Neogale vison (American mink): 122918294
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Entry
122918294 CDS
T08764
Symbol
SMG5
Name
(RefSeq) protein SMG5 isoform X1
KO
K11125
protein SMG5
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122918294 (SMG5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvs03019
]
122918294 (SMG5)
03032 DNA replication proteins [BR:
nvs03032
]
122918294 (SMG5)
Messenger RNA biogenesis [BR:
nvs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
122918294 (SMG5)
mRNA cycle factors
Common to processing body (P body) and stress granule
122918294 (SMG5)
DNA replication proteins [BR:
nvs03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
122918294 (SMG5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Motif
Other DBs
NCBI-GeneID:
122918294
NCBI-ProteinID:
XP_044122505
LinkDB
All DBs
Position
10:complement(1991225..2015904)
Genome browser
AA seq
1020 aa
AA seq
DB search
MGELGREEVSSPAGTQSLSQQARNRGDLATTQAVVEAVHRLDLILCNKTAYQEVFKPENI
SLRNKLRELCVKLMFLHPVDYGRKAEELLWRKVYYEVIQLIKTHKTHIHSRSALECAYRT
HLVAGIGFYQHLLLYIQSHYQLELQCCIDWTHVTDPLIGCKKPVSASGKEMDWAQMACHR
CLVYLGDLSRYQNELAGVDTELLAERFYYQALSVAPQIGMPFNQLGTLAGGKYYNVEAMY
CYLRCIQSEVSFEGAYGNLKRLYDKAARMHHQLKKCETRKLSPSKKRCKDIKRLLVNFMY
LQSLLQPRSGPVDSELTPLCQSVLEDFNLCLFYLPSSAGLSLASEGEEDYEGGYAFVPDL
LVFQMVIICLMGVHSLKRAGSKQYSAAIAFTLALFSHLVNHVNIRLQAELEEGENAGPAF
QSEGTGADEPLEKEEVPGPEPPPTAPPAGEVRKSRKFSRLSCLRRRRHPPKAGDDSDLSE
GFESDSSHDSARASEGSDSGSDKSLEGGGTAFDAETDSEMNSQESRSDLEDMEDEEGTRS
PVPEPARPRSEAPESLNGPLGPSEASIASNLQAMSTQMFQTKRCFRLAPTFSNLLLQPPA
EAHAMASCRPCVNGDADKPSEPASEEGSESEGSESSGRSCRNERSVQEKLQVLAAEGLLP
AVKVFLDWLRANPDLIVVCAQSSQSLWNRLSVLLNLLPAAGELRESGLALCPEVQDLLEG
CELPDLPSSPLLPEDTALRNLPPLRAAHRRFNFDADRPLLSALEESVVRTCCIRSFGHFV
ARLQGSVLQFSAEAGIFVSIAQSEREGVLQQAQAQFRMAQEEARRNRLMRDMAQLRLQLE
VSQLEGSLQQPKAQSAMSPYLVPDTQALCHHLPVVRQLAASGRFIVIIPRTVIDGLDLLK
KEHPGARDGIRYLEAEFKKGNRYIRCQKEVGKSFERHKLKRQDADAWTLYKILDSCKQLT
LAQGAGEEDPSGMVTVITGLPLDNPRVLSGPVQAALQAAAHASVDVKNVLDFYKQWKEIG
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgggagaactgggacgcgaggaagttagctcccccgccggcacccagagcctgtcacag
caagcgaggaatcgaggagaccttgcgactacgcaggccgtggtggaggctgtgcatcga
cttgacctcatcctttgcaacaaaaccgcttatcaggaggtgttcaaaccagagaacatt
agcctgaggaacaagctgcgcgagctgtgcgtcaagcttatgttcctgcacccagtggac
tatgggaggaaggccgaggagctgctttggaggaaggtgtactatgaagttattcagctc
atcaagactcacaagacgcacatccatagccggagcgccttggagtgtgcctaccggacg
cacttggtcgctgggatcggcttctaccagcatctgcttctctatatccagtcccactac
cagctggaacttcagtgctgcatcgattggacccatgtcaccgaccccctcataggatgc
aagaagccagtgtctgcgtcagggaaggagatggactgggcacagatggcgtgccaccgg
