Neogale vison (American mink): 122917277
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Entry
122917277 CDS
T08764
Symbol
RC3H2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nvs03000
]
122917277 (RC3H2)
04121 Ubiquitin system [BR:
nvs04121
]
122917277 (RC3H2)
Transcription factors [BR:
nvs03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
122917277 (RC3H2)
Ubiquitin system [BR:
nvs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122917277 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-CCCH_UNK
zf-C3HC4_4
Xin
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
122917277
NCBI-ProteinID:
XP_044120896
UniProt:
A0A8C7EKA0
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Position
9:11723865..11775406
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AA seq
1189 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQSIKLSNLGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAVSPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKINATVRTFPLLNKVGVNNTVTTTAGNVISVI
GSSETTGKIVPSTNGISNSENSVSQLIPRSTDSTLRALETVKKVGKVGTNGQNATGPSAE
SVTENKIGSPPKTPVSNVAATSAGPSNVGTELNSVPPKSSPFITRVPVYPQHSENIQYFQ
DPRTQIPFEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSSNVPESSLPPASMPYADHYST
FSPRDRMSSSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPPMYQRDDIIRSNSLPPM
DVMHSSVYQTSLRERYNSLDGYYSVACQPPSEPRTNVPLPREPCGHLKTSCEEQIRRKPE
QWAQYHTQKAALVSPTLPVATQSPTPPSPLFSVDFRTDFSESVSGTKFEEDHLSHYSPWS
CGTIGSCINAIDSEPRDVIANSNAVLMDLDSGDVKRRVHLFETQRRTKEEDPIIPFSDGP
IISKWGAISRSSRTGYHTTDPVQATASQGSATKPISVSDYVPYVNAVDSRWSSYGNEATS
SAHYIERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLDE
GRHLSLNLLSKEIELRNGESDYTEDTSDTKPDRDIELELSALDTDEPDGQAEQIEEILDI
QLGISSQNDQLLNGTPVENGHPVQQHQKEPLEQKRQSLGEDHVILEEQKTILPVTSCFSQ
PLPVPISNASCLPITTSVSVGNLILKTHVMSEDKNDFLKPVANGKMVNS
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcaatggacagaatttctgtcctgtccaatctgctataatgaa
tttgatgagaatgtgcacaaacccataagtttaggttgttcacacactgtttgcaagacc
tgcttgaataaacttcaccgaaaagcttgtccttttgaccagactgccatcaacacagac
attgatgtgcttcctgtcaacttcgcacttctccagttagttggagcccaggtaccagat
catcagtcaataaagttaagtaatctaggtgagaataaacactatgaggttgcaaagaaa
tgtgttgaggatttggcactctacttgaaaccactaagtggaggtaaaggtgtagctagt
ttgaaccagagtgcactgagccgtccaatgcaaaggaaactggtgacccttgtaaactgt
caactggtggaggaagaaggtcgtgtcagagcaatgcgagcagcccgttcacttggagaa
agaactgtaacagaactaatattacagcaccagaatccccagcaattgtctgccaacctg
tgggctgctgtcagggctcgaggatgccagtttctggggccagctatgcaagaagaggcc
ttgaagctggtattgctagcattagaagatggttctgctctctcaaggaaagtactggta
ctttttgttgtgcaaagactagaaccaagatttcctcaggcatcaaaaacaagtattggt
catgttgtgcaactactgtatcgagcttcatgtttcaaggttaccaaaagggatgaagac
tcttctttgatgcagctaaaggaagaatttcggagttacgaagcattacgcagagaacat
gatgcccagattgttcatattgctatggaggcaggactccgtatttcacccgagcagtgg
