Neogale vison (American mink): 122917568
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Entry
122917568 CDS
T08764
Symbol
FOCAD
Name
(RefSeq) focadhesin
KO
K27498
focadhesin
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvs03019
]
122917568 (FOCAD)
Messenger RNA biogenesis [BR:
nvs03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
122917568 (FOCAD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Focadhesin
DUF3730
Motif
Other DBs
NCBI-GeneID:
122917568
NCBI-ProteinID:
XP_044121527
LinkDB
All DBs
Position
9:complement(47958705..48269778)
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AA seq
1805 aa
AA seq
DB search
MSDDIRKRFEFPNSLIQSQAVGHLIAAVLKENGFSEKIHQSTNQTPALNLLWEKCCSDNV
VVRTGCCEGLVALVAQDHAEFGYVLNGILNLMPSTRNTHGLITAIMKLLQMQAFKEGQGG
EKNIRNLYTIRNHPQPLITMLEHRPDCWPVLLQQLTAFFQQCPERSEVSCIQIMAPFLWY
LYCEPSQLQEYAKLRLTLLKVLLQPRVPGDPEQPSVLEQQILQLCCDMVPCLQVKDLIQT
TEVMLFIEEVYLSLLRHPIFWKIQLTQLTLQLLCFCEVSLTITGECSSLIHLLEHSVELL
KEDFPVEPVTVGIAFLLLQTPASQQKPILSLALKLLSVAEGQKIPRSALVLVMPLLQILS
STALEDCMSVDEEGPSRQQLALNLLEMVQQESYRDDHQKLSYKLAFPITSMYGSIFTAWR
ILEVMREESAASDWLFSVESLLPITTVIPVHVFLLLAHLLVEDQGQNLRQILKVTTLLAQ
ADSSQVPNLIPVLMFKLGRPLEPVLYNDILYTLPTLGVHKVCIGQILRVIQLLGTTPQLR
PVTLRLLTTLWEKQDRVYPELQRFMAMSDVPSLSVGKEVQWEKLIAKAASIRDICKQRPY
QHGADMLAAVSQVLNECTKSDQATPAALVLQGLHALCQAEVVCIRSTWNALSPKLSCDTR
PLILKTLSELFSLVPSLTVNTAEYENFKVQVLSFLWTHTQNKDPVVANAAYKSLSHFSAG
EHTILHLPEEIRPEIPTPDELDEDENDEGDEKDVDLSIPGSCYLRLLSLTAPLVLPALEE
FFTSLVKQEMVNMPRGVYHSALKGGPRSDQGKTVAGIPNFILKMYETNKQPGLKPGIAGG
MLFCYDVSTYQSKDGKPLNRLMASRGRSFKQTSLALVHEVQIQLSEWHRAIFLPQAWLAF
MSRAYHAILQGRSGELDLQLKHGKEGPEEVQYKKVTAWLWVRDMLTEEITKAAAKESPVV
KGNALLALSSLAVVVSKHEASLSSDSEGVPEVQPNFLSMKEWVSMVSDTLLVIVDSHYQP
RGQVFSSFYYKSYSGENTASAIARSAAATALSLLVPVFIISCKEKVEEILNMLTARLPGK
PRADESQAVQIHMGLALGMFLSRLCEEKLSDISGQQMNLLLMKSLDALENCCFDPSLEYN
TGCILGVGLVLSLMSHSSQTESRVHVAASLRKLSTYLDDSGSQSRTFQEVLAYTLSCVCT
SAFSTGIIEAAEAEDIMNKLRMLVENNQQTSGFALALGNLVHGLSVCGHGKAEDLGHRLL
PAWIRTVLAQGTPTMLCLAALHGMVALVGSEGDVMQLKSEAIQSSHFQARLNEVIKTVTQ
VISVSGVIGLQSNALWLLGHLHLSTLSSSQSRTSVPTDYSYLPESSFIRAAIGFFVTGGK
KGPESVPPSLLKVVMKPIAAVGESYQYPPVNWAALLSPLMRLNFGEEIQQLCLEIMVTQA
QSSQNAAALLGLWVMPPLIHSLSVNIKKYLLVSTPLWVKHVSDEQIQGFVENVMVPIFRA
ASPPAQAELRASALQGLGQAMKLPSPTHHLWSLLSEATGNIFDLLPNKIRRNDLELYVSV
AKCLSEMTDDEANRVVQITESSLEKAAFVRLYLVSQGRFPLMGLMEILSAAVQHQEKDTL
AWMVLQSLYQARITSHANTGVLKRMEWLLELMGYIRNVAYQSTSVQNVALDEAVDFLLLL
FAAAVVTWADHAAPLLLGLSASWLPWHRGNGPAGSASSFLGRSPVHRVTLQEALTLLPSS
MPLLLQKEPWKEQTQKFIDWLFSIMESPKEGLSAKSRDLLKATLLSLRVLPEFKKKAVWT
RAYGW
NT seq
5418 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgatatcaggaaaaggtttgaatttccaaattctcttatccaatcacaggct
gtgggtcatcttattgctgcagtcctgaaggaaaatggtttttcagaaaagatccaccaa
tcgacaaaccagactccagctttgaacttactgtgggagaagtgttgcagtgataatgtg
