Neogale vison (American mink): 122917690
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Entry
122917690 CDS
T08764
Symbol
RORB
Name
(RefSeq) nuclear receptor ROR-beta isoform X1
KO
K08533
RAR-related orphan receptor beta
Organism
nvs
Neogale vison (American mink)
Pathway
nvs04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
122917690 (RORB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nvs03000
]
122917690 (RORB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
nvs03310
]
122917690 (RORB)
Transcription factors [BR:
nvs03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
122917690 (RORB)
Nuclear receptors [BR:
nvs03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
122917690 (RORB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
122917690
NCBI-ProteinID:
XP_044121821
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Position
9:complement(86569850..86761053)
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AA seq
460 aa
AA seq
DB search
MNTAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNR
NRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQQQSGEAEALA
RVYGGGLSNGLGSLSGEAGGAYANGHVIDLPKSEGYYSVDSGQPSPDQSGLDMTGIKQIK
QEPIYDLTSVPNLFTYSSFNNGQLAPGITMTEIDRIAQNIIKSHLETCQYTMEELHQLAW
QTHTYEEIKAYQSKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGC
LEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSDDLVNEAFDFAKNLCSLQLTEEEI
ALFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKLIAKIPTITAV
CNLHGEKLQVFKQSHPDIVNTLFPPLYKELFNPDCATVCK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccgcacaaattgaagtgataccatgcaaaatttgtggcgataagtcctccggg
atccactacggagtgatcacgtgtgaaggttgcaagggattctttaggaggagccaacaa
aacaatgcctcttactcctgcccacggcagagaaactgtttaatcgacagaaccaacaga
aaccgttgccagcactgccgactgcaaaagtgtcttgccctaggaatgtcgagagatgct
gtgaagttcggcaggatgtccaagaagcagcgggacagcctgtatgcggaggtgcagaag
caccagcagcggctgcaggagcagcggcagcagcagagcggggaggccgaggcgctggcc
agggtgtacggcggtggcctcagcaacggcctcggcagcctgagcggcgaggcggggggc
gcttacgccaacggacacgtcatcgacctgcccaagtccgagggttactacagcgtggat
tccggccagccatccccggatcaatctggacttgacatgactggaatcaaacagataaag
caagaacccatctatgacctcacgtccgtacccaacttgtttacctatagctctttcaac
aacgggcagctagcgccagggatcacgatgaccgaaatcgatcgaatcgcacagaacatc
atcaagtcccatctggagacgtgtcagtacaccatggaggagctacaccagctggcgtgg
cagacccacacctatgaagaaattaaagcctatcagagcaagtccagggaagcgctgtgg
cagcagtgcgccatccagatcactcacgccatccagtacgtggtggagttcgcgaagcgg
atcacgggcttcatggagctctgtcagaacgatcagattctacttctcaagtcaggttgc
ttggaagtggttttagtgagaatgtgccgtgccttcaacccattaaacaacactgttctg
tttgaaggaaaatatggaggaatgcagatgttcaaggccttaggttccgatgacctagtg
aatgaagcatttgactttgcaaagaatttgtgttccttgcagctgactgaggaggagatt
gctttgttctcatctgctgttctgatatctccagaccgagcctggctgatagaaccaagg
aaggtccagaagcttcaggaaaaaatttattttgcacttcagcacgtgattcagaagaat
cacctggatgatgagactttggcaaagttaatagccaagatccccaccatcacggcggtc
tgcaacttgcacggggagaagctgcaggtattcaaacaatcccatccagacatagtgaac
accctctttcctccattatacaaggagctctttaatcctgactgtgccaccgtctgcaaa
tga
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