Neogale vison (American mink): 122917738
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Entry
122917738 CDS
T08764
Symbol
VLDLR
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
nvs
Neogale vison (American mink)
Pathway
nvs05017
Spinocerebellar ataxia
nvs05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
122917738 (VLDLR)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
122917738 (VLDLR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nvs04131
]
122917738 (VLDLR)
Membrane trafficking [BR:
nvs04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
122917738 (VLDLR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
EGF
hEGF
Motif
Other DBs
NCBI-GeneID:
122917738
NCBI-ProteinID:
XP_044121901
LinkDB
All DBs
Position
9:94343119..94372823
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AA seq
804 aa
AA seq
DB search
MGTSARWALWLLLALCWAPRESRATGAGRRAKCEPSQFQCTNGRCITLLWKCDGDEDCAD
GSDEKNCVKKTCAESDFVCNNGQCVPSRWQCDGDPDCEDGSDENPEQCRNITCSPDEFTC
SSGRCISRNFVCNGQDDCSDGSDELACAPPTCSAHEFQCGTSSCIPLSWVCDDDADCSDQ
SDESLEQCGRQPVMHAKCPASETQCGSGECIHKKWRCDGDPDCKDGSDEVNCPSRTCRPD
QFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIEIGKVCNQE
QDCRDWSDEPLKECHVNECLVNNGGCSHICKDLVIGYECDCAAGFELIDKKICGDIDECQ
NPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPSLIFTNRRDIRKIGLERKEY
IQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHVKMIDNVYNPAAIAVD
WVYKTIYWTDVASKTISVATLDGTKRKFLFNSDLREPASLALDPLSGFVYWSDWGEPAKI
EKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVLKSL
EFLAHPLALTIFEDRVYWIDGENEAVYGANKFTGSELATLVNNLNDAQDIIVYHELVQPS
GKNWCEEDMPNGGCEYLCLPAPQINDHSPKYTCSCPNGYSLEDNGRECHRINVTTAVSEA
TVPPRSTSAAWAILPLLLLAMAAVGGYLMWRNWQHKNMKSMNFDNPVYLKTTEEDLSIDI
GRHSASVGHTYPAISVVSTDDDLA
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgtccgcgcgctgggcgctctggctgctgctcgcgctgtgctgggcgccccgg
gaaagccgcgccaccggagcgggaagaagagccaaatgtgaaccctcccaattccagtgc
acaaacggccgctgcattacgttgctgtggaaatgcgacggggacgaagactgcgctgac
ggcagcgacgagaagaactgcgtgaagaagacgtgtgccgagtcagactttgtgtgcaac
aatggccagtgtgtccccagccggtggcagtgtgacggggatcccgactgtgaagacggc
tccgatgaaaacccagaacagtgccgcaacatcacgtgcagccccgatgagttcacctgc
tccagcggccgctgcatctccaggaatttcgtctgcaacggccaggacgactgcagcgac
ggcagcgacgagctggcatgcgcgccccccacgtgcagcgcgcacgagttccagtgcggc
acctcgtcctgcatccccctcagctgggtgtgcgacgacgacgccgactgctccgaccag
tccgacgagtcgctggagcagtgcggccgccagcccgtgatgcacgccaagtgcccggcc
agcgagacccagtgcggctccggcgagtgcatccacaagaagtggcgctgcgacggggac
cccgactgcaaagacggcagtgacgaggtcaactgtccttcgcgcacctgccgccccgac
cagttcgagtgcgaggacgggagctgcatccacggcagccggcagtgcaacggcatccgg
gactgcgtggacggctcggacgaggtcaactgcaaaaacgtcaatcagtgcttgggcccc
ggcaagttcaagtgcagaagtggggagtgcatagaaatcggtaaagtatgtaaccaggag
caggactgcagggactggagtgacgagcccctgaaagaatgtcatgtaaacgaatgcttg
gttaataatggcggctgttctcacatctgcaaagacctcgtgataggctacgaatgtgat
tgcgccgctgggtttgaactgatagataagaaaatctgcggagatattgatgaatgccaa
aaccccggaatctgcagccagatttgcatcaacttaaaaggtggttataagtgtgaatgt
agtcggggctatcagatggaccttgccactggcgtgtgcaaggcagtaggcaaagagcca
agtctgatcttcacgaatcgaagagacatccggaagattggcttggagaggaaggaatat
atccaactagtggaacagctaagaaacactgtagcgcttgatgcggacattgctgctcag
aaactgttctgggctgatctaagtcagaaggccatcttcagtgcctccatcgatgacaag
gttggcagacatgttaaaatgatcgacaatgtctataatcctgcagccatcgctgttgat
tgggtgtacaaaaccatctactggactgatgtggcctctaagactatttcagtagctacc
ctggatggaaccaagaggaagttcctgtttaactcggacttgcgggaacccgcctccctc
gctctggacccactgtctggctttgtgtactggtcagactggggagaaccagctaaaata
gaaaaagcaggaatgaatggatttgataggcggcccctggtgacagtggacatccagtgg
cctaatggaattacacttgaccttataaagagtcgtctctactggcttgactccaagttg
cacatgttgtccagtgtggacttgaatggccaagaccgcaggattgtcctcaagtctctg
gagttcctagctcaccctctcgcgctgaccatatttgaggatcgtgtctactggatagat
ggagaaaatgaagccgtctacggtgccaataaattcactgggtcagagctggccactctg
gtcaacaaccttaatgatgcccaagacatcattgtgtatcacgaactcgtgcagccgtca
ggtaaaaactggtgtgaagaagacatgcccaacggaggctgtgaatacctgtgcctgccg
gccccacagattaacgatcactctccgaagtacacctgttcctgtcccaacgggtacagt
ctggaggacaacggccgggagtgccacaggatcaatgtgaccacagcggtatctgaggcc
actgtccccccgagaagcacttctgctgcctgggccatccttcctctcttgctcttggca
atggcagcagtaggtggctacttgatgtggcgaaattggcagcacaagaacatgaaaagc
atgaactttgacaatcctgtgtacttgaagactactgaagaggacctgtcaatagacatt
gggagacacagtgcttctgttggacacacgtacccagcaatatcagttgtaagcacagat
gatgacctagcttga
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