tgtctcgtgtacctgggggatttgtcgcgttatcagaatgaattagccggcgtagacacc
gagctgctagccgagagattttactaccaagccttgtcagtagctccccagattgggatg
cccttcaaccagctgggcacgctcgcaggtggcaagtactacaatgtggaggccatgtac
tgctacctgcgctgcatccagtcggaggtgtccttcgagggggcctatgggaatctcaag
cggctgtacgacaaggcagccagaatgcaccaccagctgaagaagtgcgagactcggaaa
ctctcccccagcaagaagcggtgcaaagacatcaagaggttgctggtgaacttcatgtac
ctgcagagcctcttgcagcccaggagcggcccagtggactcggagctgacgccgctctgc
cagtcagtgctggaggacttcaacctctgcctcttctacctgccctcgtccgccggcctc
agcctggccagcgagggcgaggaggactacgagggtggctatgctttcgtcccggacctc
ctcgtctttcagatggtcatcatctgtctcatgggcgtgcacagcttgaagagagcaggg
tccaagcagtacagcgcagccattgccttcacgctggcgctcttctcgcacctcgtcaac
cacgtcaacatacggctgcaggcggagctggaggagggcgagaacgccgggcctgcattc
cagagcgagggcacaggtgcagatgagcccttggagaaggaagaggtgccaggccccgag
ccccctcccacagcacctccagcgggtgaggtcagaaagagtcggaaattttcccgtctc
tcctgcctccgccgccgccgccacccacccaaagcaggagatgacagtgacctgagcgaa
ggctttgaatcagactccagccacgactctgccagggccagcgagggctcggacagtggc
tctgacaagagtctcgaaggtgggggaacggcctttgatgccgagacagactcagaaatg
aacagccaggagtcccggtcagacctggaagacatggaggacgaggaggggacgcgatcc
ccagtcccagagcctgctcggcccaggtcagaggctcccgagtctctcaatggccccctg
ggccccagtgaggctagcattgccagcaacctgcaagccatgtccacccagatgttccag
accaagcgctgcttccgactggcccccaccttcagcaatctgctcctccagcccccggcc
gaagctcacgccatggccagctgcaggccctgcgtcaacggagatgcggacaagccctca
gagccagcctccgaggagggctccgagtcggaaggcagtgagtccagcgggcgctcttgt
cggaacgagcgcagcgtccaggagaagctgcaagtcctggcggctgaaggcctgcttccc
gccgtgaaggtcttcctggactggctgcgggccaaccctgacctcatcgtcgtgtgtgcg
cagagctctcagagtctgtggaatcgcctgtctgtgttgctgaacctgttgccagctgct
ggcgagctccgggagtctggcctggccctgtgtcctgaggtccaagaccttcttgaaggt
tgtgaactgcctgacctgccctccagcccgctgctcccagaggacacggcccttcgtaac
ctgccgcctctccgggcggcccatcgacgctttaactttgacgcggatcggcccctgctt
agcgccttggaggagtcggtggtgcgcacctgctgcatccgcagcttcgggcacttcgtg
gcccgcctgcaaggcagcgttctgcagttcagcgcggaggccggcatcttcgtcagcatc
gcgcagtcggagcgggagggcgtgctgcagcaggcgcaggcgcagttccgcatggcgcag
gaggaagcccgtcggaacaggctgatgagagacatggcccagctgcggcttcagctcgag
gtctctcagctggaagggagcctgcagcagcccaaggcccagtcagcaatgtctccctac
ctcgtcccggacacccaggccctctgccatcacctcccggtcgtccgccagctggccgcc
agcggccgcttcattgtcatcatcccgaggacagtgatcgatggcctggacttgctgaag
aaggagcacccaggggcccgggacgggatccggtacctggaggcggagtttaagaaggga
aacaggtacattcgctgccagaaagaggtggggaagagcttcgagcggcacaagttgaag
cggcaggacgcagacgcctggaccctgtataagatcctggacagctgcaaacaactgact
ctggcccagggggcgggtgaggaggaccccagcggcatggtgaccgtcatcacaggcctt
ccgctggacaacccccgtgtgctctcaggccctgtgcaggcagccctgcaggccgctgca
cacgccagtgtggacgtcaagaatgttctggacttctacaagcagtggaaggagattggt
tga
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