaagcttggagtgtagaggtattg
ccaagtgattcagaggccccggatctaaagcaggaggagcgtctacaagagctggagagc
tgctctggactaggtagcacatctgatgatacggatgtcagggaggtcagttcccgcccc
agcacaccaggcctcagtgttgtgtcgggcataagtgcaacctctgaggatattcccaat
aagattgaagatctgagatccgagtgcagctctgattttgggggtaaagattctgtcact
agtccagacatggatgaagtaactcatggcgcccaccagctgacctctcccccttcccag
tccgagtctgtacttgccatgtttgatccgctgtcttcacatgaaggagcttctgctgtg
gtaaggccaaaggttcattacgccaggccgtcgcatccaccaccagatcccccaatcctg
gaaggagctgtgggaggaaatgaggccaggttgccgaactttggttcccatatgttaact
ccagctgaaatggaggcattcaagcaaaggcattcttacccagagagattagttcgcagc
aggagctctgatatagtatcatctgtccggagacccatgagtgaccccagctggaaccgt
cgtccagggaatgaagagcgagaactccctccggccgcagccattggtgctacttctttg
gtggctgcacctcactcatcatcttcgtccccgagtaaggactcctcaagaggagagact
gaagaacgcaaagatagcgatgatgagaaatcagacaggaacagaccttggtggagaaaa
cgttttgtttctgccatgcctaaagctcctataccatttagaaagaaagaaaaacaagaa
aaagacaaagatgatgtggggcctgacagattctcaacactcacagatgatcccagccct
agactcagtgcgcaagctcaggtcgctgaggatattctggacaaatacaggaatgccatt
aagcgaaccagccccagtgaaggagcaatggcgagctatgaaagtacagaggtcgtgggc
gacggggagagcgcccacgactctccccgagaggagacgctgcagaacatctccgccgac
gatctcccggactccgcgagccaggcggcccacccccaggattctgctttctcctacaga
gacgcaaaaaagaaactgagacttgctctttgctctgcggattctgttgctttcccagtg
ctcacccattcaacaaggaacggtttaccggaccatacagacccagaggacaatgaaatt
gtatgcttcttaaaagttcagatagctgaagcaattaatttacaagataagaacttaatg
gcgcaacttcaagaaacaatgcgttgcgtgtgccgctttgataacagaacttgcagaaaa
ctgctggcctctatcgctgaggactacaggaaaagggcgccctatattgcttatctcact
cgctgtcggcaaggactgcagaccacacaggcccacctggaaaggctacttcagcgggtg
ttgcgggacaaagaggtggccaatcgttacttcaccactgtctgtgtgaggttgctgctt
gagagcaaagaaaagaagatcagggaattcattcacgactttcagcagctcacagcagct
gatgataaaactgctcaggtagaagattttctgcagttcctctatggcgcgatggctcag
gacgtcatatggcagaacgcgagcgaggagcagcttcaggacgcccagctggccatcgag
cgcagtgtgatgaatcggattttcaagcttgctttctaccctaaccaggacggtgacata
ctgcgtgaccaggttcttcatgaacatattcagagactgtctaaagtagtgactgcaaat
cacagagctcttcagataccagaggtttatcttcgggaagccccttggccatctgcacag
tcggaaatcaggacaataagtgcttacaagaccccccgggacaaagtgcagtgtatcctg
cgaatgtgctccaccatcatgaacctcctgagtctggccaacgaggactccgtccccgga
gcagatgacttcgtgcctgttttggtatttgtgttgataaaggcaaatccgccctgcttg
ctatccactgtccagtatatcagtagcttttacgccagctgtctgtctggagaggaatcc
tattggtggatgcagttcacagcagcagtggaattcattaaaactattgatgaccgaaag
tga
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