Neogale vison (American mink): 122918349
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Entry
122918349 CDS
T08764
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nvs04131
]
122918349 (COPA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nvs04147
]
122918349 (COPA)
Membrane trafficking [BR:
nvs04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
122918349 (COPA)
Exosome [BR:
nvs04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122918349 (COPA)
Exosomal proteins of bladder cancer cells
122918349 (COPA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_RFWD3
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
122918349
NCBI-ProteinID:
XP_044122617
LinkDB
All DBs
Position
10:complement(4915698..4962216)
Genome browser
AA seq
1224 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDAESITLFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHAIVICNRKLEALCNIHENIRVKSGAWDESGV
FIYTTSNHIKYAVTTGDYGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFK
LALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEI
ALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDRLSFLYLITGNLEKLRKMM
KIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDP
EKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGKGGALAADIDIDTV
GTEGWGEDAELQLDEDGFVEAAEGLGDDGLGKGQEEGGGWDVEEDLELPPELDIPPGAAG
GAEDGFFVPPTKGTSPTQIWCSNSQLPVDHVLAGSFETAMRLLHDQVGVTQFGPYKQLFL
QTFARGRTTYQALPCLPSMYGYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQLCYQLTTVG
KFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMEIERKKLPKETLEQ
QKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQ
TRKILSACEKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFKGQI
CKVTTVTEIGKDVIGLRISPLQFR
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgctaaccaaattcgagaccaagagcgcgcgggtcaaagggctcagttttcaccccaaa
agaccttggatcctgaccagtttacacaatggagtcatccagttatgggactatcggatg
tgtacccttatcgacaagtttgatgaacatgatggtccagtacgaggcattgacttccac
aagcagcagccattgtttgtttctggaggagatgactataagattaaggtgtggaattac
aagcttcggcgctgtctcttcacattgcttgggcatttggactacattcgcaccacgttc
ttccatcacgaatatccctggattctgagcgcctcagatgaccagactatccgagtgtgg
aactggcagtctagaacctgtgtctgcgtgttaacaggacacaaccattatgtaatgtgt
gctcagtttcacccctcagaagacctggttgtgtcagccagcctggaccagactgtgcgt
gtttgggatatttctggtctaaggaaaaaaaacttgtcccctggtgcagtggagtccgac
gtgcgaggaataaccggcgtcgatctgttcggaacgaccgacgcggtggtcaaacacgtg
ctggagggtcatgatcgtggagtaaactgggctgccttccaccccaccatgccccttatt
gtctctggggcagacgaccgacaagtgaagatctggcgcatgaacgagtcaaaggcgtgg
gaggttgacacctgccgcggtcattacaacaacgtgtcttgtgccgtcttccatcctcgt
caagagctgatcctcagcaattcggaggacaagagcatccgagtctgggatatgtccaag
cggactggggttcagaccttccgtagggaccatgatcgtttctgggtcctagctgcccac
cccaatctgaacctctttgcggcaggccatgacggtggcatgattgtgtttaaactggag
cgggaacggccagcctatgccgttcatggcaatatgctacattacgtcaaggaccgattc
ttgcgtcagttggatttcaacagctccaaagacgtagccgtgatgcagttgcggagtggt
tccaagtttccggtgttcaacatgtcatacaatccagcagaaaatgcagtcctactgtgt
acgagagccagcaatttagagaacagtacctacgacctgtacaccatccccaaggatgcg
gactcccagaatcccgacgctccagaagggaaacgatcctcaggcctgacagccgtttgg
gttgctagaaatcggtttgctgtcctagatcggatgcattcgcttctgatcaagaatctg
aagaatgagatcaccaaaaaggtacaggtgcccaactgcgatgagatcttctatgccggc
acaggcaacctcctgcttcgagatgccgaatctatcacgctcttcgacgttcagcagaag
cggactctggcctcggtgaagatttctaaggtgaaatatgttatctggtcagcagacatg
tcccacgtagcactactggccaaacatgccattgtcatctgtaaccgcaaactggaggct
ctgtgtaacattcatgagaacattcgcgtcaagagtggggcctgggatgagagcggggtc
ttcatctataccacaagcaaccacatcaaatatgccgtcaccactggggactacgggatc
atccggactctggatttacccatctatgtcacgcgggtgaagggcaacaacgtgtattgc
ctggaccgggagtgtcgtccgcgggtgctcaccattgatcccacggagttcaagttcaaa
ctggctttgatcaacagaaaatacgacgaggtgctgcacatggtgaggaacgccaagcta
gtcggccagtccatcatcgcttacctccagaagaagggctacccagaagtggcactccat
ttcgtcaaggacgaaaagactcgctttagtctggcacttgagtgcggaaacattgagatt
gctctggaagcagccaaagcgctggatgacaagaactgctgggagaagctgggagaagtg
gccttgctacaagggaaccaccagattgtggaaatgtgttatcagcgcaccaaaaacttc
gacagactttccttcttgtaccttatcactggcaacctagagaagcttcgcaagatgatg
aagattgctgagatccggaaggacatgagtggccattatcagaatgccctctacctgggt
gatgtgtccgagcgggtccggatcctgaagaactgcgggcagaagtcactggcctacctc
acagctgctactcatggcttagatgaagaggctgagagcctgaaggagacatttgaccca
gagaaggagaccatcccggacattgaccctaatgccaagctgctccagcccccggcaccc
atcatgccgttggacactaactggcccttgctgactgtgtccaaaggcttctttgaaggc
tccattgccagcaagggcaaggggggcgcgctggctgccgacattgacatcgacactgtt
ggcaccgagggctggggagaggatgcagagctgcagctggacgaagacgggtttgtggag
gctgcagaaggtctgggggacgatggtcttggcaagggacaggaagaaggaggcggctgg
gatgttgaagaggacctggagctccctcctgagctggatataccccctggagcagcaggg
ggcgctgaggacgggttctttgtgccccccaccaagggaaccagcccgactcagatctgg
tgcagtaactcgcagcttcccgtcgatcacgtcctggccggctcttttgaaacagccatg
cggcttcttcacgaccaagttggggtcacccagtttggcccttacaagcagctgttccta
cagacctttgcccgcggccgtaccacctaccaggccctgccctgcctgccctccatgtat
ggctatcctaatcgcaactggaaggatgcagggctgaagaacggcgtgccggccgtgggc
ctgaagctgaatgacctcatccagcggctgcagctctgctaccagctcaccacagtgggc
aagtttgaggaggctgtggagaagttccgctccattttgctcagcgtgcctcttctcgtg
gtggacaacaaacaggagatcgcggaggcgcagcagctcatcaccatctgccgtgagtac
atcgtgggtctgtccatggagatagagaggaagaagctgcccaaagagactctggaacag
cagaagcgcatctgcgagatggcagcctacttcacccactcgaacctgcagccggtgcac
atgatcctggtgctgcggaccgccctcaacctcttcttcaagctcaagaactttaagaca
gctgccacctttgctcggcgcctcttggaacttgggcccaagccggaggtggctcagcag
acccgcaaaattctgtctgcctgtgagaagaaccccacagatgcctaccagctcaattac
gacatgcacaacccttttgacatctgtgctgcgtcctatcggcccatctaccgtggaaag
ccagtggagaagtgtccgctcagcggggcctgctattccccggagttcaagggtcaaatc
tgcaaggtcactacagtgacagagatcggcaaagacgtcattggtttaaggatcagtcct
ctgcagttccgctaa
DBGET
integrated database retrieval system