gtggttcgaactggctgctgtgagggcctggtggcccttgtcgctcaggatcacgcagag
tttggctatgtgctcaatgggatactcaacctgatgccatcgaccaggaatacacatggc
ctgataacagccattatgaaattattacaaatgcaagcttttaaggaaggacaaggaggg
gagaagaatattcggaatttgtatactattagaaatcatcctcagcctttgatcacgatg
cttgaacacagacctgattgctggccggtacttttgcagcagctgacggcatttttccag
caatgccctgaaaggtctgaagtttcgtgtatccaaataatggcaccatttctatggtat
ctctattgcgaaccatcccagttacaagaatacgctaaactgcgcctaacgctgctgaaa
gtcttacttcaaccccgggttcctggtgacccagagcaaccatcagtcttggaacaacag
atacttcagctgtgttgtgacatggttccgtgtttgcaggtaaaagatttgatccagaca
acagaagtgatgctgtttattgaggaagtatatttaagcttactgcgtcatcccattttc
tggaaaattcagcttacccagctgaccctgcagctgctgtgtttttgtgaagtcagccta
acgataactggggaatgctcatctttaattcaccttttagagcacagtgttgaacttttg
aaggaggattttcctgttgaaccggtcacagttggaatagctttcttactgctgcagaca
ccagcaagtcagcagaagccaatcctaagtttagctttgaagctcctctctgttgccgag
ggtcagaaaatcccaaggtcagccttggtgctagtgatgccgcttctgcagatactgtct
tctactgccttggaagactgtatgtccgtggatgaagaaggtccctcgaggcagcagttg
gctctgaaccttttggaaatggtacagcaggagtcctatagagatgaccaccaaaagctc
tcctacaagcttgctttccccataaccagcatgtatggatcaatatttacagcctggagg
atccttgaagtaatgagagaagagtctgcggccagtgactggctgttttccgtagagtcc
ttgctccctattactacagtgatccctgtgcatgttttccttctgttggctcacctcctt
gttgaagatcaaggacaaaatcttcgccagatactgaaggtcactacattattagcccaa
gcagattcttctcaggtaccgaatctgattccggttttaatgttcaaattgggaagaccg
ctggaacccgtattatataatgacatcttgtatactttacctacacttggtgttcacaag
gtgtgtataggacaaattctacgagtgatccaacttcttggaaccactccacaactaaga
cctgtcactctgcgcttgttgacaactttgtgggaaaagcaggatcgtgtctaccctgaa
ctgcagcgtttcatggccatgtccgatgtgccttctctgtccgtgggcaaggaagtccag
tgggaaaaactcattgccaaagcagcatcaatcagagacatatgtaagcaaaggccctac
cagcatggtgcagatatgttggcagccgtttcccaggtgttgaacgagtgcaccaagtct
gatcaagccactccggcagctttggtgctccaaggtcttcacgcgctctgccaagcggag
gtcgtttgcattcgctccacttggaacgcgctgtccccgaagctcagctgcgacacaaga
cctctcattctgaagaccctcagtgaactgttttctctcgttccttccttaaccgtcaac
acagctgaatatgagaattttaaagttcaagtcctcagcttcctctggacccacactcaa
aacaaggacccagttgtagccaatgccgcgtataaatctctgtcacacttcagtgcggga
gagcacaccattcttcatctgcctgaagagataagaccagaaatccccactcccgatgag
ctagatgaagacgaaaatgacgagggtgacgaaaaagatgtggatctttctattcctggc
tcttgctatctcagactgttgtcacttactgctcctttggttttaccagccttagaggaa
ttttttacatctcttgtgaagcaggaaatggtaaatatgccccgtggagtctatcactct
gcattaaaaggaggtccccggtccgaccaaggaaaaactgtagcagggatccccaatttt
atattgaagatgtatgagaccaataagcagccaggtttgaaacctggcattgcaggtggt
atgttattttgttacgatgtttcaacctatcagagtaaagatggcaaacctttgaatcga
ctgatggccagtagggggcgaagtttcaaacagacctcactcgctctggtacatgaggtt
cagatccagctttccgagtggcaccgggcgatttttctgccccaggcctggcttgccttt
atgagtcgagcttatcatgccattttacagggcaggagcggagagttggacttgcagctg
aaacatgggaaggaaggacccgaggaggtgcagtacaaaaaagtcaccgcctggctctgg