tcctcacttctgtatggtgacttggcacataaatcacacatgcagtctatcattgataag
ctgcagtctccagaatcatttgcaaagagcgtccaggaattgacaattgttttgcaacgg
acgggtgacccagctaacttaaatagactgaggcctcatttagaacttcttgcaaacata
gaccctaatccagatgctgtttcgccaacttgggagcagctagaaaatgcaatggtagct
gttaaaacagtggttcatggccttgtggacttcatacaaaattatagtagaaaaggccat
gagacacctcagcctcaaccaaacagcaaatacaagactagcatgtgccgagatctgcgt
caacaaggagggtgtccccgaggaacaaactgtacttttgcccattctcaggaagagctt
gaaaagtatcgattaaggaacaaaaagatcaatgcaactgtaagaacatttcctcttcta
aataaagttggtgtaaacaacactgtcacaaccacagccggaaatgtcatttctgtcata
ggaagttctgaaacaacggggaaaattgttccaagtacaaacggaatttcaaattcagaa
aacagtgtttcccagctaatcccacgtagtactgacagtacattaagagctctggagact
gtgaagaaggtggggaaggttggcactaatggtcagaatgctactgggccttctgcagag
tctgtcactgaaaataaaattggctctccacccaagactcctgtaagtaatgtagcggct
acctcagctgggccttctaatgttggaacagagctgaattctgtgcctccaaaatccagc
ccatttataactagagtaccagtatatcctcagcattctgaaaacattcagtattttcaa
gatccaaggactcaaataccctttgaagtcccacagtacccacagacagggtactaccca
ccacctccaacggtaccagctggtgtggctccctgtgttcctcgctttgtgaggtccagt
aatgttccagagtcctccctcccacctgcttctatgccatatgccgatcattacagtaca
ttttcccctcgagatcgaatgagttcttctccttaccagccgcctcctccgcagccatat
ggaccagttcccccagtaccttctggaatgtatgctcctgtgtacgacagcaggcgcatc
tggcgcccacctatgtaccaacgagatgacattattagaagcaattctttacctccaatg
gatgtgatgcactcgtctgtttatcagacgtctttgcgagaaagatataactcattagat
gggtattattccgtggcttgtcagccaccaagtgagccaaggacaaatgtgcctttacca
agggaaccttgtggtcatttgaagaccagttgcgaggagcagataagaagaaagccagag
cagtgggcacagtaccacactcagaaagcagctcttgtctctccaactcttcctgtggca
acacagtcaccaacaccaccttctcctctattcagtgtagactttcgcactgatttctct
gagagtgtgagtggtacaaaatttgaagaagatcatctttctcactattctccttggtct
tgtggcaccataggctcctgtataaatgccatcgattcagagcccagagatgtaattgct
aattcaaatgctgtattaatggacctggacagtggagatgttaagagaagagtgcattta
tttgaaacccagagaagaacaaaagaagaagacccaataattccatttagtgatggacct
atcatctcaaaatggggtgcaatttccagatcttcacgaacaggttaccataccacagat
cctgtccaggccactgcttcccaaggaagtgccactaagcctatcagtgtatcagattat
gttccttatgtcaatgctgttgattcaaggtggagttcatatggtaatgaggccacatca
tcagcacactatattgaacgggacagattcattgttactgatttatctggtcatcgaaag
cattccagtactggagaccttttgagcattgaacttcagcaggccaagagtaactcactg
cttcttcagagggaggccaatgctctggccatgcaacagaagtggaattccctggatgaa
ggccgtcaccttagcttaaatcttctaagcaaggaaattgaactgagaaatggagagagt
gattatacagaagatacaagcgatactaagcctgatagggatattgagttagagctttcg
gcacttgatactgatgaacctgatggacaggctgaacagattgaagagatcctggacata
cagcttggtatcagttctcaaaatgatcagttgctgaatggaacaccagtggaaaatggg
catccagtccagcagcaccaaaaggagccgctggagcagaagagacagagtttaggtgaa
gaccatgtgattctggaggagcaaaaaacaattctgccggtaacttcttgctttagccag
ccactcccagtgcccattagcaatgcaagttgcctccccatcaccacgtctgtcagtgtt
ggcaacctcattctgaaaactcatgttatgtctgaagataaaaacgactttttaaaacct
gttgcaaatgggaagatggttaacagctga
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