gtccgagacatgttgacggaggagatcaccaaggcggcggccaaggagagcccagtggtc
aagggcaacgcgctgttagccttaagcagcctcgctgtggtcgtatccaaacacgaagcc
agcctttcctcagactcggagggggtcccggaggttcagcccaatttcctttcaatgaag
gagtgggtttccatggtgtcggatacactcctggtcattgtggatagccattaccaaccc
agaggccaagttttctcctcattttattataaatcctattctggtgaaaacacagcaagc
gcgatcgcccgctccgctgccgccacggctttgtctctcctcgtgcccgttttcattatt
tcttgcaaagagaaggttgaggaaatcctgaacatgctgactgccaggttacctgggaaa
ccgagagctgatgagtctcaagccgtgcagatccacatgggcctggctttggggatgttt
ctctctcgcttgtgtgaggagaagctcagtgatatatctggccaacagatgaacctcctt
ctgatgaagtctctggatgccctggaaaattgctgctttgatcctagtcttgaatataac
acgggctgtatattgggagttggacttgttctgtctctcatgagccacagcagccagaca
gagtcccgagttcacgtggcagcatcgcttcggaagctctcaacgtacctagatgacagt
gggagccaaagcagaacatttcaggaggtccttgcttataccctcagctgtgtatgtacc
tcagcgttcagtaccgggatcattgaggctgcggaggctgaagatatcatgaacaagctt
cggatgttggtagaaaacaaccaacagacttcaggttttgccctggcgttgggaaacctg
gttcatggtttgtctgtatgcggacatggaaaagctgaggacttgggccacagactgctc
cctgcttggatcagaactgttctagcacagggcactcccacaatgctttgcttggcggca
cttcatggcatggtggccttggtaggctctgaaggggacgtaatgcagctgaagtcagaa
gccatccagtcctctcattttcaagcccgactcaatgaagtcattaaaactgtaactcag
gtcatcagtgtgtctggggtgattggtcttcaatcaaatgctctctggcttctaggacat
cttcatctgtctactctgtcctcaagtcagagcagaacctctgttcctactgactatagc
tatttgcctgagagcagttttattagagcggccattggcttcttcgtcacaggagggaaa
aaaggtcccgagtctgtgcctccttcccttctcaaagtcgtgatgaaacccattgcagct
gtcggagaaagctaccagtatcctcctgtgaactgggccgcactcctctctccacttatg
aggctaaacttcggggaagagatccagcagctgtgccttgaaattatggtgacacaggcg
cagtcctcccagaatgcagctgcgctcttgggactgtgggtgatgccacccctgatccac
agtttgagcgtgaatatcaagaagtacctcctggtgtccacgcctctgtgggtaaaacat
gtctctgacgaacagatccagggcttcgttgaaaatgtgatggtgcccatttttagagca
gcttccccgcctgcccaggctgagttgcgcgcgagtgccctgcaggggctgggtcaggcc
atgaagctgcccagccctacccaccacctctggagtctgctctctgaagctacgggaaac
attttcgaccttctgccaaataagattcggagaaatgatctagagctgtatgtcagtgta
gcaaaatgcctctcagaaatgacagatgatgaagccaatcgggttgtccagattacggag
agcagcctagaaaaggctgcctttgtcagactgtacttggtgtctcaaggacgattcccc
ttgatgggcttgatggagatcctcagcgcggccgtccagcaccaggagaaagacactctg
gcgtggatggtactgcagagcctctaccaggctcgaatcacaagccacgccaacacaggt
gtgttgaagagaatggaatggctcttggagctgatgggttatatcagaaatgttgcgtac
cagtcaacatctgttcagaacgtggctcttgatgaggctgtggacttcttgttgctgctc
ttcgccgccgcagtggtgacatgggcagaccatgcggccccgctcctcctcggcctcagt
gccagctggttgccatggcatcggggaaatggcccagctgggtcagcctcgagcttcctt
ggccggagtccagtgcacagggtcactctgcaggaggccctcactctccttcccagtagc
atgcctctcctgctgcagaaagaaccatggaaggaacagacccagaagttcattgactgg
ctcttcagcatcatggaaagccctaaagaaggcctctcagcaaaatccagggatctttta
aaagccaccctgctgtccttgagagttctcccagagtttaagaagaaagctgtgtggacc
agagcctatggttggtga
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integrated database retrieval system
